RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ANKRD20A12PQ8NF67 263 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 SNX29Q8TEQ0 813 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 HAS1Q92839 578 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 CCDC47Q96A33 483 aaKnown RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 GMCL1Q96IK5 515 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 GMLQ99445 158 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 AMNQ9BXJ7 453 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 EXOC1Q9NV70 894 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 ZNF70Q9UC06 446 aaPredicted RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 HERC5Q9UII4 1024 aaKnown RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 AKR1B15C9JRZ8 316 aaPredicted RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 H7C1D1 291 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 STX10O60499 249 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 FCER1AP12319 257 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 TAL1P17542 331 aaPredicted RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 SPAG1Q07617 926 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 RBL2Q08999 1139 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 MCM6Q14566 821 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 MIGA2Q7L4E1 593 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 DYMQ7RTS9 669 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 KIF18AQ8NI77 898 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 LARP4BQ92615 738 aaKnown RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 HPS3Q969F9 1004 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 TRIM47Q96LD4 638 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 C7orf25Q9BPX7 421 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 SRRTQ9BXP5 876 aaKnown RBP8.49□□□□□ -1.05
IFT88-201ENST00000319980 BLOC1S4Q9NUP1 217 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 TAB2Q9NYJ8 693 aa8.49□□□□□ -1.05
IFT88-201ENST00000319980 PES1O00541 588 aaKnown RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 MEIS2O14770 477 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 PBX1P40424 430 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 SYDE2Q5VT97 1194 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 FBXO11Q86XK2 927 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 FAM151AQ8WW52 585 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 PNMA5Q96PV4 448 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 ANO3Q9BYT9 981 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 TMEM39BQ9GZU3 492 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 GLT8D2Q9H1C3 349 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 CD2APQ9Y5K6 639 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 GCFC2P16383 781 aaKnown RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 CASP14P31944 242 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 COPB1P53618 953 aaKnown RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 SYT10Q6XYQ8 523 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 IRF2BP1Q8IU81 584 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 NIM1KQ8IY84 436 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 ACER1Q8TDN7 264 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 SYT17Q9BSW7 474 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 STK17AQ9UEE5 414 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 ZNRF3Q9ULT6 936 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 MYMKA6NI61 221 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 KIF2AO00139 706 aaPredicted RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 IDEP14735 1019 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 ECM1Q16610 540 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 KCNK18Q7Z418 384 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 CSGALNACT2Q8N6G5 542 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 P2RX7Q99572 595 aaKnown RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 SLC39A2Q9NP94 309 aa8.48□□□□□ -1.05
IFT88-201ENST00000319980 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 SCAF8Q9UPN6 1271 aaKnown RBP8.48□□□□□ -1.05
IFT88-201ENST00000319980 CCP110O43303 1012 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 ZBTB7AO95365 584 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 GYPCP04921 128 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 HOXA13P31271 388 aaPredicted RBP8.47□□□□□ -1.05
IFT88-201ENST00000319980 USP11P51784 963 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 UBXN1Q04323 297 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 SEMA3FQ13275 785 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 ZYXQ15942 572 aaKnown RBP8.47□□□□□ -1.05
IFT88-201ENST00000319980 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 TTI2Q6NXR4 508 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
IFT88-201ENST00000319980 DHTKD1Q96HY7 919 aaPredicted RBP8.47□□□□□ -1.05
IFT88-201ENST00000319980 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 PPP2R2CQ9Y2T4 447 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 SPDYE3A6NKU9 549 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 ZSCAN12O43309 604 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 FXR1P51114 621 aaKnown RBP eCLIP8.47□□□□□ -1.05
IFT88-201ENST00000319980 STAT2P52630 851 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 ARHGAP4P98171 946 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 CXCL9Q07325 125 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 HSP90AA2PQ14568 343 aaPredicted RBP8.47□□□□□ -1.05
IFT88-201ENST00000319980 MTF1Q14872 753 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 PRR16Q569H4 304 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 KIAA1755Q5JYT7 1200 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 ANKRD40Q6AI12 368 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 CNNM4Q6P4Q7 775 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 TOGARAM2Q6ZUX3 1019 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 KIAA0895Q8NCT3 520 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 RAD54LQ92698 747 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 DDX12PQ92771 950 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 P2RX5Q93086 422 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 DESI2Q9BSY9 194 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 PIM2Q9P1W9 311 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 MYH8P13535 1937 aa8.47□□□□□ -1.05
IFT88-201ENST00000319980 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 SSBP05455 408 aaKnown RBP eCLIP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms