RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MYL1P05976 194 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 HSD17B4P51659 736 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 MAP3K9P80192 1104 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 VGLL4Q14135 290 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 SH3D19Q5HYK7 790 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
ACTB-204ENST00000425660 LENG9Q96B70 501 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 AGBL1Q96MI9 1066 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
ACTB-204ENST00000425660 CCPG1Q9ULG6 757 aa17.15■□□□□ 0.34
ACTB-204ENST00000425660 BECN2A8MW95 431 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 GOLGA6L19H0YKK7 550 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 IKBKBO14920 756 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 ADCY5O95622 1261 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 CFBP00751 764 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 AFMP43652 599 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 HMGCS2P54868 508 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 SAMD3Q8N6K7 520 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 MLKLQ8NB16 471 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 TBC1D5Q92609 795 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 ADAMTS5Q9UNA0 930 aa17.14■□□□□ 0.34
ACTB-204ENST00000425660 SMCHD1A6NHR9 2005 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 IQCA1LA6NCM1 817 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 VWA5AO00534 786 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
ACTB-204ENST00000425660 SARM1Q6SZW1 724 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 DLK2Q6UY11 383 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 SLFN12Q8IYM2 578 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 CLEC4DQ8WXI8 215 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 MAP3K20Q9NYL2 800 aaKnown RBP17.14■□□□□ 0.33
ACTB-204ENST00000425660 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
ACTB-204ENST00000425660 SCN4AP35499 1836 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 FAM86B1E9PN63 330 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 FAM86B2P0C5J1 330 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 NCAPHQ15003 741 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 CT47A1Q5JQC4 288 aaPredicted RBP17.13■□□□□ 0.33
ACTB-204ENST00000425660 ISM2Q6H9L7 571 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 AOPEPQ8N6M6 819 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
ACTB-204ENST00000425660 TAF1DQ9H5J8 278 aaPredicted RBP17.13■□□□□ 0.33
ACTB-204ENST00000425660 PLCG1P19174 1290 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 OAZ1P54368 228 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 SEMA3FQ13275 785 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 PRKG1Q13976 671 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 HS1BP3Q53T59 392 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
ACTB-204ENST00000425660 MCF2L2Q86YR7 1114 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 FAM20AQ96MK3 541 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 MYPNQ86TC9 1320 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 IGLV3-22A0A075B6J6 115 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 POTEMA6NI47 508 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 POTECB2RU33 542 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 SLC26A4O43511 780 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 ZBED4O75132 1171 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 IREB2P48200 963 aaKnown RBP17.12■□□□□ 0.33
ACTB-204ENST00000425660 CATSPERGQ6ZRH7 1159 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 CALML4Q96GE6 196 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 EHMT1Q9H9B1 1298 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 DACH1Q9UI36 760 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 RABGAP1Q9Y3P9 1069 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 CSADQ9Y600 493 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 RLFQ13129 1914 aa17.12■□□□□ 0.33
ACTB-204ENST00000425660 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 NFIBO00712 420 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 ATP2A1O14983 1001 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 CASP1P29466 404 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 DSG3P32926 999 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 CUL4BQ13620 913 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 COG2Q14746 738 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 PRR16Q569H4 304 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 HYIQ5T013 277 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 KRT79Q5XKE5 535 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 PNMA8AQ86V59 439 aaPredicted RBP17.11■□□□□ 0.33
ACTB-204ENST00000425660 ATG4CQ96DT6 458 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
ACTB-204ENST00000425660 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
ACTB-204ENST00000425660 STK17AQ9UEE5 414 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 OTOFQ9HC10 1997 aa17.11■□□□□ 0.33
ACTB-204ENST00000425660 NF2P35240 595 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 MYL5Q02045 173 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 GRB10Q13322 594 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 RPTORQ8N122 1335 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 STAMQ92783 540 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 MARCH6O60337 910 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms