RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 SHANK3Q9BYB0 1731 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 HMGB1P1B2RPK0 211 aaPredicted RBP7.03□□□□□ -1.28
PSMD6-204ENST00000467853 EXOC5O00471 708 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 GSTO1P78417 241 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 C10orf76Q5T2E6 689 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 ANKRD40Q6AI12 368 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 ZNF444Q8N0Y2 327 aaPredicted RBP7.03□□□□□ -1.28
PSMD6-204ENST00000467853 PNMA1Q8ND90 353 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 MKNK2Q9HBH9 465 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 BMP2KQ9NSY1 1161 aaPredicted RBP7.03□□□□□ -1.28
PSMD6-204ENST00000467853 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
PSMD6-204ENST00000467853 SEC63Q9UGP8 760 aaKnown RBP7.03□□□□□ -1.28
PSMD6-204ENST00000467853 PCDHA6Q9UN73 950 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 PCDHA8Q9Y5H6 950 aa7.03□□□□□ -1.28
PSMD6-204ENST00000467853 AGPSO00116 658 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 PLCG1P19174 1290 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 EIF4A3P38919 411 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 DYNLL1P63167 89 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 DRP2Q13474 957 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 KDM7AQ6ZMT4 941 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 UNC13DQ70J99 1090 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 HEATR3Q7Z4Q2 680 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 CD302Q8IX05 232 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 GUF1Q8N442 669 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 MREGQ8N565 214 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 C3orf20Q8ND61 904 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 LRRC1Q9BTT6 524 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 GEMIN8Q9NWZ8 242 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 BARHL2Q9NY43 387 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 NIP7Q9Y221 180 aaKnown RBP eCLIP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 TOGARAM1Q9Y4F4 1720 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 ZC3H4Q9UPT8 1303 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 CASZ1Q86V15 1759 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 WNT7AO00755 349 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 ZMYND10O75800 440 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 ADAMTS2O95450 1211 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 SMARCA1P28370 1054 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 INF2Q27J81 1249 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 NAALADL2Q58DX5 795 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 NEK8Q86SG6 692 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 LRRC45Q96CN5 670 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 MYCBPQ99417 103 aaPredicted RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 DCP1AQ9NPI6 582 aaPredicted RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 GOLGA6L7A0A1B0GV03 622 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 CES2O00748 559 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 ZNF185O15231 689 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 MOCS3O95396 460 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 SERPING1P05155 500 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 MATR3P43243 847 aaKnown RBP eCLIP7.02□□□□□ -1.298e-7■■■■□ 20.4
PSMD6-204ENST00000467853 PMS1P54277 932 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 NAPAP54920 295 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 CYP27A1Q02318 531 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 TDRD12Q587J7 1177 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 SFMBT2Q5VUG0 894 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 CENPPQ6IPU0 288 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 BRINP3Q76B58 766 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 RRAGAQ7L523 313 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 YTHDF3Q7Z739 585 aaKnown RBP7.02□□□□□ -1.29
PSMD6-204ENST00000467853 TANGO6Q9C0B7 1094 aa7.02□□□□□ -1.29
PSMD6-204ENST00000467853 BAG3O95817 575 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 LDHCP07864 332 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 RDXP35241 583 aaKnown RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 GYG1P46976 350 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 FAM47AQ5JRC9 791 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 PDXDC1Q6P996 788 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 LRIG3Q6UXM1 1119 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 ADGRA1Q86SQ6 560 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 RRP36Q96EU6 259 aaKnown RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 GDAP1L1Q96MZ0 367 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 NAP1L4Q99733 375 aaKnown RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 CDCA7Q9BWT1 371 aaPredicted RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 CEP72Q9P209 647 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 PDE2AO00408 941 aaPredicted RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 TSPY3P0CV98 308 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 TSPY8P0CW00 308 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 MNAT1P51948 309 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 TFAP4Q01664 338 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 MTMR3Q13615 1198 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 PLCB4Q15147 1175 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 MIIPQ5JXC2 388 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 RUFY4Q6ZNE9 571 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 DRC1Q96MC2 740 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 CYP2D7A0A087X1C5 515 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 SLC26A4O43511 780 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 CCNT1O60563 726 aaKnown RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 HAUS3Q68CZ6 603 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 ARMC9Q7Z3E5 817 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 DZIP1Q86YF9 867 aaKnown RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 CCDC50Q8IVM0 306 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 LMBR1Q8WVP7 490 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 RIN2Q8WYP3 895 aaPredicted RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 GPKOWQ92917 476 aaPredicted RBP eCLIP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 NSUN4Q96CB9 384 aaKnown RBP7.01□□□□□ -1.29
PSMD6-204ENST00000467853 PAGR1Q9BTK6 254 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 SPZ1Q9BXG8 430 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 GDF3Q9NR23 364 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 MCM9Q9NXL9 1143 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 RGL2O15211 777 aa7.01□□□□□ -1.29
PSMD6-204ENST00000467853 NTSR2O95665 410 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms