RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeastyeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPS1YLR120C FKH1P40466 484 aa16.52■□□□□ 0.24
YPS1YLR120C TY1B-NL2Q99337 1749 aaKnown RBP16.48■□□□□ 0.23
YPS1YLR120C RIA1P53893 1110 aa16.47■□□□□ 0.23
YPS1YLR120C CFT1Q06632 1357 aaKnown RBP16.44■□□□□ 0.22
YPS1YLR120C YML133CQ03099 1374 aa16.41■□□□□ 0.22
YPS1YLR120C YLL067CQ07888 1374 aa16.41■□□□□ 0.22
YPS1YLR120C YLL066CQ99208 1374 aa16.41■□□□□ 0.22
YPS1YLR120C RCM1P53972 490 aa16.4■□□□□ 0.22
YPS1YLR120C YEF3P16521 1044 aaKnown RBP16.36■□□□□ 0.21
YPS1YLR120C PSK1P31374 1356 aa16.36■□□□□ 0.21
YPS1YLR120C TRK1P12685 1235 aa16.36■□□□□ 0.21
YPS1YLR120C YFR006WP43590 535 aa16.36■□□□□ 0.21
YPS1YLR120C PPH3P32345 308 aa16.34■□□□□ 0.21
YPS1YLR120C RPP0P05317 312 aaKnown RBP16.32■□□□□ 0.2
YPS1YLR120C YMR196WQ04336 1088 aa16.31■□□□□ 0.2
YPS1YLR120C IOC4Q04213 475 aa16.3■□□□□ 0.2
YPS1YLR120C SNF2P22082 1703 aa16.29■□□□□ 0.2
YPS1YLR120C VPS27P40343 622 aaKnown RBP16.29■□□□□ 0.2
YPS1YLR120C YNR029CP53729 429 aaKnown RBP16.29■□□□□ 0.2
YPS1YLR120C CDC45Q08032 650 aa16.28■□□□□ 0.2
YPS1YLR120C THI12P42883 340 aa16.28■□□□□ 0.2
YPS1YLR120C THI5P43534 340 aa16.28■□□□□ 0.2
YPS1YLR120C THI11P47183 340 aa16.28■□□□□ 0.2
YPS1YLR120C THI13Q07748 340 aa16.28■□□□□ 0.2
YPS1YLR120C YDL144CQ07589 356 aa16.27■□□□□ 0.19
YPS1YLR120C CPS1P27614 576 aa16.26■□□□□ 0.19
YPS1YLR120C LEU2P04173 364 aaPredicted RBP16.22■□□□□ 0.19
YPS1YLR120C KAR2P16474 682 aaKnown RBP16.22■□□□□ 0.19
YPS1YLR120C PDI1P17967 522 aaKnown RBP16.21■□□□□ 0.19
YPS1YLR120C RVB2Q12464 471 aaKnown RBP16.2■□□□□ 0.18
YPS1YLR120C TAP42Q04372 366 aa16.19■□□□□ 0.18
YPS1YLR120C FUN12P39730 1002 aaKnown RBP16.19■□□□□ 0.18
YPS1YLR120C MTR4P47047 1073 aaKnown RBP16.19■□□□□ 0.18
YPS1YLR120C MPP10P47083 593 aaKnown RBP16.17■□□□□ 0.18
YPS1YLR120C RRP46P53256 223 aaPredicted RBP16.16■□□□□ 0.18
YPS1YLR120C RTR1P40084 226 aaPredicted RBP16.14■□□□□ 0.17
YPS1YLR120C RTF1P53064 558 aa16.14■□□□□ 0.17
YPS1YLR120C HIM1Q06674 414 aa16.14■□□□□ 0.17
YPS1YLR120C SUI2P20459 304 aaKnown RBP16.13■□□□□ 0.17
YPS1YLR120C AUS1Q08409 1394 aa16.12■□□□□ 0.17
YPS1YLR120C GRX4P32642 244 aa16.11■□□□□ 0.17
YPS1YLR120C PAP2P53632 584 aaKnown RBP16.11■□□□□ 0.17
YPS1YLR120C YRB30P53107 440 aaPredicted RBP16.1■□□□□ 0.17
YPS1YLR120C ADE6P38972 1358 aaKnown RBP16.07■□□□□ 0.16
YPS1YLR120C RPS24AP0CX31 135 aaKnown RBP16.07■□□□□ 0.16
YPS1YLR120C RPS24BP0CX32 135 aaKnown RBP16.07■□□□□ 0.16
YPS1YLR120C CSE4P36012 229 aa16.07■□□□□ 0.16
YPS1YLR120C PRD1P25375 712 aa16.03■□□□□ 0.16
YPS1YLR120C PRP43P53131 767 aaKnown RBP16.03■□□□□ 0.16
YPS1YLR120C GAS4Q08271 471 aa16.03■□□□□ 0.16
YPS1YLR120C TY4B-HP0C2J7 1802 aa16.03■□□□□ 0.16
YPS1YLR120C TY4B-JP47024 1803 aa16.03■□□□□ 0.16
YPS1YLR120C SAP155P43612 1002 aa16.02■□□□□ 0.16
YPS1YLR120C TFA1P36100 482 aa16.02■□□□□ 0.15
YPS1YLR120C FPR3P38911 411 aaKnown RBP15.99■□□□□ 0.15
YPS1YLR120C THI22Q06490 572 aa15.99■□□□□ 0.15
YPS1YLR120C NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.99■□□□□ 0.15not detected
YPS1YLR120C RPO41P13433 1351 aaKnown RBP15.98■□□□□ 0.15
YPS1YLR120C DPS1P04802 557 aaKnown RBP15.98■□□□□ 0.15
YPS1YLR120C TPD3P31383 635 aa15.98■□□□□ 0.15
YPS1YLR120C HEF3P53978 1044 aaKnown RBP15.93■□□□□ 0.14
YPS1YLR120C PTP3P40048 928 aa15.92■□□□□ 0.14
YPS1YLR120C YIL177CP40434 1758 aa15.91■□□□□ 0.14
YPS1YLR120C YJL225CP40889 1758 aa15.91■□□□□ 0.14
YPS1YLR120C RTT109Q07794 436 aa15.91■□□□□ 0.14
YPS1YLR120C APC1P53886 1748 aa15.9■□□□□ 0.14
YPS1YLR120C BUB1P41695 1021 aaKnown RBP RIP-Chip data15.9■□□□□ 0.14not detected
YPS1YLR120C YRF1-2P40105 1681 aa15.89■□□□□ 0.13
YPS1YLR120C RAD2P07276 1031 aa15.89■□□□□ 0.13
YPS1YLR120C RRP5Q05022 1729 aaKnown RBP15.88■□□□□ 0.13
YPS1YLR120C AKL1P38080 1108 aaKnown RBP15.87■□□□□ 0.13
YPS1YLR120C SIR4P11978 1358 aa15.85■□□□□ 0.13
YPS1YLR120C DAL5P15365 543 aa15.85■□□□□ 0.13
YPS1YLR120C YIL092WP40497 633 aa15.84■□□□□ 0.13
YPS1YLR120C RPC31P17890 251 aa15.83■□□□□ 0.13
YPS1YLR120C YRF1-4O13559 1382 aa15.83■□□□□ 0.12
YPS1YLR120C BUD27P43573 796 aaKnown RBP RIP-Chip data15.82■□□□□ 0.12not detected
YPS1YLR120C MAK21Q12176 1025 aaKnown RBP15.81■□□□□ 0.12
YPS1YLR120C FKS3Q04952 1785 aa15.81■□□□□ 0.12
YPS1YLR120C URB1P34241 1764 aaKnown RBP15.79■□□□□ 0.12
YPS1YLR120C DSD1P53095 428 aa15.79■□□□□ 0.12
YPS1YLR120C PRP5P21372 849 aaPredicted RBP15.76■□□□□ 0.11
YPS1YLR120C YNL050CP53952 270 aa15.76■□□□□ 0.11
YPS1YLR120C PRP45P28004 379 aaPredicted RBP15.74■□□□□ 0.11
YPS1YLR120C NTH2P35172 780 aa15.74■□□□□ 0.11
YPS1YLR120C POL32P47110 350 aa15.74■□□□□ 0.11
YPS1YLR120C GYP7P48365 746 aa15.73■□□□□ 0.11
YPS1YLR120C HSP104P31539 908 aaKnown RBP15.72■□□□□ 0.11
YPS1YLR120C RRT14P40470 206 aa15.71■□□□□ 0.11
YPS1YLR120C ZDS1P50111 915 aaKnown RBP15.71■□□□□ 0.11
YPS1YLR120C SLM3Q12093 417 aa15.71■□□□□ 0.11
YPS1YLR120C REB1P21538 810 aa15.71■□□□□ 0.1
YPS1YLR120C MSB3P48566 633 aaPredicted RBP15.71■□□□□ 0.1
YPS1YLR120C YAH1Q12184 172 aaKnown RBP15.71■□□□□ 0.1
YPS1YLR120C APP1P53933 587 aa15.7■□□□□ 0.1
YPS1YLR120C MAM1P40065 302 aa15.69■□□□□ 0.1
YPS1YLR120C PUF6Q04373 656 aaKnown RBP15.67■□□□□ 0.1
YPS1YLR120C ENT1Q12518 454 aa15.67■□□□□ 0.1
YPS1YLR120C AOS1Q06624 347 aa15.66■□□□□ 0.1
YPS1YLR120C YBR287WP38355 427 aa15.64■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms