RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C NAP1P25293 417 aaKnown RBP10.94□□□□□ -0.66
SSL2YIL143C CAB3P36076 571 aa10.94□□□□□ -0.66
SSL2YIL143C CHZ1P40019 153 aaPredicted RBP10.93□□□□□ -0.66
SSL2YIL143C TAF8Q03750 510 aa10.93□□□□□ -0.66
SSL2YIL143C SNF2P22082 1703 aa10.92□□□□□ -0.66
SSL2YIL143C YEF3P16521 1044 aaKnown RBP10.92□□□□□ -0.66
SSL2YIL143C EAF7P53911 425 aaKnown RBP10.92□□□□□ -0.66
SSL2YIL143C AVT3P36062 692 aa10.91□□□□□ -0.66
SSL2YIL143C MPP10P47083 593 aaKnown RBP10.91□□□□□ -0.66
SSL2YIL143C FKH1P40466 484 aa10.9□□□□□ -0.66
SSL2YIL143C RAD9P14737 1309 aa10.88□□□□□ -0.67
SSL2YIL143C TYS1P36421 394 aaKnown RBP10.87□□□□□ -0.67
SSL2YIL143C YRB30P53107 440 aaPredicted RBP10.87□□□□□ -0.67
SSL2YIL143C EBP2P36049 427 aaKnown RBP10.86□□□□□ -0.67
SSL2YIL143C TRM3Q07527 1436 aa10.84□□□□□ -0.67
SSL2YIL143C BCK1Q01389 1478 aa10.83□□□□□ -0.68
SSL2YIL143C NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
SSL2YIL143C ABP1P15891 592 aaKnown RBP10.82□□□□□ -0.68
SSL2YIL143C ALD4P46367 519 aaKnown RBP10.82□□□□□ -0.68
SSL2YIL143C YIR014WP40570 242 aa10.81□□□□□ -0.68
SSL2YIL143C RRP46P53256 223 aaPredicted RBP10.81□□□□□ -0.68
SSL2YIL143C RTR1P40084 226 aaPredicted RBP10.8□□□□□ -0.68
SSL2YIL143C YML133CQ03099 1374 aa10.8□□□□□ -0.68
SSL2YIL143C YLL067CQ07888 1374 aa10.8□□□□□ -0.68
SSL2YIL143C YLL066CQ99208 1374 aa10.8□□□□□ -0.68
SSL2YIL143C SAP155P43612 1002 aa10.8□□□□□ -0.68
SSL2YIL143C CAB1Q04430 367 aa10.8□□□□□ -0.68
SSL2YIL143C SNF7P39929 240 aaKnown RBP10.79□□□□□ -0.68
SSL2YIL143C RAD2P07276 1031 aa10.79□□□□□ -0.68
SSL2YIL143C IPL1P38991 367 aa10.79□□□□□ -0.68
SSL2YIL143C DAL5P15365 543 aa10.78□□□□□ -0.68
SSL2YIL143C TPD3P31383 635 aa10.76□□□□□ -0.69
SSL2YIL143C HAP1P0CE41 1502 aa10.75□□□□□ -0.69
SSL2YIL143C DJP1P40564 432 aa10.75□□□□□ -0.69
SSL2YIL143C PCT1P13259 424 aa10.74□□□□□ -0.69
SSL2YIL143C YIL092WP40497 633 aa10.74□□□□□ -0.69
SSL2YIL143C ROX1P25042 368 aa10.73□□□□□ -0.69
SSL2YIL143C THI22Q06490 572 aa10.73□□□□□ -0.69
SSL2YIL143C KRE5P22023 1365 aa10.72□□□□□ -0.69
SSL2YIL143C KAR2P16474 682 aaKnown RBP10.72□□□□□ -0.69
SSL2YIL143C POL32P47110 350 aa10.72□□□□□ -0.69
SSL2YIL143C PRD1P25375 712 aa10.7□□□□□ -0.7
SSL2YIL143C CSE4P36012 229 aa10.7□□□□□ -0.7
SSL2YIL143C PAP2P53632 584 aaKnown RBP10.69□□□□□ -0.7
SSL2YIL143C DNF3Q12674 1656 aa10.69□□□□□ -0.7
SSL2YIL143C HEF3P53978 1044 aaKnown RBP10.68□□□□□ -0.7
SSL2YIL143C BUD27P43573 796 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
SSL2YIL143C HIM1Q06674 414 aa10.67□□□□□ -0.7
SSL2YIL143C PUF6Q04373 656 aaKnown RBP10.66□□□□□ -0.7
SSL2YIL143C RCM1P53972 490 aa10.65□□□□□ -0.7
SSL2YIL143C RTT109Q07794 436 aa10.65□□□□□ -0.7
SSL2YIL143C SLN1P39928 1220 aaPredicted RBP10.64□□□□□ -0.71
SSL2YIL143C PPH3P32345 308 aa10.63□□□□□ -0.71
SSL2YIL143C VPS24P36095 224 aaKnown RBP10.62□□□□□ -0.71
SSL2YIL143C RLF2Q12495 606 aa10.62□□□□□ -0.71
SSL2YIL143C AUS1Q08409 1394 aa10.6□□□□□ -0.71
SSL2YIL143C PDI1P17967 522 aaKnown RBP10.6□□□□□ -0.71
SSL2YIL143C TAP42Q04372 366 aa10.6□□□□□ -0.71
SSL2YIL143C PSK1P31374 1356 aa10.6□□□□□ -0.71
SSL2YIL143C MAK21Q12176 1025 aaKnown RBP10.59□□□□□ -0.71
SSL2YIL143C SIR4P11978 1358 aa10.59□□□□□ -0.71
SSL2YIL143C MSP1P28737 362 aa10.59□□□□□ -0.71
SSL2YIL143C USO1P25386 1790 aa10.58□□□□□ -0.72
SSL2YIL143C MNN4P36044 1178 aa10.58□□□□□ -0.72
SSL2YIL143C MRX12P47084 519 aa10.58□□□□□ -0.72
SSL2YIL143C TCB2P48231 1178 aa10.56□□□□□ -0.72
SSL2YIL143C TRP5P00931 707 aaKnown RBP10.55□□□□□ -0.72
SSL2YIL143C LEU2P04173 364 aaPredicted RBP10.54□□□□□ -0.72
SSL2YIL143C RIA1P53893 1110 aa10.54□□□□□ -0.72
SSL2YIL143C ITT1Q04638 464 aa10.54□□□□□ -0.72
SSL2YIL143C ARL1P38116 183 aaKnown RBP10.54□□□□□ -0.72
SSL2YIL143C RTF1P53064 558 aa10.53□□□□□ -0.72
SSL2YIL143C TY1B-NL2Q99337 1749 aaKnown RBP10.53□□□□□ -0.72
SSL2YIL143C BNI1P41832 1953 aa10.53□□□□□ -0.72
SSL2YIL143C ILV3P39522 585 aaKnown RBP10.53□□□□□ -0.72
SSL2YIL143C LSP1Q12230 341 aaKnown RBP10.52□□□□□ -0.72
SSL2YIL143C GRX4P32642 244 aa10.52□□□□□ -0.73
SSL2YIL143C SIS2P36024 562 aa10.52□□□□□ -0.73
SSL2YIL143C YRF1-4O13559 1382 aa10.52□□□□□ -0.73
SSL2YIL143C KNS1P32350 737 aaPredicted RBP10.51□□□□□ -0.73
SSL2YIL143C ITC1P53125 1264 aa10.51□□□□□ -0.73
SSL2YIL143C EDE1P34216 1381 aa10.51□□□□□ -0.73
SSL2YIL143C GAS4Q08271 471 aa10.51□□□□□ -0.73
SSL2YIL143C TEA1P47988 759 aa10.5□□□□□ -0.73
SSL2YIL143C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
SSL2YIL143C MTR4P47047 1073 aaKnown RBP10.48□□□□□ -0.73
SSL2YIL143C SRS2P12954 1174 aa10.47□□□□□ -0.73
SSL2YIL143C CPS1P27614 576 aa10.47□□□□□ -0.73
SSL2YIL143C RPO41P13433 1351 aaKnown RBP10.47□□□□□ -0.73
SSL2YIL143C NOT3P06102 836 aaKnown RBP10.47□□□□□ -0.73
SSL2YIL143C NKP2Q06162 153 aa10.47□□□□□ -0.73
SSL2YIL143C RPS24AP0CX31 135 aaKnown RBP10.46□□□□□ -0.74
SSL2YIL143C RPS24BP0CX32 135 aaKnown RBP10.46□□□□□ -0.74
SSL2YIL143C RRT14P40470 206 aa10.46□□□□□ -0.74
SSL2YIL143C DSD1P53095 428 aa10.46□□□□□ -0.74
SSL2YIL143C YBR287WP38355 427 aa10.45□□□□□ -0.74
SSL2YIL143C CTR9P89105 1077 aa10.45□□□□□ -0.74
SSL2YIL143C AKL1P38080 1108 aaKnown RBP10.44□□□□□ -0.74
SSL2YIL143C RAD50P12753 1312 aa10.44□□□□□ -0.74
SSL2YIL143C DPS1P04802 557 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms