RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
SCARB2-223ENST00000640640 SAFB2Q14151 953 aaKnown RBP eCLIP22.89■■□□□ 1.26
SCARB2-223ENST00000640640 FRAT1Q92837 279 aaPredicted RBP22.89■■□□□ 1.26
SCARB2-223ENST00000640640 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.25
SCARB2-223ENST00000640640 SRPK2P78362 688 aaKnown RBP22.88■■□□□ 1.25
SCARB2-223ENST00000640640 ANP32BQ92688 251 aaKnown RBP22.87■■□□□ 1.25
SCARB2-223ENST00000640640 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
SCARB2-223ENST00000640640 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
SCARB2-223ENST00000640640 LAS1LQ9Y4W2 734 aaKnown RBP22.86■■□□□ 1.25
SCARB2-223ENST00000640640 RALBP1Q15311 655 aa22.86■■□□□ 1.25
SCARB2-223ENST00000640640 PTPRGP23470 1445 aa22.86■■□□□ 1.25
SCARB2-223ENST00000640640 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
SCARB2-223ENST00000640640 RGS3P49796 1198 aa22.83■■□□□ 1.24
SCARB2-223ENST00000640640 FGD6Q6ZV73 1430 aa22.83■■□□□ 1.24
SCARB2-223ENST00000640640 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
SCARB2-223ENST00000640640 ARAP1Q96P48 1450 aa22.82■■□□□ 1.24
SCARB2-223ENST00000640640 BECN1Q14457 450 aa22.81■■□□□ 1.24
SCARB2-223ENST00000640640 STK26Q9P289 416 aa22.81■■□□□ 1.24
SCARB2-223ENST00000640640 LRRC9Q6ZRR7 1453 aa22.81■■□□□ 1.24
SCARB2-223ENST00000640640 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.24
SCARB2-223ENST00000640640 HDGFP51858 240 aaKnown RBP22.79■■□□□ 1.24
SCARB2-223ENST00000640640 MYOM3Q5VTT5 1437 aa22.78■■□□□ 1.24
SCARB2-223ENST00000640640 PRXQ9BXM0 1461 aa22.77■■□□□ 1.24
SCARB2-223ENST00000640640 ST20-MTHFSA0A0A6YYL1 179 aa22.76■■□□□ 1.23
SCARB2-223ENST00000640640 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
SCARB2-223ENST00000640640 ZNF644Q9H582 1327 aaPredicted RBP22.74■■□□□ 1.23
SCARB2-223ENST00000640640 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
SCARB2-223ENST00000640640 ARXQ96QS3 562 aa22.74■■□□□ 1.23
SCARB2-223ENST00000640640 CASKIN1Q8WXD9 1431 aa22.74■■□□□ 1.23
SCARB2-223ENST00000640640 CCDC144AA2RUR9 1427 aa22.73■■□□□ 1.23
SCARB2-223ENST00000640640 NLRP13Q86W25 1043 aa22.73■■□□□ 1.23
SCARB2-223ENST00000640640 MS4A1P11836 297 aa22.73■■□□□ 1.23
SCARB2-223ENST00000640640 ANP32EQ9BTT0 268 aa22.73■■□□□ 1.23
SCARB2-223ENST00000640640 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
SCARB2-223ENST00000640640 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
SCARB2-223ENST00000640640 RCAN3Q9UKA8 241 aa22.71■■□□□ 1.23
SCARB2-223ENST00000640640 LMOD2Q6P5Q4 547 aa22.7■■□□□ 1.22
SCARB2-223ENST00000640640 NESP48681 1621 aa22.7■■□□□ 1.22
SCARB2-223ENST00000640640 EIF3AQ14152 1382 aaKnown RBP22.69■■□□□ 1.22
SCARB2-223ENST00000640640 WASHC2CQ9Y4E1 1318 aa22.69■■□□□ 1.22
SCARB2-223ENST00000640640 CUX1P39880 1505 aa22.68■■□□□ 1.22
SCARB2-223ENST00000640640 PRKRIP1Q9H875 184 aaPredicted RBP22.68■■□□□ 1.22
SCARB2-223ENST00000640640 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
SCARB2-223ENST00000640640 HDGFL2Q7Z4V5 671 aaPredicted RBP22.67■■□□□ 1.22
SCARB2-223ENST00000640640 A0A0G2JS52 829 aa22.67■■□□□ 1.22
SCARB2-223ENST00000640640 SOX12O15370 315 aa22.66■■□□□ 1.22
SCARB2-223ENST00000640640 CHMP4BQ9H444 224 aaKnown RBP22.66■■□□□ 1.22
SCARB2-223ENST00000640640 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
SCARB2-223ENST00000640640 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
SCARB2-223ENST00000640640 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
SCARB2-223ENST00000640640 RBM19Q9Y4C8 960 aaKnown RBP22.65■■□□□ 1.22
SCARB2-223ENST00000640640 RRBP1Q9P2E9 1410 aaKnown RBP22.65■■□□□ 1.22
SCARB2-223ENST00000640640 TRHP20396 242 aaPredicted RBP22.64■■□□□ 1.21
SCARB2-223ENST00000640640 USP47Q96K76 1375 aa22.63■■□□□ 1.21
SCARB2-223ENST00000640640 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
SCARB2-223ENST00000640640 HAP1P54257 671 aaPredicted RBP22.62■■□□□ 1.21
SCARB2-223ENST00000640640 NOP58Q9Y2X3 529 aaKnown RBP22.61■■□□□ 1.21
SCARB2-223ENST00000640640 KIF15Q9NS87 1388 aa22.61■■□□□ 1.21
SCARB2-223ENST00000640640 FYCO1Q9BQS8 1478 aa22.61■■□□□ 1.21
SCARB2-223ENST00000640640 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
SCARB2-223ENST00000640640 NUTM2DQ5VT03 806 aaPredicted RBP22.6■■□□□ 1.21
SCARB2-223ENST00000640640 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
SCARB2-223ENST00000640640 PANK3Q9H999 370 aa22.58■■□□□ 1.2
SCARB2-223ENST00000640640 TRAK1Q9UPV9 953 aa22.58■■□□□ 1.2
SCARB2-223ENST00000640640 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
SCARB2-223ENST00000640640 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
SCARB2-223ENST00000640640 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
SCARB2-223ENST00000640640 PDE3BQ13370 1112 aa22.56■■□□□ 1.2
SCARB2-223ENST00000640640 EIF5BO60841 1220 aaKnown RBP22.56■■□□□ 1.2
SCARB2-223ENST00000640640 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
SCARB2-223ENST00000640640 CASC1Q6TDU7 716 aa22.55■■□□□ 1.2
SCARB2-223ENST00000640640 TERF2IPQ9NYB0 399 aa22.53■■□□□ 1.2
SCARB2-223ENST00000640640 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
SCARB2-223ENST00000640640 GOLGA6L22H0YM25 854 aa22.52■■□□□ 1.2
SCARB2-223ENST00000640640 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
SCARB2-223ENST00000640640 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
SCARB2-223ENST00000640640 CCDC146Q8IYE0 955 aa22.5■■□□□ 1.19
SCARB2-223ENST00000640640 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
SCARB2-223ENST00000640640 IPO8O15397 1037 aaKnown RBP22.48■■□□□ 1.19
SCARB2-223ENST00000640640 OSCARQ8IYS5 282 aa22.48■■□□□ 1.19
SCARB2-223ENST00000640640 ZBED9Q6R2W3 1325 aa22.46■■□□□ 1.19
SCARB2-223ENST00000640640 RTF1Q92541 710 aaKnown RBP22.45■■□□□ 1.18
SCARB2-223ENST00000640640 CCDC7Q96M83 1385 aa22.45■■□□□ 1.18
SCARB2-223ENST00000640640 KIF7Q2M1P5 1343 aa22.44■■□□□ 1.18
SCARB2-223ENST00000640640 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
SCARB2-223ENST00000640640 TCERG1O14776 1098 aaKnown RBP22.44■■□□□ 1.18
SCARB2-223ENST00000640640 VGFO15240 615 aaPredicted RBP22.44■■□□□ 1.18
SCARB2-223ENST00000640640 CALD1Q05682 793 aaKnown RBP22.43■■□□□ 1.18
SCARB2-223ENST00000640640 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
SCARB2-223ENST00000640640 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
SCARB2-223ENST00000640640 NCLP19338 710 aaKnown RBP22.42■■□□□ 1.18
SCARB2-223ENST00000640640 DNMBPQ6XZF7 1577 aa22.41■■□□□ 1.18
SCARB2-223ENST00000640640 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
SCARB2-223ENST00000640640 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
SCARB2-223ENST00000640640 OS9Q13438 667 aaPredicted RBP22.38■■□□□ 1.17
SCARB2-223ENST00000640640 WASHC2AQ641Q2 1341 aa22.38■■□□□ 1.17
SCARB2-223ENST00000640640 RWDD1Q9H446 243 aaPredicted RBP22.38■■□□□ 1.17
SCARB2-223ENST00000640640 ITPRIPQ8IWB1 547 aa22.37■■□□□ 1.17
SCARB2-223ENST00000640640 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
SCARB2-223ENST00000640640 CLUAP1Q96AJ1 413 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms