RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SPT16P32558 1035 aaKnown RBP1.42□□□□□ -2.18
snR40snR40 EDS1P38073 919 aa1.42□□□□□ -2.18
snR40snR40 JJJ3P47138 172 aa1.42□□□□□ -2.18
snR40snR40 YGR273CP53329 174 aa1.42□□□□□ -2.18
snR40snR40 CDC73Q06697 393 aa1.42□□□□□ -2.18
snR40snR40 STR2P47164 639 aa1.41□□□□□ -2.18
snR40snR40 LYS5P50113 272 aa1.41□□□□□ -2.18
snR40snR40 AI1P03875 834 aa1.4□□□□□ -2.19
snR40snR40 MIF2P35201 549 aa1.4□□□□□ -2.19
snR40snR40 MSB3P48566 633 aaPredicted RBP1.4□□□□□ -2.19
snR40snR40 ISM1P48526 1002 aa1.39□□□□□ -2.19
snR40snR40 CST9Q06032 482 aa1.38□□□□□ -2.19
snR40snR40 MIP1P15801 1254 aa1.37□□□□□ -2.19
snR40snR40 PTK2P47116 818 aaKnown RBP1.37□□□□□ -2.19
snR40snR40 CCP1P00431 361 aa1.35□□□□□ -2.19
snR40snR40 YMR187CQ03236 431 aa1.35□□□□□ -2.19
snR40snR40 TY1A-DR4O74302 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-HP0C2I4 478 aaKnown RBP1.34□□□□□ -2.19
snR40snR40 TY1A-AP0CX57 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-PR1P0CX58 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-ORP0CX59 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-PR2P0CX60 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-DR5P0CX65 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-ER2P0CX66 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-GR3P0CX67 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-LR1P0CX68 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-MR2P0CX69 440 aa1.34□□□□□ -2.19
snR40snR40 SEC2P17065 759 aa1.34□□□□□ -2.19
snR40snR40 ROG3P43602 733 aa1.34□□□□□ -2.19
snR40snR40 NUP85P46673 744 aa1.34□□□□□ -2.19
snR40snR40 TY1A-JR2P47099 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-DR1Q03856 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-ML1Q04706 440 aaKnown RBP1.34□□□□□ -2.19
snR40snR40 TY1A-BRQ12217 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-NL2Q12470 440 aa1.34□□□□□ -2.19
snR40snR40 TY1A-GR2Q12485 440 aa1.34□□□□□ -2.19
snR40snR40 AMN1P38285 549 aaPredicted RBP1.33□□□□□ -2.2
snR40snR40 AVT1P47082 602 aa1.33□□□□□ -2.2
snR40snR40 TY1A-MR1Q04215 440 aa1.33□□□□□ -2.2
snR40snR40 TYW1Q08960 810 aaKnown RBP1.33□□□□□ -2.2
snR40snR40 SRF1Q12516 437 aa1.33□□□□□ -2.2
snR40snR40 TDA6Q06466 467 aa1.32□□□□□ -2.2
snR40snR40 RRN7P40992 514 aa1.31□□□□□ -2.2
snR40snR40 NUD1P32336 851 aa1.3□□□□□ -2.2
snR40snR40 INP52P50942 1183 aa1.3□□□□□ -2.2
snR40snR40 UGA3P26370 528 aa1.29□□□□□ -2.2
snR40snR40 GCD11P32481 527 aaKnown RBP1.29□□□□□ -2.2
snR40snR40 AOS1Q06624 347 aa1.29□□□□□ -2.2
snR40snR40 YCK2P23292 546 aaKnown RBP1.28□□□□□ -2.2
snR40snR40 PAT1P25644 796 aaKnown RBP1.28□□□□□ -2.2
snR40snR40 YPT53P36019 220 aa1.28□□□□□ -2.2
snR40snR40 ALO1P54783 526 aaKnown RBP1.28□□□□□ -2.2
snR40snR40 UBP2Q01476 1272 aa1.28□□□□□ -2.2
snR40snR40 PUS5Q06244 254 aa1.28□□□□□ -2.2
snR40snR40 YRR1Q12172 810 aa1.28□□□□□ -2.2
snR40snR40 MOD5P07884 428 aa1.27□□□□□ -2.21
snR40snR40 SBE2P42223 864 aaKnown RBP1.27□□□□□ -2.21
snR40snR40 LSB6P42951 607 aa1.27□□□□□ -2.21
snR40snR40 KEX1P09620 729 aa1.26□□□□□ -2.21
snR40snR40 NPL4P33755 580 aa1.26□□□□□ -2.21
snR40snR40 OMA1P36163 345 aa1.26□□□□□ -2.21
snR40snR40 MAK11P20484 414 aaKnown RBP1.25□□□□□ -2.21
snR40snR40 MCX1P38323 520 aaPredicted RBP1.25□□□□□ -2.21
snR40snR40 MCA1Q08601 432 aa1.24□□□□□ -2.21
snR40snR40 RPP1BP10622 106 aaKnown RBP1.23□□□□□ -2.21
snR40snR40 ELM1P32801 640 aa1.23□□□□□ -2.21
snR40snR40 OSH7P38755 437 aa1.23□□□□□ -2.21
snR40snR40 MGA2P40578 1113 aa1.23□□□□□ -2.21
snR40snR40 YDR215CQ12240 137 aa1.23□□□□□ -2.21
snR40snR40 COQ8P27697 501 aa1.22□□□□□ -2.21
snR40snR40 LSC2P53312 427 aa1.22□□□□□ -2.21
snR40snR40 SLN1P39928 1220 aaPredicted RBP1.21□□□□□ -2.22
snR40snR40 ARP8Q12386 881 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
snR40snR40 TAD3Q9URQ3 322 aa1.21□□□□□ -2.22
snR40snR40 YCR015CP25616 317 aa1.19□□□□□ -2.22
snR40snR40 ADE12P80210 433 aaKnown RBP1.19□□□□□ -2.22
snR40snR40 UBP5P39944 805 aa1.18□□□□□ -2.22
snR40snR40 YJR098CP47139 656 aa1.18□□□□□ -2.22
snR40snR40 PEX21P50091 288 aa1.18□□□□□ -2.22
snR40snR40 TCB1Q12466 1186 aa1.18□□□□□ -2.22
snR40snR40 YKL222CP35995 705 aa1.16□□□□□ -2.22
snR40snR40 PAC1P39946 494 aaKnown RBP1.16□□□□□ -2.22
snR40snR40 RTT106P40161 455 aa1.16□□□□□ -2.22
snR40snR40 YNR014WP53719 212 aa1.16□□□□□ -2.22
snR40snR40 TUM1Q08686 304 aaKnown RBP1.16□□□□□ -2.22
snR40snR40 TAT1P38085 619 aa1.15□□□□□ -2.23
snR40snR40 NAM8Q00539 523 aaKnown RBP1.15□□□□□ -2.23
snR40snR40 TFB4Q12004 338 aa1.15□□□□□ -2.23
snR40snR40 AAD14P42884 376 aa1.14□□□□□ -2.23
snR40snR40 SYH1Q02875 849 aaKnown RBP1.14□□□□□ -2.23
snR40snR40 NOP53Q12080 455 aaKnown RBP1.14□□□□□ -2.23
snR40snR40 GAP1P19145 602 aaPredicted RBP1.13□□□□□ -2.23
snR40snR40 ARG82P07250 355 aa1.12□□□□□ -2.23
snR40snR40 PCS60P38137 543 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
snR40snR40 CEM1P39525 442 aa1.12□□□□□ -2.23
snR40snR40 CUZ1P53899 274 aa1.12□□□□□ -2.23
snR40snR40 DLD1P32891 587 aa1.11□□□□□ -2.23
snR40snR40 YLR326WQ06170 240 aaKnown RBP1.11□□□□□ -2.23
snR40snR40 MRT4P33201 236 aaKnown RBP1.1□□□□□ -2.23
snR40snR40 BOI2P39969 1040 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 114.1 ms