RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ELNP15502 786 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 ARHGEF16Q5VV41 709 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 FCHSD1Q86WN1 690 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 REXO1Q8N1G1 1221 aaKnown RBP17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 MORC4Q8TE76 937 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 SHISA4Q96DD7 197 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 TAAR1Q96RJ0 339 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 EHMT1Q9H9B1 1298 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 FLRT1Q9NZU1 646 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 NRBP1Q9UHY1 535 aa17.81■□□□□ 0.44
PRPF38B-202ENST00000370022 DTNBO60941 627 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 GJB2P29033 226 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 BECN1Q14457 450 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 UBE2SQ16763 222 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 PURBQ96QR8 312 aaKnown RBP17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 MCOLN1Q9GZU1 580 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 ASTN1O14525 1302 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 FRMPD4Q14CM0 1322 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 PLXNA1Q9UIW2 1896 aa17.8■□□□□ 0.44
PRPF38B-202ENST00000370022 EDNRBP24530 442 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 UBXN2AP68543 259 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 BLIDQ8IZY5 108 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 PCDHA6Q9UN73 950 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 PCDHA8Q9Y5H6 950 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 RPTORQ8N122 1335 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 MMP1P03956 469 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 PDE4DQ08499 809 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 XRRA1Q6P2D8 792 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 PDCD2LQ9BRP1 358 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 KCNJ14Q9UNX9 436 aa17.79■□□□□ 0.44
PRPF38B-202ENST00000370022 LCTP09848 1927 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 INHAP05111 366 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 NR3C2P08235 984 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 EIF2AK2P19525 551 aaKnown RBP17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 CYP2C19P33261 490 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 PGM5Q15124 567 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 SAFBQ15424 915 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 NPY5RQ15761 445 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 STXBP2Q15833 593 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 MAP3K21Q5TCX8 1036 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 KRT40Q6A162 431 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 ARMC5Q96C12 935 aa17.78■□□□□ 0.44
PRPF38B-202ENST00000370022 M0R2N6 131 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 STAM2O75886 525 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 SNAI1O95863 264 aaPredicted RBP17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 PDCP20941 246 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 KRT2P35908 639 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 SH3TC2Q8TF17 1288 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 ANO3Q9BYT9 981 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 VTA1Q9NP79 307 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 GJB4Q9NTQ9 266 aa17.77■□□□□ 0.44
PRPF38B-202ENST00000370022 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 PRKAR2AP13861 404 aaKnown RBP17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 CCND2P30279 289 aa17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 CACNB2Q08289 660 aaPredicted RBP17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 PCNX4Q63HM2 1172 aa17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 VSIG10LQ86VR7 867 aa17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
PRPF38B-202ENST00000370022 CYBAP13498 195 aa17.75■□□□□ 0.43
PRPF38B-202ENST00000370022 SREBF1P36956 1147 aa17.75■□□□□ 0.43
PRPF38B-202ENST00000370022 ACVR2BQ13705 512 aa17.75■□□□□ 0.43
PRPF38B-202ENST00000370022 KRT25Q7Z3Z0 450 aa17.75■□□□□ 0.43
PRPF38B-202ENST00000370022 ZNF333Q96JL9 665 aa17.75■□□□□ 0.43
PRPF38B-202ENST00000370022 PDIA4P13667 645 aaKnown RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 TRIM32Q13049 653 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 DIS3L2Q8IYB7 885 aaKnown RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 KATNBL1Q9H079 304 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 H3BQV1 296 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 ADAMTS3O15072 1205 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 ZNF865P0CJ78 1059 aaPredicted RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 FOSBP53539 338 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 FOXP1Q9H334 677 aaPredicted RBP17.74■□□□□ 0.43
PRPF38B-202ENST00000370022 MSCO60682 206 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 CYP3A4P08684 503 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 GUCY1B3Q02153 619 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 NONOQ15233 471 aaKnown RBP eCLIP17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 GNPTABQ3T906 1256 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 CRYGNQ8WXF5 182 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 PGBD1Q96JS3 809 aa17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 ZHX1Q9UKY1 873 aaPredicted RBP17.73■□□□□ 0.43
PRPF38B-202ENST00000370022 BTBD18B2RXH4 712 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms