RNA–Protein interactions for RNA: YDR234W

LYS4, Transcript of Homoaconitase, yeastyeast

Gene LYS4, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS4YDR234W YML133CQ03099 1374 aa14.26□□□□□ -0.13
LYS4YDR234W YLL067CQ07888 1374 aa14.26□□□□□ -0.13
LYS4YDR234W YLL066CQ99208 1374 aa14.26□□□□□ -0.13
LYS4YDR234W DNF3Q12674 1656 aa14.26□□□□□ -0.13
LYS4YDR234W HAP1P0CE41 1502 aa14.24□□□□□ -0.13
LYS4YDR234W PPH3P32345 308 aa14.22□□□□□ -0.13
LYS4YDR234W CFT1Q06632 1357 aaKnown RBP14.21□□□□□ -0.13
LYS4YDR234W MAK10Q02197 733 aa14.19□□□□□ -0.14
LYS4YDR234W YDL144CQ07589 356 aa14.19□□□□□ -0.14
LYS4YDR234W VPS27P40343 622 aaKnown RBP14.17□□□□□ -0.14
LYS4YDR234W RVB2Q12464 471 aaKnown RBP14.17□□□□□ -0.14
LYS4YDR234W ABP1P15891 592 aaKnown RBP14.15□□□□□ -0.14
LYS4YDR234W CDC45Q08032 650 aa14.14□□□□□ -0.15
LYS4YDR234W RPP0P05317 312 aaKnown RBP14.13□□□□□ -0.15
LYS4YDR234W MPP10P47083 593 aaKnown RBP14.12□□□□□ -0.15
LYS4YDR234W RRP46P53256 223 aaPredicted RBP14.12□□□□□ -0.15
LYS4YDR234W PSK1P31374 1356 aa14.11□□□□□ -0.15
LYS4YDR234W CPS1P27614 576 aa14.1□□□□□ -0.15
LYS4YDR234W SUI2P20459 304 aaKnown RBP14.08□□□□□ -0.15
LYS4YDR234W YNR029CP53729 429 aaKnown RBP14.08□□□□□ -0.15
LYS4YDR234W HIM1Q06674 414 aa14.08□□□□□ -0.15
LYS4YDR234W LEU2P04173 364 aaPredicted RBP14.07□□□□□ -0.16
LYS4YDR234W KAR2P16474 682 aaKnown RBP14.07□□□□□ -0.16
LYS4YDR234W RTR1P40084 226 aaPredicted RBP14.05□□□□□ -0.16
LYS4YDR234W IOC4Q04213 475 aa14.05□□□□□ -0.16
LYS4YDR234W SNF2P22082 1703 aa14.04□□□□□ -0.16
LYS4YDR234W PDI1P17967 522 aaKnown RBP14.03□□□□□ -0.16
LYS4YDR234W PAP2P53632 584 aaKnown RBP14.03□□□□□ -0.16
LYS4YDR234W TAP42Q04372 366 aa14.01□□□□□ -0.17
LYS4YDR234W AUS1Q08409 1394 aa14□□□□□ -0.17
LYS4YDR234W MTR4P47047 1073 aaKnown RBP14□□□□□ -0.17
LYS4YDR234W RPS24AP0CX31 135 aaKnown RBP13.98□□□□□ -0.17
LYS4YDR234W RPS24BP0CX32 135 aaKnown RBP13.98□□□□□ -0.17
LYS4YDR234W USO1P25386 1790 aa13.97□□□□□ -0.17
LYS4YDR234W SAP155P43612 1002 aa13.97□□□□□ -0.17
LYS4YDR234W GAS4Q08271 471 aa13.97□□□□□ -0.17
LYS4YDR234W PRD1P25375 712 aa13.96□□□□□ -0.17
LYS4YDR234W THI22Q06490 572 aa13.96□□□□□ -0.17
LYS4YDR234W RTF1P53064 558 aa13.95□□□□□ -0.18
LYS4YDR234W TPD3P31383 635 aa13.95□□□□□ -0.18
LYS4YDR234W CSE4P36012 229 aa13.95□□□□□ -0.18
LYS4YDR234W YRB30P53107 440 aaPredicted RBP13.93□□□□□ -0.18
LYS4YDR234W GRX4P32642 244 aa13.92□□□□□ -0.18
LYS4YDR234W NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.92□□□□□ -0.18not detected
LYS4YDR234W FPR3P38911 411 aaKnown RBP13.91□□□□□ -0.18
LYS4YDR234W TFA1P36100 482 aa13.89□□□□□ -0.19
LYS4YDR234W DPS1P04802 557 aaKnown RBP13.89□□□□□ -0.19
LYS4YDR234W ADE6P38972 1358 aaKnown RBP13.89□□□□□ -0.19
LYS4YDR234W RTT109Q07794 436 aa13.88□□□□□ -0.19
LYS4YDR234W TY1B-NL2Q99337 1749 aaKnown RBP13.88□□□□□ -0.19
LYS4YDR234W RPC31P17890 251 aa13.87□□□□□ -0.19
LYS4YDR234W BUB1P41695 1021 aaKnown RBP RIP-Chip data13.87□□□□□ -0.19not detected
LYS4YDR234W HEF3P53978 1044 aaKnown RBP13.87□□□□□ -0.19
LYS4YDR234W DAL5P15365 543 aa13.86□□□□□ -0.19
LYS4YDR234W PRP43P53131 767 aaKnown RBP13.85□□□□□ -0.19
LYS4YDR234W RAD2P07276 1031 aa13.83□□□□□ -0.2
LYS4YDR234W THI12P42883 340 aa13.83□□□□□ -0.2
LYS4YDR234W THI5P43534 340 aa13.83□□□□□ -0.2
LYS4YDR234W THI11P47183 340 aa13.83□□□□□ -0.2
LYS4YDR234W THI13Q07748 340 aa13.83□□□□□ -0.2
LYS4YDR234W YIL092WP40497 633 aa13.82□□□□□ -0.2
LYS4YDR234W RPO41P13433 1351 aaKnown RBP13.81□□□□□ -0.2
LYS4YDR234W YMR196WQ04336 1088 aa13.79□□□□□ -0.2
LYS4YDR234W AKL1P38080 1108 aaKnown RBP13.79□□□□□ -0.2
LYS4YDR234W TY4B-HP0C2J7 1802 aa13.78□□□□□ -0.2
LYS4YDR234W TY4B-JP47024 1803 aa13.78□□□□□ -0.2
LYS4YDR234W POL32P47110 350 aa13.74□□□□□ -0.21
LYS4YDR234W YIL177CP40434 1758 aa13.73□□□□□ -0.21
LYS4YDR234W YJL225CP40889 1758 aa13.73□□□□□ -0.21
LYS4YDR234W DSD1P53095 428 aa13.73□□□□□ -0.21
LYS4YDR234W YRF1-4O13559 1382 aa13.72□□□□□ -0.21
LYS4YDR234W RRP5Q05022 1729 aaKnown RBP13.7□□□□□ -0.22
LYS4YDR234W RRT14P40470 206 aa13.7□□□□□ -0.22
LYS4YDR234W MAK21Q12176 1025 aaKnown RBP13.7□□□□□ -0.22
LYS4YDR234W SIR4P11978 1358 aa13.69□□□□□ -0.22
LYS4YDR234W PUF6Q04373 656 aaKnown RBP13.69□□□□□ -0.22
LYS4YDR234W YBR287WP38355 427 aa13.68□□□□□ -0.22
LYS4YDR234W BUD27P43573 796 aaKnown RBP RIP-Chip data13.68□□□□□ -0.22not detected
LYS4YDR234W HSP104P31539 908 aaKnown RBP13.67□□□□□ -0.22
LYS4YDR234W APC1P53886 1748 aa13.67□□□□□ -0.22
LYS4YDR234W NTH2P35172 780 aa13.67□□□□□ -0.22
LYS4YDR234W YNL050CP53952 270 aa13.67□□□□□ -0.22
LYS4YDR234W PRP45P28004 379 aaPredicted RBP13.66□□□□□ -0.22
LYS4YDR234W ZDS1P50111 915 aaKnown RBP13.66□□□□□ -0.22
LYS4YDR234W YRF1-2P40105 1681 aa13.66□□□□□ -0.22
LYS4YDR234W GYP7P48365 746 aa13.65□□□□□ -0.22
LYS4YDR234W PRP5P21372 849 aaPredicted RBP13.65□□□□□ -0.22
LYS4YDR234W OPY1P38271 328 aa13.65□□□□□ -0.22
LYS4YDR234W YFR016CP43597 1233 aaKnown RBP13.65□□□□□ -0.22
LYS4YDR234W MSB3P48566 633 aaPredicted RBP13.64□□□□□ -0.23
LYS4YDR234W TRP5P00931 707 aaKnown RBP13.63□□□□□ -0.23
LYS4YDR234W SRT1Q03175 343 aa13.62□□□□□ -0.23
LYS4YDR234W IME2P32581 645 aa13.62□□□□□ -0.23
LYS4YDR234W SLM3Q12093 417 aa13.6□□□□□ -0.23
LYS4YDR234W ILV3P39522 585 aaKnown RBP13.59□□□□□ -0.23
LYS4YDR234W BMS1Q08965 1183 aaKnown RBP13.59□□□□□ -0.23
LYS4YDR234W URB1P34241 1764 aaKnown RBP13.58□□□□□ -0.24
LYS4YDR234W MAM1P40065 302 aa13.57□□□□□ -0.24
LYS4YDR234W AOS1Q06624 347 aa13.57□□□□□ -0.24
LYS4YDR234W COQ4O13525 335 aa13.55□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms