RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 AOC3Q16853 763 aa15.2■□□□□ 0.02
BRAT1-203ENST00000467558 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
BRAT1-203ENST00000467558 CDHR1Q96JP9 859 aa15.2■□□□□ 0.02
BRAT1-203ENST00000467558 STMN4Q9H169 189 aaPredicted RBP15.2■□□□□ 0.02
BRAT1-203ENST00000467558 CASP14P31944 242 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 PSMD2Q13200 908 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 OXER1Q8TDS5 423 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 RPGRIP1Q96KN7 1286 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 SAR1BQ9Y6B6 198 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 NR2F2P24468 414 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-203ENST00000467558 CFAP58Q5T655 872 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 ARMCX5Q6P1M9 558 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 CACTINQ8WUQ7 758 aaKnown RBP15.19■□□□□ 0.02
BRAT1-203ENST00000467558 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
BRAT1-203ENST00000467558 LIG4P49917 911 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 ELF2Q15723 593 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 CFAP221Q4G0U5 840 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 ZBTB8OSQ8IWT0 167 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 CPVLQ9H3G5 476 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 PYCARDQ9ULZ3 195 aa15.19■□□□□ 0.02
BRAT1-203ENST00000467558 SLC8A3P57103 927 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 PPP1R18Q6NYC8 613 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 PEX26Q7Z412 305 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 ARFGAP2Q8N6H7 521 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 SLC17A8Q8NDX2 589 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 NRBP2Q9NSY0 501 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 CEP104O60308 925 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 POLR2FP61218 127 aaKnown RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 ORC2Q13416 577 aaPredicted RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 MAN2A1Q16706 1144 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 CCDC94Q9BW85 323 aaPredicted RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 SAMSN1Q9NSI8 373 aaKnown RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 KCTD2Q14681 263 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 EXOC3L4Q17RC7 722 aa15.18■□□□□ 0.02
BRAT1-203ENST00000467558 ADD3Q9UEY8 706 aaKnown RBP15.18■□□□□ 0.02
BRAT1-203ENST00000467558 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 RNASE9P60153 205 aaKnown RBP15.17■□□□□ 0.02
BRAT1-203ENST00000467558 RCSD1Q6JBY9 416 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 ZNF341Q9BYN7 854 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 ACTN4O43707 911 aaKnown RBP15.17■□□□□ 0.02
BRAT1-203ENST00000467558 OGFRQ9NZT2 677 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 COBLO75128 1261 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 POLGP54098 1239 aaPredicted RBP15.17■□□□□ 0.02
BRAT1-203ENST00000467558 CLUL1Q15846 466 aa15.17■□□□□ 0.02
BRAT1-203ENST00000467558 A0A1W2PRG0 241 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 CD19P15391 556 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 SNX16P57768 344 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 LRRC41Q15345 812 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 SARM1Q6SZW1 724 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 KIAA1524Q8TCG1 905 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 PSMB7Q99436 277 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 GOLPH3LQ9H4A5 285 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 FAM196BA6NMK8 535 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 F5H6K3 240 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 KLRC3Q07444 240 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 WHAMMP3Q1A5X7 153 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 KMT5BQ4FZB7 885 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 IFT20Q8IY31 132 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 U2AF1L4Q8WU68 220 aaKnown RBP15.16■□□□□ 0.02
BRAT1-203ENST00000467558 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 HOXA13P31271 388 aaPredicted RBP15.16■□□□□ 0.02
BRAT1-203ENST00000467558 RNF187Q5TA31 235 aaPredicted RBP15.16■□□□□ 0.02
BRAT1-203ENST00000467558 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 EMILIN3Q9NT22 766 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 CCNA1P78396 465 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 FAM160B1Q5W0V3 765 aa15.16■□□□□ 0.02
BRAT1-203ENST00000467558 EPB41L4AQ9HCS5 686 aaPredicted RBP15.16■□□□□ 0.02
BRAT1-203ENST00000467558 HERC5Q9UII4 1024 aaKnown RBP15.16■□□□□ 0.02
BRAT1-203ENST00000467558 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 METTL13Q8N6R0 699 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 CCDC127Q96BQ5 260 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 LRRC45Q96CN5 670 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 TAF6LQ9Y6J9 622 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 MEIS1O00470 390 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 KRT19P08727 400 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 ANTXR2P58335 489 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 LRRC63Q05C16 580 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 PPP2R5AQ15172 486 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 SLC7A3Q8WY07 619 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 BZW2Q9Y6E2 419 aaKnown RBP15.15■□□□□ 0.02
BRAT1-203ENST00000467558 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
BRAT1-203ENST00000467558 LRRIQ4A6NIV6 560 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 USP17L10C9JJH3 530 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 AKR1B1P15121 316 aa15.15■□□□□ 0.02
BRAT1-203ENST00000467558 U2AF2P26368 475 aaKnown RBP eCLIP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms