RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 ITSN2Q9NZM3 1697 aa13.78□□□□□ -0.2
HNRNPU-218ENST00000639064 TCOF1Q13428 1488 aaKnown RBP13.76□□□□□ -0.21
HNRNPU-218ENST00000639064 PREX2Q70Z35 1606 aa13.76□□□□□ -0.21
HNRNPU-218ENST00000639064 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
HNRNPU-218ENST00000639064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.75□□□□□ -0.21
HNRNPU-218ENST00000639064 MYO5CQ9NQX4 1742 aa13.75□□□□□ -0.21
HNRNPU-218ENST00000639064 ABCA9Q8IUA7 1624 aa13.75□□□□□ -0.21
HNRNPU-218ENST00000639064 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
HNRNPU-218ENST00000639064 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
HNRNPU-218ENST00000639064 PLCH2O75038 1416 aa13.74□□□□□ -0.21
HNRNPU-218ENST00000639064 PTPRKQ15262 1439 aa13.72□□□□□ -0.21
HNRNPU-218ENST00000639064 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
HNRNPU-218ENST00000639064 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
HNRNPU-218ENST00000639064 CD109Q6YHK3 1445 aa13.69□□□□□ -0.22
HNRNPU-218ENST00000639064 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
HNRNPU-218ENST00000639064 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
HNRNPU-218ENST00000639064 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
HNRNPU-218ENST00000639064 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
HNRNPU-218ENST00000639064 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
HNRNPU-218ENST00000639064 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
HNRNPU-218ENST00000639064 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
HNRNPU-218ENST00000639064 ABCC5O15440 1437 aa13.68□□□□□ -0.22
HNRNPU-218ENST00000639064 DAPK1P53355 1430 aa13.68□□□□□ -0.22
HNRNPU-218ENST00000639064 FANCAO15360 1455 aa13.67□□□□□ -0.22
HNRNPU-218ENST00000639064 DNMT1P26358 1616 aaKnown RBP13.67□□□□□ -0.22
HNRNPU-218ENST00000639064 ARAP3Q8WWN8 1544 aa13.66□□□□□ -0.22
HNRNPU-218ENST00000639064 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
HNRNPU-218ENST00000639064 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
HNRNPU-218ENST00000639064 GLI2P10070 1586 aa13.66□□□□□ -0.22
HNRNPU-218ENST00000639064 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
HNRNPU-218ENST00000639064 MAP3K4Q9Y6R4 1608 aa13.64□□□□□ -0.23
HNRNPU-218ENST00000639064 ABCC1P33527 1531 aa13.63□□□□□ -0.23
HNRNPU-218ENST00000639064 RRP7BPQ9NSQ0 103 aa13.62□□□□□ -0.23
HNRNPU-218ENST00000639064 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
HNRNPU-218ENST00000639064 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
HNRNPU-218ENST00000639064 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 CROCC2H7BZ55 1655 aa13.61□□□□□ -0.23
HNRNPU-218ENST00000639064 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
HNRNPU-218ENST00000639064 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
HNRNPU-218ENST00000639064 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 SCAPERQ9BY12 1400 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 AFAP1Q8N556 730 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 RAB3GAP2Q9H2M9 1393 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 NAIPQ13075 1403 aa13.59□□□□□ -0.23
HNRNPU-218ENST00000639064 RSPH4AQ5TD94 716 aa13.58□□□□□ -0.24
HNRNPU-218ENST00000639064 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
HNRNPU-218ENST00000639064 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
HNRNPU-218ENST00000639064 PPRC1Q5VV67 1664 aaKnown RBP13.57□□□□□ -0.24
HNRNPU-218ENST00000639064 ROCK1Q13464 1354 aa13.57□□□□□ -0.24
HNRNPU-218ENST00000639064 CFAP74Q9C0B2 1584 aa13.57□□□□□ -0.24
HNRNPU-218ENST00000639064 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
HNRNPU-218ENST00000639064 NEO1Q92859 1461 aa13.56□□□□□ -0.24
HNRNPU-218ENST00000639064 CENPBP07199 599 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-218ENST00000639064 ADGRL2O95490 1459 aa13.55□□□□□ -0.24
HNRNPU-218ENST00000639064 ADGBQ8N7X0 1667 aa13.55□□□□□ -0.24
HNRNPU-218ENST00000639064 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-218ENST00000639064 ANKRD30AQ9BXX3 1397 aa13.54□□□□□ -0.24
HNRNPU-218ENST00000639064 KDM6BO15054 1643 aa13.54□□□□□ -0.24
HNRNPU-218ENST00000639064 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
HNRNPU-218ENST00000639064 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
HNRNPU-218ENST00000639064 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
HNRNPU-218ENST00000639064 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.24
HNRNPU-218ENST00000639064 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
HNRNPU-218ENST00000639064 POGZQ7Z3K3 1410 aa13.52□□□□□ -0.25
HNRNPU-218ENST00000639064 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
HNRNPU-218ENST00000639064 ZNF518AQ6AHZ1 1483 aa13.51□□□□□ -0.25
HNRNPU-218ENST00000639064 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
HNRNPU-218ENST00000639064 DENND4BO75064 1496 aaPredicted RBP13.5□□□□□ -0.25
HNRNPU-218ENST00000639064 ZFYVE16Q7Z3T8 1539 aa13.5□□□□□ -0.25
HNRNPU-218ENST00000639064 ATP7AQ04656 1500 aa13.48□□□□□ -0.25
HNRNPU-218ENST00000639064 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
HNRNPU-218ENST00000639064 INO80Q9ULG1 1556 aaPredicted RBP13.48□□□□□ -0.25
HNRNPU-218ENST00000639064 RTEL1-TNFRSF6BF6WH68 1400 aa13.48□□□□□ -0.25
HNRNPU-218ENST00000639064 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
HNRNPU-218ENST00000639064 KDM5CP41229 1560 aa13.47□□□□□ -0.25
HNRNPU-218ENST00000639064 DHX57Q6P158 1386 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-218ENST00000639064 RICTORQ6R327 1708 aa13.47□□□□□ -0.25
HNRNPU-218ENST00000639064 COL17A1Q9UMD9 1497 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-218ENST00000639064 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.25
HNRNPU-218ENST00000639064 KIDINS220Q9ULH0 1771 aa13.46□□□□□ -0.26
HNRNPU-218ENST00000639064 TRIM52Q96A61 297 aa13.44□□□□□ -0.26
HNRNPU-218ENST00000639064 MLH3Q9UHC1 1453 aa13.44□□□□□ -0.26
HNRNPU-218ENST00000639064 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
HNRNPU-218ENST00000639064 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
HNRNPU-218ENST00000639064 YEATS2Q9ULM3 1422 aa13.41□□□□□ -0.26
HNRNPU-218ENST00000639064 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
HNRNPU-218ENST00000639064 ERBINQ96RT1 1412 aa13.4□□□□□ -0.26
HNRNPU-218ENST00000639064 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
HNRNPU-218ENST00000639064 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
HNRNPU-218ENST00000639064 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
HNRNPU-218ENST00000639064 MYT1Q01538 1121 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms