RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TDP2O95551 362 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 TXLNAP40222 546 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 ZNF445P59923 1031 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 GPAT2Q6NUI2 795 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 SMC1BQ8NDV3 1235 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 AK8Q96MA6 479 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 TIGD1Q96MW7 591 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 P2RX7Q99572 595 aaKnown RBP27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 TMEM60Q9H2L4 133 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 TNMDQ9H2S6 317 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 KCNH3Q9ULD8 1083 aa27.82■■■□□ 2.04
ECHDC3-201ENST00000379215 PLS1Q14651 629 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 TMEM266Q2M3C6 531 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 MUM1L1Q5H9M0 696 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 RNF207Q6ZRF8 634 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 RAB34Q9BZG1 259 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 PASKQ96RG2 1323 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 Q4G0T1 1027 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 POTEDQ86YR6 584 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 RIOX2Q8IUF8 465 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 TBC1D5Q92609 795 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 CCDC34Q96HJ3 373 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 MS4A4AQ96JQ5 239 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 MTMR9Q96QG7 549 aa27.81■■■□□ 2.04
ECHDC3-201ENST00000379215 CCL15-CCL14A0A0B4J2E2 113 aa27.8■■■□□ 2.04
ECHDC3-201ENST00000379215 EDIL3O43854 480 aa27.8■■■□□ 2.04
ECHDC3-201ENST00000379215 ZNF202O95125 648 aa27.8■■■□□ 2.04
ECHDC3-201ENST00000379215 GRIN1Q05586 938 aa27.8■■■□□ 2.04
ECHDC3-201ENST00000379215 CCL15Q16663 113 aa27.8■■■□□ 2.04
ECHDC3-201ENST00000379215 ANKRD23Q86SG2 305 aa27.8■■■□□ 2.04
ECHDC3-201ENST00000379215 TBX3O15119 743 aa27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 SLC37A4O43826 429 aa27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 ZNF76P36508 570 aa27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 GSE1Q14687 1217 aa27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 SYTL5Q8TDW5 730 aaPredicted RBP27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 RIPK3Q9Y572 518 aa27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 COL11A1P12107 1806 aaPredicted RBP27.79■■■□□ 2.04
ECHDC3-201ENST00000379215 RPTORQ8N122 1335 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 SLC25A27O95847 323 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 RPS6P62753 249 aaKnown RBP27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 SLFN12Q8IYM2 578 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 SPATC1LQ9H0A9 340 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 FRMPD4Q14CM0 1322 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 MARCH6O60337 910 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 FXR2P51116 673 aaKnown RBP eCLIP27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 NSMFQ6X4W1 530 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 SYMPKQ92797 1274 aaKnown RBP27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 USP25Q9UHP3 1055 aa27.78■■■□□ 2.04
ECHDC3-201ENST00000379215 MYH7BA7E2Y1 1941 aa27.77■■■□□ 2.04
ECHDC3-201ENST00000379215 SYCE3A1L190 88 aa27.77■■■□□ 2.04
ECHDC3-201ENST00000379215 KIF3CO14782 793 aa27.77■■■□□ 2.04
ECHDC3-201ENST00000379215 IL17AQ16552 155 aa27.77■■■□□ 2.04
ECHDC3-201ENST00000379215 ELOA2Q8IYF1 753 aaPredicted RBP27.77■■■□□ 2.04
ECHDC3-201ENST00000379215 HOOK1Q9UJC3 728 aaKnown RBP27.77■■■□□ 2.04
ECHDC3-201ENST00000379215 SETQ01105 290 aaPredicted RBP27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 SPECC1Q5M775 1068 aa27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 XRRA1Q6P2D8 792 aa27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 RBM43Q6ZSC3 357 aaKnown RBP27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 SDF4Q9BRK5 362 aa27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 KCNMB3Q9NPA1 279 aa27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 BTBD7Q9P203 1132 aa27.76■■■□□ 2.03
ECHDC3-201ENST00000379215 PFASO15067 1338 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 PDIA5Q14554 519 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 KANK3Q6NY19 840 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 SAPCD2Q86UD0 394 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 BRI3BPQ8WY22 251 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 FAM20AQ96MK3 541 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 SMCHD1A6NHR9 2005 aa27.75■■■□□ 2.03
ECHDC3-201ENST00000379215 PDHXO00330 501 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 ZNF157P51786 506 aaPredicted RBP27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 PRR16Q569H4 304 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 RGMBQ6NW40 437 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 LRSAM1Q6UWE0 723 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 SLC30A10Q6XR72 485 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 IGSF22Q8N9C0 903 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 PAGR1Q9BTK6 254 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 CCSER1Q9C0I3 900 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 BTBD19C9JJ37 291 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 UBA7P41226 1012 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 TXKP42681 527 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 BAATQ14032 418 aaPredicted RBP27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 CAMK4Q16566 473 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 CEP55Q53EZ4 464 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 PCNX4Q63HM2 1172 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 RASAL3Q86YV0 1011 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 SMCR8Q8TEV9 937 aaPredicted RBP27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 EPSTI1Q96J88 318 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 PARK7Q99497 189 aaKnown RBP27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 COL20A1Q9P218 1284 aa27.74■■■□□ 2.03
ECHDC3-201ENST00000379215 TESPA1A2RU30 521 aaPredicted RBP27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 MANSC4A6NHS7 340 aaPredicted RBP27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 FAM86B1E9PN63 330 aa27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 FAM86B2P0C5J1 330 aa27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 GCLCP48506 637 aaPredicted RBP27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 MKRN3Q13064 507 aaKnown RBP27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 NIPA1Q7RTP0 329 aa27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 CNNM3Q8NE01 707 aa27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 ZCCHC17Q9NP64 241 aaKnown RBP27.73■■■□□ 2.03
ECHDC3-201ENST00000379215 A1CFQ9NQ94 594 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms