RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 ARHGAP5Q13017 1502 aa30.1■■■□□ 2.41
PHGDH-210ENST00000641115 PLCH2O75038 1416 aa30.07■■■□□ 2.41
PHGDH-210ENST00000641115 ARAP3Q8WWN8 1544 aa30.07■■■□□ 2.4
PHGDH-210ENST00000641115 CAMSAP2Q08AD1 1489 aa30.07■■■□□ 2.4
PHGDH-210ENST00000641115 GLI2P10070 1586 aa30.04■■■□□ 2.4
PHGDH-210ENST00000641115 DIP2BQ9P265 1576 aa30.04■■■□□ 2.4
PHGDH-210ENST00000641115 ZNF777Q9ULD5 760 aaPredicted RBP30.03■■■□□ 2.4
PHGDH-210ENST00000641115 SAMD9LQ8IVG5 1584 aa30.01■■■□□ 2.39
PHGDH-210ENST00000641115 MAP3K4Q9Y6R4 1608 aa29.99■■■□□ 2.39
PHGDH-210ENST00000641115 ZNF644Q9H582 1327 aaPredicted RBP29.99■■■□□ 2.39
PHGDH-210ENST00000641115 CD109Q6YHK3 1445 aa29.98■■■□□ 2.39
PHGDH-210ENST00000641115 ITGAEP38570 1179 aa29.98■■■□□ 2.39
PHGDH-210ENST00000641115 DNMT1P26358 1616 aaKnown RBP29.97■■■□□ 2.39
PHGDH-210ENST00000641115 EFCAB2Q5VUJ9 269 aa29.96■■■□□ 2.39
PHGDH-210ENST00000641115 CFAP74Q9C0B2 1584 aa29.94■■■□□ 2.38
PHGDH-210ENST00000641115 FANCAO15360 1455 aa29.94■■■□□ 2.38
PHGDH-210ENST00000641115 PLEKHH2Q8IVE3 1493 aa29.94■■■□□ 2.38
PHGDH-210ENST00000641115 KIF13AQ9H1H9 1805 aa29.93■■■□□ 2.38
PHGDH-210ENST00000641115 FAM69CQ0P6D2 419 aa29.92■■■□□ 2.38
PHGDH-210ENST00000641115 DAPK1P53355 1430 aa29.9■■■□□ 2.38
PHGDH-210ENST00000641115 CROCC2H7BZ55 1655 aa29.9■■■□□ 2.38
PHGDH-210ENST00000641115 SYCP2Q9BX26 1530 aa29.89■■■□□ 2.38
PHGDH-210ENST00000641115 ARHGEF5Q12774 1597 aa29.89■■■□□ 2.38
PHGDH-210ENST00000641115 ABCC1P33527 1531 aa29.89■■■□□ 2.37
PHGDH-210ENST00000641115 KIAA1107Q9UPP5 1409 aa29.86■■■□□ 2.37
PHGDH-210ENST00000641115 ABCC5O15440 1437 aa29.85■■■□□ 2.37
PHGDH-210ENST00000641115 MBD5Q9P267 1494 aa29.84■■■□□ 2.37
PHGDH-210ENST00000641115 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
PHGDH-210ENST00000641115 CCDC141Q6ZP82 1450 aa29.82■■■□□ 2.36
PHGDH-210ENST00000641115 TSPOAP1O95153 1857 aa29.82■■■□□ 2.36
PHGDH-210ENST00000641115 HNRNPMP52272 730 aaKnown RBP eCLIP29.81■■■□□ 2.361e-6■■■■□ 22.8
PHGDH-210ENST00000641115 ADGRL1O94910 1474 aa29.8■■■□□ 2.36
PHGDH-210ENST00000641115 NEO1Q92859 1461 aa29.8■■■□□ 2.36
PHGDH-210ENST00000641115 RSPH4AQ5TD94 716 aa29.8■■■□□ 2.36
PHGDH-210ENST00000641115 ADGBQ8N7X0 1667 aa29.8■■■□□ 2.36
PHGDH-210ENST00000641115 AKNAQ7Z591 1439 aa29.79■■■□□ 2.36
PHGDH-210ENST00000641115 SHANK2Q9UPX8 1470 aa29.79■■■□□ 2.36
PHGDH-210ENST00000641115 ARHGEF12Q9NZN5 1544 aa29.78■■■□□ 2.36
PHGDH-210ENST00000641115 PPRC1Q5VV67 1664 aaKnown RBP29.77■■■□□ 2.36
PHGDH-210ENST00000641115 TEX14Q8IWB6 1497 aa29.76■■■□□ 2.35
PHGDH-210ENST00000641115 CHIC2Q9UKJ5 165 aa29.73■■■□□ 2.35
PHGDH-210ENST00000641115 SCAPERQ9BY12 1400 aa29.72■■■□□ 2.35
PHGDH-210ENST00000641115 TSPY4P0CV99 314 aa29.72■■■□□ 2.35
PHGDH-210ENST00000641115 TSPY10P0CW01 314 aa29.72■■■□□ 2.35
PHGDH-210ENST00000641115 C9orf84Q5VXU9 1444 aa29.72■■■□□ 2.35
PHGDH-210ENST00000641115 ROCK1Q13464 1354 aa29.71■■■□□ 2.35
PHGDH-210ENST00000641115 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
PHGDH-210ENST00000641115 MAST1Q9Y2H9 1570 aa29.71■■■□□ 2.35
PHGDH-210ENST00000641115 HFM1A2PYH4 1435 aa29.7■■■□□ 2.34
PHGDH-210ENST00000641115 ADGRL2O95490 1459 aa29.69■■■□□ 2.34
PHGDH-210ENST00000641115 TRAPPC8Q9Y2L5 1435 aa29.69■■■□□ 2.34
PHGDH-210ENST00000641115 SETD5Q9C0A6 1442 aa29.67■■■□□ 2.34
PHGDH-210ENST00000641115 ANKRD30AQ9BXX3 1397 aa29.65■■■□□ 2.34
PHGDH-210ENST00000641115 ZNF518AQ6AHZ1 1483 aa29.65■■■□□ 2.34
PHGDH-210ENST00000641115 NAIPQ13075 1403 aa29.64■■■□□ 2.34
PHGDH-210ENST00000641115 RRP7BPQ9NSQ0 103 aa29.63■■■□□ 2.33
PHGDH-210ENST00000641115 NCOA1Q15788 1441 aa29.63■■■□□ 2.33
PHGDH-210ENST00000641115 POGZQ7Z3K3 1410 aa29.63■■■□□ 2.33
PHGDH-210ENST00000641115 TRHP20396 242 aaPredicted RBP29.61■■■□□ 2.33
PHGDH-210ENST00000641115 PLXNC1O60486 1568 aa29.61■■■□□ 2.33
PHGDH-210ENST00000641115 DENND4BO75064 1496 aaPredicted RBP29.6■■■□□ 2.33
PHGDH-210ENST00000641115 RAB3GAP2Q9H2M9 1393 aa29.6■■■□□ 2.33
PHGDH-210ENST00000641115 AFAP1Q8N556 730 aa29.6■■■□□ 2.33
PHGDH-210ENST00000641115 INO80Q9ULG1 1556 aaPredicted RBP29.59■■■□□ 2.33
PHGDH-210ENST00000641115 KDM5CP41229 1560 aa29.58■■■□□ 2.33
PHGDH-210ENST00000641115 ZFYVE16Q7Z3T8 1539 aa29.58■■■□□ 2.33
PHGDH-210ENST00000641115 RICTORQ6R327 1708 aa29.58■■■□□ 2.33
PHGDH-210ENST00000641115 SPAG9O60271 1321 aaKnown RBP29.57■■■□□ 2.32
PHGDH-210ENST00000641115 RTEL1-TNFRSF6BF6WH68 1400 aa29.56■■■□□ 2.32
PHGDH-210ENST00000641115 ATP7AQ04656 1500 aa29.56■■■□□ 2.32
PHGDH-210ENST00000641115 KIF15Q9NS87 1388 aa29.52■■■□□ 2.32
PHGDH-210ENST00000641115 HECW2Q9P2P5 1572 aa29.52■■■□□ 2.32
PHGDH-210ENST00000641115 FRMPD1Q5SYB0 1578 aa29.5■■■□□ 2.31
PHGDH-210ENST00000641115 HRCP23327 699 aa29.49■■■□□ 2.31
PHGDH-210ENST00000641115 KIDINS220Q9ULH0 1771 aa29.49■■■□□ 2.31
PHGDH-210ENST00000641115 KDM6BO15054 1643 aa29.49■■■□□ 2.31
PHGDH-210ENST00000641115 RAPGEF3O95398 923 aa29.48■■■□□ 2.31
PHGDH-210ENST00000641115 MYT1LQ9UL68 1186 aa29.48■■■□□ 2.31
PHGDH-210ENST00000641115 MLH3Q9UHC1 1453 aa29.48■■■□□ 2.31
PHGDH-210ENST00000641115 ANKRD50Q9ULJ7 1429 aa29.46■■■□□ 2.31
PHGDH-210ENST00000641115 DUOX2Q9NRD8 1548 aa29.46■■■□□ 2.31
PHGDH-210ENST00000641115 ZMYM4Q5VZL5 1548 aa29.44■■■□□ 2.3
PHGDH-210ENST00000641115 ACIN1Q9UKV3 1341 aaKnown RBP29.41■■■□□ 2.3
PHGDH-210ENST00000641115 ERBINQ96RT1 1412 aa29.39■■■□□ 2.29
PHGDH-210ENST00000641115 ABCA6Q8N139 1617 aa29.38■■■□□ 2.29
PHGDH-210ENST00000641115 COL17A1Q9UMD9 1497 aaPredicted RBP29.36■■■□□ 2.29
PHGDH-210ENST00000641115 MAGI2Q86UL8 1455 aa29.35■■■□□ 2.29
PHGDH-210ENST00000641115 CCER1Q8TC90 406 aaPredicted RBP29.35■■■□□ 2.29
PHGDH-210ENST00000641115 DIP2CQ9Y2E4 1556 aa29.33■■■□□ 2.29
PHGDH-210ENST00000641115 DHX57Q6P158 1386 aaKnown RBP29.32■■■□□ 2.28
PHGDH-210ENST00000641115 EIF2AK4Q9P2K8 1649 aaKnown RBP29.32■■■□□ 2.28
PHGDH-210ENST00000641115 A2MP01023 1474 aa29.31■■■□□ 2.28
PHGDH-210ENST00000641115 TRIM52Q96A61 297 aa29.3■■■□□ 2.28
PHGDH-210ENST00000641115 DHX29Q7Z478 1369 aaKnown RBP29.29■■■□□ 2.28
PHGDH-210ENST00000641115 UNC13BO14795 1591 aa29.27■■■□□ 2.28
PHGDH-210ENST00000641115 YEATS2Q9ULM3 1422 aa29.27■■■□□ 2.28
PHGDH-210ENST00000641115 ARHGEF40Q8TER5 1519 aa29.24■■■□□ 2.27
PHGDH-210ENST00000641115 KDM5DQ9BY66 1539 aa29.22■■■□□ 2.27
PHGDH-210ENST00000641115 DEPDC5O75140 1603 aa29.21■■■□□ 2.27
PHGDH-210ENST00000641115 BCORL1Q5H9F3 1711 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms