RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
SDC1-201ENST00000254351 OSBPL7Q9BZF2 842 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 LRRC4CQ9HCJ2 640 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 UPP2O95045 317 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 MEA1Q16626 185 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 TCP11Q8WWU5 503 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 PIK3R5Q8WYR1 880 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 ESR2Q92731 530 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 MIEF2Q96C03 454 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 ATP6V1G3Q96LB4 118 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 CPVLQ9H3G5 476 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 DISC1Q9NRI5 854 aa15.89■□□□□ 0.13
SDC1-201ENST00000254351 EEF1GP26641 437 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 LRRC41Q15345 812 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 CFAP221Q4G0U5 840 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 CPLX4Q7Z7G2 160 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 FAM228AQ86W67 206 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 MCM8Q9UJA3 840 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 TPX2Q9ULW0 747 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 MEGF6O75095 1541 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 MAP3K15Q6ZN16 1313 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 CLTAP09496 248 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 CTNNA1P35221 906 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 NPY5RQ15761 445 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 TTI2Q6NXR4 508 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 IQCKQ8N0W5 287 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 ZSCAN10Q96SZ4 725 aaPredicted RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 NOVA2Q9UNW9 492 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 COL14A1Q05707 1796 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 FAM205AQ6ZU69 1335 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 RAD51CO43502 376 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 TCP1P17987 556 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 PPP1R7Q15435 360 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 KDM7AQ6ZMT4 941 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 ADAT2Q7Z6V5 191 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 UHMK1Q8TAS1 419 aaKnown RBP15.88■□□□□ 0.13
SDC1-201ENST00000254351 LPIN2Q92539 896 aa15.88■□□□□ 0.13
SDC1-201ENST00000254351 HIBCHQ6NVY1 386 aaPredicted RBP15.87■□□□□ 0.13
SDC1-201ENST00000254351 CCDC170Q8IYT3 715 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 PACSIN1Q9BY11 444 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 TTYH3Q9C0H2 523 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 A0A1W2PQC6 194 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 FAM107AO95990 144 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 SMTNP53814 917 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 PAK2Q13177 524 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 KLHDC7AQ5VTJ3 777 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 FUKQ8N0W3 1084 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 STAG1Q8WVM7 1258 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 L3MBTL1Q9Y468 752 aa15.87■□□□□ 0.13
SDC1-201ENST00000254351 GCOM1H8Y6P7 765 aaPredicted RBP15.86■□□□□ 0.13
SDC1-201ENST00000254351 MYZAPP0CAP1 466 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 MYBL1P10243 752 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 FLT3P36888 993 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 NBPF9Q3BBW0 867 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 MIIPQ5JXC2 388 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 KIF6Q6ZMV9 814 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 DNAJC10Q8IXB1 793 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 NLRP3Q96P20 1036 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 NOX5Q96PH1 765 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 TLDC2A0PJX2 215 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 KCNK3O14649 394 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 ITGB3BPQ13352 177 aaPredicted RBP15.86■□□□□ 0.13
SDC1-201ENST00000254351 P2RX5Q93086 422 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 TACO1Q9BSH4 297 aaKnown RBP15.86■□□□□ 0.13
SDC1-201ENST00000254351 TSGA10Q9BZW7 698 aa15.86■□□□□ 0.13
SDC1-201ENST00000254351 RASSF9O75901 435 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 EZRP15311 586 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 PLCG1P19174 1290 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 FAM133BQ5BKY9 247 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 LRCH2Q5VUJ6 765 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 TMTC2Q8N394 836 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 DPH5Q9H2P9 285 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 THAP9Q9H5L6 903 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 TBC1D7Q9P0N9 293 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 CNOT8Q9UFF9 292 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 KCNG1Q9UIX4 513 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 LEMD3Q9Y2U8 911 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 EPB41P11171 864 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 PREPLQ4J6C6 727 aaPredicted RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 GLIS3Q8NEA6 775 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 GMNCA6NCL1 334 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 EVA1CP58658 441 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 MAGOHP61326 146 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 MYO1EQ12965 1108 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 MAEAQ7L5Y9 396 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 ZBTB38Q8NAP3 1195 aaPredicted RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 MAGOHBQ96A72 148 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 PURBQ96QR8 312 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 DDX47Q9H0S4 455 aaKnown RBP15.85■□□□□ 0.13
SDC1-201ENST00000254351 GOPCQ9HD26 462 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
SDC1-201ENST00000254351 PRPF3O43395 683 aaKnown RBP15.84■□□□□ 0.13
SDC1-201ENST00000254351 KLRC4O43908 158 aa15.84■□□□□ 0.13
SDC1-201ENST00000254351 DDR1Q08345 913 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms