RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 FIBPO43427 364 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 GADD45BO75293 160 aaPredicted RBP7.84□□□□□ -1.15
CPS1-202ENST00000417946 FLOT1O75955 427 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 ICAM1P05362 532 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 CALML3P27482 149 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 ADCY7P51828 1080 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 NLRP5P59047 1200 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 USP17L24Q0WX57 530 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 TRIM29Q14134 588 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 UBE2SQ16763 222 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 SWT1Q5T5J6 900 aaKnown RBP7.84□□□□□ -1.15
CPS1-202ENST00000417946 SPRYD7Q5W111 196 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 GALNT17Q6IS24 598 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 FBXO11Q86XK2 927 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 RASAL3Q86YV0 1011 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 PRPF38AQ8NAV1 312 aaKnown RBP7.84□□□□□ -1.15
CPS1-202ENST00000417946 LEO1Q8WVC0 666 aaPredicted RBP7.84□□□□□ -1.15
CPS1-202ENST00000417946 TBC1D5Q92609 795 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 PGBD1Q96JS3 809 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 R3HDMLQ9H3Y0 253 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 RTEL1Q9NZ71 1219 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 RCOR1Q9UKL0 485 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 ISY1Q9ULR0 285 aaKnown RBP7.84□□□□□ -1.15
CPS1-202ENST00000417946 AGTPBP1Q9UPW5 1226 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 MRVI1Q9Y6F6 885 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 THSD7BQ9C0I4 1608 aa7.84□□□□□ -1.15
CPS1-202ENST00000417946 ELP1O95163 1332 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 ADGRA2Q96PE1 1338 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 FAM155AB1AL88 458 aaPredicted RBP7.83□□□□□ -1.16
CPS1-202ENST00000417946 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 NFIBO00712 420 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 ATP2A1O14983 1001 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 IKQ13123 557 aaPredicted RBP7.83□□□□□ -1.16
CPS1-202ENST00000417946 TMEM132BQ14DG7 1078 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 USH1GQ495M9 461 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 MUM1L1Q5H9M0 696 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 AXDND1Q5T1B0 1012 aaPredicted RBP7.83□□□□□ -1.16
CPS1-202ENST00000417946 ANO1Q5XXA6 986 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 USP17L6PQ6QN14 398 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 LBX2Q6XYB7 198 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 GADL1Q6ZQY3 521 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 PIK3AP1Q6ZUJ8 805 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 SAPCD2Q86UD0 394 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 C4orf32Q8N8J7 132 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 C2orf69Q8N8R5 385 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 TTC13Q8NBP0 860 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 LINC00301Q8NCQ3 95 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 GPT2Q8TD30 523 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 SLC10A4Q96EP9 437 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 GBP4Q96PP9 640 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 PTPN18Q99952 460 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 TMUB1Q9BVT8 246 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 RAVER2Q9HCJ3 691 aaKnown RBP7.83□□□□□ -1.16
CPS1-202ENST00000417946 C6orf50Q9HD87 102 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 TXNRD2Q9NNW7 524 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 TMOD4Q9NZQ9 345 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 BTBD7Q9P203 1132 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 COL20A1Q9P218 1284 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 RIPK3Q9Y572 518 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 PCDHB6Q9Y5E3 794 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
CPS1-202ENST00000417946 MORC2Q9Y6X9 1032 aaPredicted RBP7.83□□□□□ -1.16
CPS1-202ENST00000417946 ABCB11O95342 1321 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 FRMPD4Q14CM0 1322 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 RPTORQ8N122 1335 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 TESPA1A2RU30 521 aaPredicted RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 BTBD19C9JJ37 291 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 YEATS4O95619 227 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 SLC10A3P09131 477 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 ZBTB48P10074 688 aaPredicted RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 XBP1P17861 261 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 HSD17B4P51659 736 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 APLP1P51693 650 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 OAZ1P54368 228 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 HUNKP57058 714 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 KRT85P78386 507 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 SNAPC2Q13487 334 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 COG2Q14746 738 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 SAFBQ15424 915 aaKnown RBP eCLIP7.82□□□□□ -1.16
CPS1-202ENST00000417946 INF2Q27J81 1249 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 JAKMIP3Q5VZ66 844 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 ATL3Q6DD88 541 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 FAM43AQ8N2R8 423 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 CCDC12Q8WUD4 166 aaPredicted RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 PSTPIP2Q9H939 334 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 CCPG1Q9ULG6 757 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 ATP6V1DQ9Y5K8 247 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 PLXNB2O15031 1838 aa7.82□□□□□ -1.16
CPS1-202ENST00000417946 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
CPS1-202ENST00000417946 ZSWIM8A7E2V4 1837 aa7.81□□□□□ -1.16
CPS1-202ENST00000417946 ZNF236Q9UL36 1845 aa7.81□□□□□ -1.16
CPS1-202ENST00000417946 CCL15-CCL14A0A0B4J2E2 113 aa7.81□□□□□ -1.16
CPS1-202ENST00000417946 DDX11L8A8MPP1 907 aa7.81□□□□□ -1.16
CPS1-202ENST00000417946 IGF2BP3O00425 579 aaKnown RBP eCLIP7.81□□□□□ -1.16
CPS1-202ENST00000417946 PRPF40AO75400 957 aaKnown RBP7.81□□□□□ -1.16
CPS1-202ENST00000417946 DNAJB2P25686 324 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms