RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 FGD6Q6ZV73 1430 aa13.34□□□□□ -0.27
HLA-B-258ENST00000640615 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
HLA-B-258ENST00000640615 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
HLA-B-258ENST00000640615 MIA2Q96PC5 1412 aa13.32□□□□□ -0.28
HLA-B-258ENST00000640615 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
HLA-B-258ENST00000640615 ADGRL1O94910 1474 aa13.31□□□□□ -0.28
HLA-B-258ENST00000640615 ITGAEP38570 1179 aa13.3□□□□□ -0.28
HLA-B-258ENST00000640615 ZNF644Q9H582 1327 aaPredicted RBP13.3□□□□□ -0.28
HLA-B-258ENST00000640615 PLCH2O75038 1416 aa13.3□□□□□ -0.28
HLA-B-258ENST00000640615 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
HLA-B-258ENST00000640615 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
HLA-B-258ENST00000640615 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
HLA-B-258ENST00000640615 ABCA9Q8IUA7 1624 aa13.28□□□□□ -0.28
HLA-B-258ENST00000640615 PTPN23Q9H3S7 1636 aa13.28□□□□□ -0.28
HLA-B-258ENST00000640615 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
HLA-B-258ENST00000640615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-B-258ENST00000640615 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
HLA-B-258ENST00000640615 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
HLA-B-258ENST00000640615 PREX2Q70Z35 1606 aa13.25□□□□□ -0.29
HLA-B-258ENST00000640615 MYO5CQ9NQX4 1742 aa13.25□□□□□ -0.29
HLA-B-258ENST00000640615 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
HLA-B-258ENST00000640615 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
HLA-B-258ENST00000640615 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
HLA-B-258ENST00000640615 FANCAO15360 1455 aa13.23□□□□□ -0.29
HLA-B-258ENST00000640615 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
HLA-B-258ENST00000640615 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
HLA-B-258ENST00000640615 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
HLA-B-258ENST00000640615 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
HLA-B-258ENST00000640615 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
HLA-B-258ENST00000640615 ABCC5O15440 1437 aa13.19□□□□□ -0.3
HLA-B-258ENST00000640615 AKNAQ7Z591 1439 aa13.19□□□□□ -0.3
HLA-B-258ENST00000640615 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
HLA-B-258ENST00000640615 TSPY4P0CV99 314 aa13.18□□□□□ -0.3
HLA-B-258ENST00000640615 TSPY10P0CW01 314 aa13.18□□□□□ -0.3
HLA-B-258ENST00000640615 DAPK1P53355 1430 aa13.18□□□□□ -0.3
HLA-B-258ENST00000640615 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
HLA-B-258ENST00000640615 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
HLA-B-258ENST00000640615 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
HLA-B-258ENST00000640615 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
HLA-B-258ENST00000640615 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
HLA-B-258ENST00000640615 ARHGEF12Q9NZN5 1544 aa13.16□□□□□ -0.3
HLA-B-258ENST00000640615 NEO1Q92859 1461 aa13.16□□□□□ -0.3
HLA-B-258ENST00000640615 ABCC1P33527 1531 aa13.15□□□□□ -0.3
HLA-B-258ENST00000640615 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
HLA-B-258ENST00000640615 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
HLA-B-258ENST00000640615 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
HLA-B-258ENST00000640615 AFAP1Q8N556 730 aa13.14□□□□□ -0.31
HLA-B-258ENST00000640615 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
HLA-B-258ENST00000640615 ARHGEF5Q12774 1597 aa13.13□□□□□ -0.31
HLA-B-258ENST00000640615 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
HLA-B-258ENST00000640615 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
HLA-B-258ENST00000640615 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
HLA-B-258ENST00000640615 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
HLA-B-258ENST00000640615 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
HLA-B-258ENST00000640615 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
HLA-B-258ENST00000640615 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
HLA-B-258ENST00000640615 ROCK1Q13464 1354 aa13.1□□□□□ -0.31
HLA-B-258ENST00000640615 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
HLA-B-258ENST00000640615 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
HLA-B-258ENST00000640615 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
HLA-B-258ENST00000640615 FRMPD1Q5SYB0 1578 aa13.09□□□□□ -0.31
HLA-B-258ENST00000640615 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
HLA-B-258ENST00000640615 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
HLA-B-258ENST00000640615 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
HLA-B-258ENST00000640615 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
HLA-B-258ENST00000640615 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
HLA-B-258ENST00000640615 NAIPQ13075 1403 aa13.06□□□□□ -0.32
HLA-B-258ENST00000640615 CROCC2H7BZ55 1655 aa13.06□□□□□ -0.32
HLA-B-258ENST00000640615 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
HLA-B-258ENST00000640615 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
HLA-B-258ENST00000640615 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
HLA-B-258ENST00000640615 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
HLA-B-258ENST00000640615 KIF15Q9NS87 1388 aa13.05□□□□□ -0.32
HLA-B-258ENST00000640615 BCORL1Q5H9F3 1711 aa13.04□□□□□ -0.32
HLA-B-258ENST00000640615 RICTORQ6R327 1708 aa13.04□□□□□ -0.32
HLA-B-258ENST00000640615 PTPRMP28827 1452 aa13.04□□□□□ -0.32
HLA-B-258ENST00000640615 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
HLA-B-258ENST00000640615 HRCP23327 699 aa13.02□□□□□ -0.33
HLA-B-258ENST00000640615 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
HLA-B-258ENST00000640615 MLH3Q9UHC1 1453 aa13.01□□□□□ -0.33
HLA-B-258ENST00000640615 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
HLA-B-258ENST00000640615 ZFYVE16Q7Z3T8 1539 aa13.01□□□□□ -0.33
HLA-B-258ENST00000640615 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
HLA-B-258ENST00000640615 KDM5CP41229 1560 aa13.01□□□□□ -0.33
HLA-B-258ENST00000640615 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
HLA-B-258ENST00000640615 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
HLA-B-258ENST00000640615 TRIM52Q96A61 297 aa12.99□□□□□ -0.33
HLA-B-258ENST00000640615 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
HLA-B-258ENST00000640615 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
HLA-B-258ENST00000640615 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
HLA-B-258ENST00000640615 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
HLA-B-258ENST00000640615 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
HLA-B-258ENST00000640615 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.33
HLA-B-258ENST00000640615 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
HLA-B-258ENST00000640615 ACIN1Q9UKV3 1341 aaKnown RBP12.96□□□□□ -0.33
HLA-B-258ENST00000640615 CCER1Q8TC90 406 aaPredicted RBP12.96□□□□□ -0.33
HLA-B-258ENST00000640615 MAGI2Q86UL8 1455 aa12.96□□□□□ -0.34
HLA-B-258ENST00000640615 A2MP01023 1474 aa12.95□□□□□ -0.34
HLA-B-258ENST00000640615 ERBINQ96RT1 1412 aa12.95□□□□□ -0.34
HLA-B-258ENST00000640615 SIGLEC1Q9BZZ2 1709 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms