RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 PREX2Q70Z35 1606 aa27.45■■□□□ 1.99
PHGDH-227ENST00000641811 RICTORQ6R327 1708 aa27.45■■□□□ 1.99
PHGDH-227ENST00000641811 KDM4FA0A1W2PPD8 638 aa27.44■■□□□ 1.98
PHGDH-227ENST00000641811 CDC42BPAQ5VT25 1732 aa27.44■■□□□ 1.98
PHGDH-227ENST00000641811 TIAM1Q13009 1591 aa27.43■■□□□ 1.98
PHGDH-227ENST00000641811 EHBP1L1Q8N3D4 1523 aa27.42■■□□□ 1.98
PHGDH-227ENST00000641811 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
PHGDH-227ENST00000641811 GPATCH8Q9UKJ3 1502 aaKnown RBP27.41■■□□□ 1.98
PHGDH-227ENST00000641811 POGZQ7Z3K3 1410 aa27.4■■□□□ 1.98
PHGDH-227ENST00000641811 CCNB3Q8WWL7 1395 aa27.39■■□□□ 1.98
PHGDH-227ENST00000641811 ZNF777Q9ULD5 760 aaPredicted RBP27.37■■□□□ 1.97
PHGDH-227ENST00000641811 AFAP1Q8N556 730 aa27.34■■□□□ 1.97
PHGDH-227ENST00000641811 ZMYM4Q5VZL5 1548 aa27.34■■□□□ 1.97
PHGDH-227ENST00000641811 ARHGEF12Q9NZN5 1544 aa27.33■■□□□ 1.97
PHGDH-227ENST00000641811 KANK4Q5T7N3 995 aaPredicted RBP27.33■■□□□ 1.97
PHGDH-227ENST00000641811 CFDP1Q9UEE9 299 aaPredicted RBP27.33■■□□□ 1.97
PHGDH-227ENST00000641811 LRRC9Q6ZRR7 1453 aa27.32■■□□□ 1.96
PHGDH-227ENST00000641811 YEATS2Q9ULM3 1422 aa27.32■■□□□ 1.96
PHGDH-227ENST00000641811 ABCC1P33527 1531 aa27.31■■□□□ 1.96
PHGDH-227ENST00000641811 NCOA2Q15596 1464 aa27.31■■□□□ 1.96
PHGDH-227ENST00000641811 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
PHGDH-227ENST00000641811 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
PHGDH-227ENST00000641811 SAMD9LQ8IVG5 1584 aa27.3■■□□□ 1.96
PHGDH-227ENST00000641811 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
PHGDH-227ENST00000641811 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
PHGDH-227ENST00000641811 ZFYVE16Q7Z3T8 1539 aa27.29■■□□□ 1.96
PHGDH-227ENST00000641811 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
PHGDH-227ENST00000641811 MAGI2Q86UL8 1455 aa27.27■■□□□ 1.96
PHGDH-227ENST00000641811 ITSN2Q9NZM3 1697 aa27.26■■□□□ 1.95
PHGDH-227ENST00000641811 ZNF644Q9H582 1327 aaPredicted RBP27.25■■□□□ 1.95
PHGDH-227ENST00000641811 HNRNPMP52272 730 aaKnown RBP eCLIP27.25■■□□□ 1.952e-6■■■■□ 23.7
PHGDH-227ENST00000641811 KDM5CP41229 1560 aa27.24■■□□□ 1.95
PHGDH-227ENST00000641811 APLP2Q06481 763 aa27.24■■□□□ 1.95
PHGDH-227ENST00000641811 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
PHGDH-227ENST00000641811 SYCP2Q9BX26 1530 aa27.23■■□□□ 1.95
PHGDH-227ENST00000641811 MYT1LQ9UL68 1186 aa27.22■■□□□ 1.95
PHGDH-227ENST00000641811 PLEKHH2Q8IVE3 1493 aa27.18■■□□□ 1.94
PHGDH-227ENST00000641811 HECW2Q9P2P5 1572 aa27.18■■□□□ 1.94
PHGDH-227ENST00000641811 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
PHGDH-227ENST00000641811 SIGLEC1Q9BZZ2 1709 aa27.17■■□□□ 1.94
PHGDH-227ENST00000641811 ATP10AO60312 1499 aa27.17■■□□□ 1.94
PHGDH-227ENST00000641811 MLH3Q9UHC1 1453 aa27.16■■□□□ 1.94
PHGDH-227ENST00000641811 C9orf84Q5VXU9 1444 aa27.12■■□□□ 1.93
PHGDH-227ENST00000641811 DIP2CQ9Y2E4 1556 aa27.12■■□□□ 1.93
PHGDH-227ENST00000641811 BCORL1Q5H9F3 1711 aa27.11■■□□□ 1.93
PHGDH-227ENST00000641811 ABCA6Q8N139 1617 aa27.11■■□□□ 1.93
PHGDH-227ENST00000641811 SPAG9O60271 1321 aaKnown RBP27.11■■□□□ 1.93
PHGDH-227ENST00000641811 CAMSAP2Q08AD1 1489 aa27.1■■□□□ 1.93
PHGDH-227ENST00000641811 MBD5Q9P267 1494 aa27.1■■□□□ 1.93
PHGDH-227ENST00000641811 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
PHGDH-227ENST00000641811 KIDINS220Q9ULH0 1771 aa27.09■■□□□ 1.93
PHGDH-227ENST00000641811 MLECQ14165 292 aa27.08■■□□□ 1.93
PHGDH-227ENST00000641811 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
PHGDH-227ENST00000641811 MADDQ8WXG6 1647 aa27.03■■□□□ 1.92
PHGDH-227ENST00000641811 ATP7AQ04656 1500 aa27.02■■□□□ 1.92
PHGDH-227ENST00000641811 INO80Q9ULG1 1556 aaPredicted RBP27.01■■□□□ 1.92
PHGDH-227ENST00000641811 REREQ9P2R6 1566 aa27■■□□□ 1.91
PHGDH-227ENST00000641811 MIA2Q96PC5 1412 aa26.99■■□□□ 1.91
PHGDH-227ENST00000641811 PTPRMP28827 1452 aa26.98■■□□□ 1.91
PHGDH-227ENST00000641811 CCDC141Q6ZP82 1450 aa26.98■■□□□ 1.91
PHGDH-227ENST00000641811 RIMS1Q86UR5 1692 aaKnown RBP26.95■■□□□ 1.91
PHGDH-227ENST00000641811 ARHGEF5Q12774 1597 aa26.94■■□□□ 1.9
PHGDH-227ENST00000641811 RSPH4AQ5TD94 716 aa26.94■■□□□ 1.9
PHGDH-227ENST00000641811 AGLP35573 1532 aa26.93■■□□□ 1.9
PHGDH-227ENST00000641811 RTEL1-TNFRSF6BF6WH68 1400 aa26.92■■□□□ 1.9
PHGDH-227ENST00000641811 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
PHGDH-227ENST00000641811 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
PHGDH-227ENST00000641811 A2MP01023 1474 aa26.9■■□□□ 1.9
PHGDH-227ENST00000641811 PLPPR3Q6T4P5 718 aa26.9■■□□□ 1.9
PHGDH-227ENST00000641811 TSPY4P0CV99 314 aa26.89■■□□□ 1.9
PHGDH-227ENST00000641811 TSPY10P0CW01 314 aa26.89■■□□□ 1.9
PHGDH-227ENST00000641811 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
PHGDH-227ENST00000641811 FER1L4A9Z1Z3 1794 aa26.89■■□□□ 1.89
PHGDH-227ENST00000641811 PLXNC1O60486 1568 aa26.86■■□□□ 1.89
PHGDH-227ENST00000641811 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
PHGDH-227ENST00000641811 TCOF1Q13428 1488 aaKnown RBP26.83■■□□□ 1.89
PHGDH-227ENST00000641811 DHX29Q7Z478 1369 aaKnown RBP26.82■■□□□ 1.88
PHGDH-227ENST00000641811 CEBPAP49715 358 aaPredicted RBP26.8■■□□□ 1.88
PHGDH-227ENST00000641811 ABCC5O15440 1437 aa26.8■■□□□ 1.88
PHGDH-227ENST00000641811 MAST1Q9Y2H9 1570 aa26.79■■□□□ 1.88
PHGDH-227ENST00000641811 GGT6Q6P531 493 aa26.77■■□□□ 1.88
PHGDH-227ENST00000641811 ESF1Q9H501 851 aaKnown RBP26.77■■□□□ 1.88
PHGDH-227ENST00000641811 FAM50AQ14320 339 aaKnown RBP26.76■■□□□ 1.87
PHGDH-227ENST00000641811 DAPK1P53355 1430 aa26.75■■□□□ 1.87
PHGDH-227ENST00000641811 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
PHGDH-227ENST00000641811 KIF3BO15066 747 aa26.73■■□□□ 1.87
PHGDH-227ENST00000641811 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
PHGDH-227ENST00000641811 CHIC2Q9UKJ5 165 aa26.71■■□□□ 1.87
PHGDH-227ENST00000641811 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
PHGDH-227ENST00000641811 CNTLNQ9NXG0 1405 aa26.68■■□□□ 1.86
PHGDH-227ENST00000641811 RRP7BPQ9NSQ0 103 aa26.68■■□□□ 1.86
PHGDH-227ENST00000641811 C3P01024 1663 aa26.66■■□□□ 1.86
PHGDH-227ENST00000641811 KIF15Q9NS87 1388 aa26.65■■□□□ 1.86
PHGDH-227ENST00000641811 CLTCQ00610 1675 aaKnown RBP26.65■■□□□ 1.86
PHGDH-227ENST00000641811 LMTK3Q96Q04 1460 aa26.63■■□□□ 1.85
PHGDH-227ENST00000641811 ZMYM3Q14202 1370 aa26.63■■□□□ 1.85
PHGDH-227ENST00000641811 DUOX2Q9NRD8 1548 aa26.62■■□□□ 1.85
PHGDH-227ENST00000641811 PPP6R1Q9UPN7 881 aa26.62■■□□□ 1.85
PHGDH-227ENST00000641811 MROH2AA6NES4 1674 aa26.6■■□□□ 1.85
PHGDH-227ENST00000641811 ANKRD30AQ9BXX3 1397 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms