RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	DDIT3	P35638	169 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	GHRHR	Q02643	423 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	FUT2	Q10981	343 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	BAAT	Q14032	418 aa	Predicted RBP	11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	USH1G	Q495M9	461 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369		Q6ZUG5	572 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	TMTC3	Q6ZXV5	915 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	UBE2Q1	Q7Z7E8	422 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	MICU3	Q86XE3	530 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	FBXO11	Q86XK2	927 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	RAB11FIP4	Q86YS3	637 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	CCDC144CP	Q8IYA2	1237 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	CMTR1	Q8N1G2	835 aa	Known RBP	11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	U2AF1L4	Q8WU68	220 aa	Known RBP	11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	DEFB118	Q96PH6	123 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	PURB	Q96QR8	312 aa	Known RBP	11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	PIGS	Q96S52	555 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	LZTS2	Q9BRK4	669 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	AMN	Q9BXJ7	453 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	MAF1	Q9H063	256 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	NRBP1	Q9UHY1	535 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	ABCB11	O95342	1321 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	SYNGAP1	Q96PV0	1343 aa		11.52	□□□□□ -0.57
CHEK2-221	ENST00000456369	PNMA6F	A0A0J9YX94	578 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	KLF18	A0A0U1RQI7	1052 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	ZBTB43	O43298	467 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	DHX16	O60231	1041 aa	Known RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	SNAI1	O95863	264 aa	Predicted RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	HSP90AA1	P07900	732 aa	Known RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	GNAQ	P50148	359 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	RPS6	P62753	249 aa	Known RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	APOBR	Q0VD83	1088 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	TOB2	Q14106	344 aa	Predicted RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	PRAMEF19	Q5SWL8	479 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	TYW1B	Q6NUM6	668 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	NSMF	Q6X4W1	530 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	SLC30A10	Q6XR72	485 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	TBC1D5	Q92609	795 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	BRF1	Q92994	677 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	ZDHHC16	Q969W1	377 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	EPAS1	Q99814	870 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	UPF3B	Q9BZI7	483 aa	Known RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	KATNBL1	Q9H079	304 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	SLK	Q9H2G2	1235 aa	Predicted RBP	11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	CYP46A1	Q9Y6A2	500 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	NID2	Q14112	1375 aa		11.51	□□□□□ -0.57
CHEK2-221	ENST00000456369	CD2BP2	O95400	341 aa	Known RBP	11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	CDC27	P30260	824 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	MLLT3	P42568	568 aa	Predicted RBP	11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	NBR1	Q14596	966 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	NFKBIB	Q15653	356 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	SYNE3	Q6ZMZ3	975 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	RNF207	Q6ZRF8	634 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	HOMER1	Q86YM7	354 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	MORC4	Q8TE76	937 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	RBM28	Q9NW13	759 aa	Known RBP	11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	OGDHL	Q9ULD0	1010 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	PCDHA1	Q9Y5I3	950 aa		11.5	□□□□□ -0.57
CHEK2-221	ENST00000456369	GOLGA8B	A8MQT2	603 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	SEPT4	O43236	478 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	CAPN2	P17655	700 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	EDNRB	P24530	442 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	PDIA3	P30101	505 aa	Known RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	ADD1	P35611	737 aa	Known RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	HSD17B4	P51659	736 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	FGD1	P98174	961 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	PPP2R5B	Q15173	497 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	RTN1	Q16799	776 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	ARMCX2	Q7L311	632 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	RRP36	Q96EU6	259 aa	Known RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	COL20A1	Q9P218	1284 aa		11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	DDX20	Q9UHI6	824 aa	Known RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	MRPL11	Q9Y3B7	192 aa	Known RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	DDX49	Q9Y6V7	483 aa	Known RBP	11.49	□□□□□ -0.57
CHEK2-221	ENST00000456369	LOC102724159	A0A0B4J2E5	919 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	PTPDC1	A2A3K4	754 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	GOLGA8A	A7E2F4	631 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	MSC	O60682	206 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	CALML3	P27482	149 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	METAP2	P50579	478 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	NEK4	P51957	841 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	TRAF1	Q13077	416 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	PWP2	Q15269	919 aa	Known RBP	11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	MCF2L2	Q86YR7	1114 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	CCDC82	Q8N4S0	544 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	DNER	Q8NFT8	737 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	PIBF1	Q8WXW3	757 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	ABHD16B	Q9H3Z7	469 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	PDRG1	Q9NUG6	133 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	MAP3K20	Q9NYL2	800 aa	Known RBP	11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	CNPY2	Q9Y2B0	182 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	CNTNAP5	Q8WYK1	1306 aa		11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.48	□□□□□ -0.57
CHEK2-221	ENST00000456369	TNRC18	O15417	2968 aa	Predicted RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	KIAA0100	Q14667	2235 aa	Known RBP	11.47	□□□□□ -0.57
CHEK2-221	ENST00000456369	TCHH	Q07283	1943 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms