RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 FOXO4P98177 505 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 CUL4BQ13620 913 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 TRIM14Q14142 442 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 TBC1D10BQ4KMP7 808 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 DNAJC21Q5F1R6 531 aaKnown RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 TTC39AQ5SRH9 613 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 SPATA1Q5VX52 437 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 CPLX2Q6PUV4 134 aaKnown RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 MMS22LQ6ZRQ5 1243 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 SH3RF1Q7Z6J0 888 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 TADA2BQ86TJ2 420 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 MCF2L2Q86YR7 1114 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 XAGE3Q8WTP9 111 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 APPBP2Q92624 585 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 FAM163AQ96GL9 167 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 TMEM87BQ96K49 555 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 RNPC3Q96LT9 517 aaKnown RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 MYD88Q99836 296 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 ARPC5LQ9BPX5 153 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 ALG1Q9BT22 464 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 FBXO2Q9UK22 296 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 LRRIQ3A6PVS8 624 aaPredicted RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 PSMD14O00487 310 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 TNFRSF10BO14763 440 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 LILRB3O75022 631 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 ABL1P00519 1130 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 KRT18P05783 430 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 P4HBP07237 508 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 NDUFV2P19404 249 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 ARHGAP25P42331 645 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 USP14P54578 494 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 ITIH3Q06033 890 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 GOLGA8FQ08AF8 430 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 GOLGA8DPQ0D2H9 430 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 COPS6Q7L5N1 327 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 TRAPPC11Q7Z392 1133 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 UBE3BQ7Z3V4 1068 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 STK11IPQ8N1F8 1099 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 CEP120Q8N960 986 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 MYCBPQ99417 103 aaPredicted RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 TACO1Q9BSH4 297 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 FOXP1Q9H334 677 aaPredicted RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 SRPRBQ9Y5M8 271 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 ERVV-2B6SEH9 535 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 EYA2O00167 538 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 N4BP1O75113 896 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 CHRNA5P30532 468 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 SCNN1AP37088 669 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 LIFRP42702 1097 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 MTF1Q14872 753 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 KARSQ15046 597 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 RILPL1Q5EBL4 403 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 PAPD7Q5XG87 772 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 TTLL5Q6EMB2 1281 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 GBP6Q6ZN66 633 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 PLBD2Q8NHP8 589 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 AFAP1L1Q8TED9 768 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 DESI2Q9BSY9 194 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 IRX2Q9BZI1 471 aaPredicted RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 FAM204AQ9H8W3 233 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 SLC52A2Q9HAB3 445 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 A1CFQ9NQ94 594 aaKnown RBP9□□□□□ -0.97
VTI1A-202ENST00000432306 LZTS1Q9Y250 596 aa9□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L15C9J2P7 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L10C9JJH3 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L13C9JLJ4 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L12C9JPN9 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L11C9JVI0 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L21D6R901 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L18D6R9N7 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L22D6RA61 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L17D6RBQ6 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L19D6RCP7 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L20D6RJB6 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 RNF40O75150 1001 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 GYPCP04921 128 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 SCP2P22307 547 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 GCGRP47871 477 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 SPAG1Q07617 926 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 USP17L24Q0WX57 530 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 QPCTQ16769 361 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 KIF4BQ2VIQ3 1234 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 SYCP2LQ5T4T6 812 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 MCTP2Q6DN12 878 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 FOXR1Q6PIV2 292 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 APOA5Q6Q788 366 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 ZNF572Q7Z3I7 529 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-202ENST00000432306 RALYLQ86SE5 291 aaKnown RBP8.99□□□□□ -0.97
VTI1A-202ENST00000432306 NOSTRINQ8IVI9 506 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 WDR75Q8IWA0 830 aaKnown RBP8.99□□□□□ -0.97
VTI1A-202ENST00000432306 SLC35F6Q8N357 371 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 IGSF22Q8N9C0 903 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 COG1Q8WTW3 980 aa8.99□□□□□ -0.97
VTI1A-202ENST00000432306 WASF1Q92558 559 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms