RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 SFRP5Q5T4F7 317 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 CLEC10AQ8IUN9 316 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 ARHGEF39Q8N4T4 335 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 FIBCD1Q8N539 461 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 SYTL5Q8TDW5 730 aaPredicted RBP7.37□□□□□ -1.23
UPF3A-205ENST00000479712 BTN2A2Q8WVV5 523 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 FAM83CQ9BQN1 747 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 DSCC1Q9BVC3 393 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 MTFR1LQ9H019 292 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 NCOA5Q9HCD5 579 aaKnown RBP7.37□□□□□ -1.23
UPF3A-205ENST00000479712 GFOD1Q9NXC2 390 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 PRR13Q9NZ81 148 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 KCNH3Q9ULD8 1083 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 NOP58Q9Y2X3 529 aaKnown RBP7.37□□□□□ -1.23
UPF3A-205ENST00000479712 ABCC5O15440 1437 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 PTPRUQ92729 1446 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 DHX57Q6P158 1386 aaKnown RBP7.36□□□□□ -1.23
UPF3A-205ENST00000479712 LRRIQ1Q96JM4 1722 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 FOXN1O15353 648 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 KCNH1O95259 989 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 CBX7O95931 251 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 CHRNA4P43681 627 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 MASP1P48740 699 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 ANAPC15P60006 121 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 SUMO1P63165 101 aaKnown RBP7.36□□□□□ -1.23
UPF3A-205ENST00000479712 PABPC4Q13310 644 aaKnown RBP eCLIP7.36□□□□□ -1.23
UPF3A-205ENST00000479712 CBX2Q14781 532 aaPredicted RBP7.36□□□□□ -1.23
UPF3A-205ENST00000479712 NSMFQ6X4W1 530 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 NIM1KQ8IY84 436 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 DTWD2Q8NBA8 298 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 NINJ1Q92982 152 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 TBC1D32Q96NH3 1257 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 IER2Q9BTL4 223 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 PCDH12Q9NPG4 1184 aa7.36□□□□□ -1.23
UPF3A-205ENST00000479712 DIS3Q9Y2L1 958 aaKnown RBP7.36□□□□□ -1.23
UPF3A-205ENST00000479712 NALCNQ8IZF0 1738 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 NWD2Q9ULI1 1742 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 PLEKHG1Q9ULL1 1385 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 THSD7AQ9UPZ6 1657 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 PTPN23Q9H3S7 1636 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
UPF3A-205ENST00000479712 PLD2O14939 933 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 CAPNS1P04632 268 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 KIR3DL1P43629 444 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 TMC3Q7Z5M5 1100 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 MFSD3Q96ES6 412 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 Q96M66 194 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
UPF3A-205ENST00000479712 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
UPF3A-205ENST00000479712 GTF2IRD1Q9UHL9 959 aa7.35□□□□□ -1.23
UPF3A-205ENST00000479712 SF3B6Q9Y3B4 125 aaKnown RBP7.35□□□□□ -1.23
UPF3A-205ENST00000479712 RBAK-RBAKDNI3L0D1 243 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 IRS4O14654 1257 aaPredicted RBP7.34□□□□□ -1.23
UPF3A-205ENST00000479712 SIGLEC6O43699 453 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 RFPL3O75679 317 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 PRAMEF1O95521 474 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
UPF3A-205ENST00000479712 GRB10Q13322 594 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 IDI1Q13907 227 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 FNDC3BQ53EP0 1204 aaKnown RBP7.34□□□□□ -1.23
UPF3A-205ENST00000479712 GTF2IRD2BQ6EKJ0 949 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 OGFOD3Q6PK18 319 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 ZAR1Q86SH2 424 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 GTF2IRD2Q86UP8 949 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 DHX37Q8IY37 1157 aaKnown RBP7.34□□□□□ -1.23
UPF3A-205ENST00000479712 OSBP2Q969R2 916 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 ZDHHC15Q96MV8 337 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 MRPL4Q9BYD3 311 aaKnown RBP7.34□□□□□ -1.23
UPF3A-205ENST00000479712 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 C7orf69Q9H7B7 122 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 CHST7Q9NS84 486 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 KIAA1107Q9UPP5 1409 aa7.34□□□□□ -1.23
UPF3A-205ENST00000479712 NRAPQ86VF7 1730 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 RPRD2Q5VT52 1461 aaKnown RBP7.33□□□□□ -1.24
UPF3A-205ENST00000479712 DNAJC25-GNG10A0A024R161 153 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 HMX2A2RU54 273 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 MEIS1O00470 390 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 ADMP35318 185 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 TM4SF20Q53R12 229 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 CD163Q86VB7 1156 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 GATA6Q92908 595 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 NMRK2Q9NPI5 230 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 STOML1Q9UBI4 398 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 RAXQ9Y2V3 346 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 ADAMTS13Q76LX8 1427 aa7.33□□□□□ -1.24
UPF3A-205ENST00000479712 ZNF644Q9H582 1327 aaPredicted RBP7.32□□□□□ -1.24
UPF3A-205ENST00000479712 PXDNQ92626 1479 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 C1QTNF9BB2RNN3 333 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
UPF3A-205ENST00000479712 SNRPB2P08579 225 aaKnown RBP7.32□□□□□ -1.24
UPF3A-205ENST00000479712 VIL1P09327 827 aaKnown RBP7.32□□□□□ -1.24
UPF3A-205ENST00000479712 KCNJ6P48051 423 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 AMPD2Q01433 879 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 CYP27C1Q4G0S4 372 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 Q8N3U1 123 aa7.32□□□□□ -1.24
UPF3A-205ENST00000479712 MFSD4AQ8N468 514 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms