RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 HSPA4P34932 840 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 FXR1P51114 621 aaKnown RBP eCLIP26.27■■□□□ 1.8
COL9A2-201ENST00000372736 TRAF1Q13077 416 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 PIBF1Q8WXW3 757 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 GLT1D1Q96MS3 346 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 LZTS2Q9BRK4 669 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 AP5M1Q9H0R1 490 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 ELP1O95163 1332 aa26.27■■□□□ 1.8
COL9A2-201ENST00000372736 A0A1W2PPC1 479 aa26.26■■□□□ 1.79
COL9A2-201ENST00000372736 REC8O95072 547 aa26.26■■□□□ 1.79
COL9A2-201ENST00000372736 GNAQP50148 359 aa26.26■■□□□ 1.79
COL9A2-201ENST00000372736 SRBD1Q8N5C6 995 aaKnown RBP26.26■■□□□ 1.79
COL9A2-201ENST00000372736 SCFD2Q8WU76 684 aa26.26■■□□□ 1.79
COL9A2-201ENST00000372736 PXMP2Q9NR77 195 aa26.26■■□□□ 1.79
COL9A2-201ENST00000372736 MAP3K20Q9NYL2 800 aaKnown RBP26.26■■□□□ 1.79
COL9A2-201ENST00000372736 PQBP1O60828 265 aaKnown RBP26.25■■□□□ 1.79
COL9A2-201ENST00000372736 SLC34A2O95436 690 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 EIF2AK2P19525 551 aaKnown RBP26.25■■□□□ 1.79
COL9A2-201ENST00000372736 HOXA13P31271 388 aaPredicted RBP26.25■■□□□ 1.79
COL9A2-201ENST00000372736 MDM2Q00987 491 aaPredicted RBP26.25■■□□□ 1.79
COL9A2-201ENST00000372736 PPP2R5BQ15173 497 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 APOA5Q6Q788 366 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 ANKRD33Q7Z3H0 272 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 MICU3Q86XE3 530 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 SAMD3Q8N6K7 520 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 RRP36Q96EU6 259 aaKnown RBP26.25■■□□□ 1.79
COL9A2-201ENST00000372736 IWS1Q96ST2 819 aa26.25■■□□□ 1.79
COL9A2-201ENST00000372736 LAMA3Q16787 3333 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 ARHGEF16Q5VV41 709 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 TMTC3Q6ZXV5 915 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 SH3RF1Q7Z6J0 888 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 CMTR1Q8N1G2 835 aaKnown RBP26.24■■□□□ 1.79
COL9A2-201ENST00000372736 FANCBQ8NB91 859 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 PRDM5Q9NQX1 630 aaPredicted RBP26.24■■□□□ 1.79
COL9A2-201ENST00000372736 PRKAG2Q9UGJ0 569 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 SNX14Q9Y5W7 946 aa26.24■■□□□ 1.79
COL9A2-201ENST00000372736 A0A0U1RQG5 324 aaPredicted RBP26.23■■□□□ 1.79
COL9A2-201ENST00000372736 TRIM43BA6NCK2 446 aa26.23■■□□□ 1.79
COL9A2-201ENST00000372736 ARIH2O95376 493 aa26.23■■□□□ 1.79
COL9A2-201ENST00000372736 HMGB1P09429 215 aaKnown RBP26.23■■□□□ 1.79
COL9A2-201ENST00000372736 CXCL17Q6UXB2 119 aa26.23■■□□□ 1.79
COL9A2-201ENST00000372736 TRIM43Q96BQ3 446 aaPredicted RBP26.23■■□□□ 1.79
COL9A2-201ENST00000372736 TOX2Q96NM4 488 aa26.23■■□□□ 1.79
COL9A2-201ENST00000372736 BRPF3Q9ULD4 1205 aa26.23■■□□□ 1.79
COL9A2-201ENST00000372736 GCOM1H8Y6P7 765 aaPredicted RBP26.22■■□□□ 1.79
COL9A2-201ENST00000372736 NKRFO15226 690 aaKnown RBP eCLIP26.22■■□□□ 1.79
COL9A2-201ENST00000372736 CLTBP09497 229 aa26.22■■□□□ 1.79
COL9A2-201ENST00000372736 POLR2MP0CAP2 368 aa26.22■■□□□ 1.79
COL9A2-201ENST00000372736 CPA1P15085 419 aa26.22■■□□□ 1.79
COL9A2-201ENST00000372736 STXBP2Q15833 593 aa26.22■■□□□ 1.79
COL9A2-201ENST00000372736 JAKMIP1Q96N16 626 aaKnown RBP26.22■■□□□ 1.79
COL9A2-201ENST00000372736 SEC63Q9UGP8 760 aaKnown RBP26.22■■□□□ 1.79
COL9A2-201ENST00000372736 ZEB2O60315 1214 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 CABYRO75952 493 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 NR3C2P08235 984 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 TXNP10599 105 aaKnown RBP26.21■■□□□ 1.79
COL9A2-201ENST00000372736 CDK7P50613 346 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 TTLL4Q14679 1199 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 CCDC62Q6P9F0 684 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 OR6J1Q8NGC5 347 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 COPS5Q92905 334 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 VTI1AQ96AJ9 217 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 PDCD2LQ9BRP1 358 aa26.21■■□□□ 1.79
COL9A2-201ENST00000372736 UBE2OQ9C0C9 1292 aaKnown RBP26.21■■□□□ 1.79
COL9A2-201ENST00000372736 ARVCFO00192 962 aa26.2■■□□□ 1.78
COL9A2-201ENST00000372736 FAAP100Q0VG06 881 aa26.2■■□□□ 1.78
COL9A2-201ENST00000372736 SYNE3Q6ZMZ3 975 aa26.2■■□□□ 1.78
COL9A2-201ENST00000372736 SEPT14Q6ZU15 432 aa26.2■■□□□ 1.78
COL9A2-201ENST00000372736 IL31RAQ8NI17 732 aa26.2■■□□□ 1.78
COL9A2-201ENST00000372736 LBHD1Q9BQE6 289 aaPredicted RBP26.2■■□□□ 1.78
COL9A2-201ENST00000372736 MROH7Q68CQ1 1323 aa26.19■■□□□ 1.78
COL9A2-201ENST00000372736 CNTNAP5Q8WYK1 1306 aa26.19■■□□□ 1.78
COL9A2-201ENST00000372736 EPB41L2O43491 1005 aaKnown RBP26.19■■□□□ 1.78
COL9A2-201ENST00000372736 CPT1AP50416 773 aa26.19■■□□□ 1.78
COL9A2-201ENST00000372736 PGM5Q15124 567 aa26.19■■□□□ 1.78
COL9A2-201ENST00000372736 SLC43A3Q8NBI5 491 aa26.19■■□□□ 1.78
COL9A2-201ENST00000372736 SCN10AQ9Y5Y9 1956 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 GRIN2DO15399 1336 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 FRMPD4Q14CM0 1322 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 KLF18A0A0U1RQI7 1052 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 DCDC2CA8MYV0 355 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 KIAA0355O15063 1070 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 ZBTB43O43298 467 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 EIF3JO75822 258 aaKnown RBP26.18■■□□□ 1.78
COL9A2-201ENST00000372736 ITGB8P26012 769 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 FCHSD1Q86WN1 690 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 TDHQ8IZJ6 230 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 CCDC82Q8N4S0 544 aa26.18■■□□□ 1.78
COL9A2-201ENST00000372736 RBM28Q9NW13 759 aaKnown RBP26.18■■□□□ 1.78
COL9A2-201ENST00000372736 hCG_1642624A0A1W2PR95 340 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 RCAN1P53805 252 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 PURAQ00577 322 aaKnown RBP26.17■■□□□ 1.78
COL9A2-201ENST00000372736 FUT2Q10981 343 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 RTN1Q16799 776 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 BLOC1S2Q6QNY1 142 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 FAM126BQ8IXS8 530 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 BADQ92934 168 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 TBX21Q9UL17 535 aa26.17■■□□□ 1.78
COL9A2-201ENST00000372736 A6NJR5 290 aa26.16■■□□□ 1.78
COL9A2-201ENST00000372736 RGS20O76081 388 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms