RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 MLECQ14165 292 aa13.76□□□□□ -0.21
SMG7-216ENST00000638826 CLIP1P30622 1438 aa13.74□□□□□ -0.21
SMG7-216ENST00000638826 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
SMG7-216ENST00000638826 ATP10AO60312 1499 aa13.74□□□□□ -0.21
SMG7-216ENST00000638826 HECW1Q76N89 1606 aa13.73□□□□□ -0.21
SMG7-216ENST00000638826 HSPA2P54652 639 aa13.73□□□□□ -0.21
SMG7-216ENST00000638826 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
SMG7-216ENST00000638826 ARHGAP35Q9NRY4 1499 aa13.73□□□□□ -0.21
SMG7-216ENST00000638826 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
SMG7-216ENST00000638826 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
SMG7-216ENST00000638826 ZNF518AQ6AHZ1 1483 aa13.72□□□□□ -0.21
SMG7-216ENST00000638826 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.21
SMG7-216ENST00000638826 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
SMG7-216ENST00000638826 KIF14Q15058 1648 aa13.68□□□□□ -0.22
SMG7-216ENST00000638826 CHIC1Q5VXU3 224 aa13.68□□□□□ -0.22
SMG7-216ENST00000638826 AFAP1Q8N556 730 aa13.68□□□□□ -0.22
SMG7-216ENST00000638826 ARHGAP5Q13017 1502 aa13.68□□□□□ -0.22
SMG7-216ENST00000638826 ARHGEF12Q9NZN5 1544 aa13.68□□□□□ -0.22
SMG7-216ENST00000638826 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
SMG7-216ENST00000638826 CERKQ8TCT0 537 aa13.65□□□□□ -0.22
SMG7-216ENST00000638826 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
SMG7-216ENST00000638826 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
SMG7-216ENST00000638826 KDM5CP41229 1560 aa13.63□□□□□ -0.23
SMG7-216ENST00000638826 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
SMG7-216ENST00000638826 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
SMG7-216ENST00000638826 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
SMG7-216ENST00000638826 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
SMG7-216ENST00000638826 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
SMG7-216ENST00000638826 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
SMG7-216ENST00000638826 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
SMG7-216ENST00000638826 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
SMG7-216ENST00000638826 AGLP35573 1532 aa13.58□□□□□ -0.24
SMG7-216ENST00000638826 CNTLNQ9NXG0 1405 aa13.57□□□□□ -0.24
SMG7-216ENST00000638826 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
SMG7-216ENST00000638826 DIP2CQ9Y2E4 1556 aa13.57□□□□□ -0.24
SMG7-216ENST00000638826 ABCC1P33527 1531 aa13.56□□□□□ -0.24
SMG7-216ENST00000638826 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
SMG7-216ENST00000638826 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
SMG7-216ENST00000638826 ZNF777Q9ULD5 760 aaPredicted RBP13.54□□□□□ -0.24
SMG7-216ENST00000638826 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
SMG7-216ENST00000638826 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
SMG7-216ENST00000638826 PTPRTO14522 1441 aa13.53□□□□□ -0.24
SMG7-216ENST00000638826 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
SMG7-216ENST00000638826 PLEKHH2Q8IVE3 1493 aa13.51□□□□□ -0.25
SMG7-216ENST00000638826 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
SMG7-216ENST00000638826 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
SMG7-216ENST00000638826 NPATQ14207 1427 aa13.5□□□□□ -0.25
SMG7-216ENST00000638826 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
SMG7-216ENST00000638826 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
SMG7-216ENST00000638826 HNRNPMP52272 730 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■□□□□ 8.9
SMG7-216ENST00000638826 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
SMG7-216ENST00000638826 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
SMG7-216ENST00000638826 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
SMG7-216ENST00000638826 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
SMG7-216ENST00000638826 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
SMG7-216ENST00000638826 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
SMG7-216ENST00000638826 SYCP2Q9BX26 1530 aa13.46□□□□□ -0.25
SMG7-216ENST00000638826 LRRIQ1Q96JM4 1722 aa13.46□□□□□ -0.25
SMG7-216ENST00000638826 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
SMG7-216ENST00000638826 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
SMG7-216ENST00000638826 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
SMG7-216ENST00000638826 A2MP01023 1474 aa13.44□□□□□ -0.26
SMG7-216ENST00000638826 C3P01024 1663 aa13.44□□□□□ -0.26
SMG7-216ENST00000638826 IQSEC2Q5JU85 1478 aa13.43□□□□□ -0.26
SMG7-216ENST00000638826 PKD2Q13563 968 aa13.43□□□□□ -0.26
SMG7-216ENST00000638826 GGT6Q6P531 493 aa13.43□□□□□ -0.26
SMG7-216ENST00000638826 ATP7AQ04656 1500 aa13.43□□□□□ -0.26
SMG7-216ENST00000638826 STRCQ7RTU9 1775 aa13.42□□□□□ -0.26
SMG7-216ENST00000638826 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
SMG7-216ENST00000638826 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
SMG7-216ENST00000638826 PLA2R1Q13018 1463 aa13.39□□□□□ -0.27
SMG7-216ENST00000638826 PLXNC1O60486 1568 aa13.39□□□□□ -0.27
SMG7-216ENST00000638826 MROH2AA6NES4 1674 aa13.39□□□□□ -0.27
SMG7-216ENST00000638826 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
SMG7-216ENST00000638826 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
SMG7-216ENST00000638826 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
SMG7-216ENST00000638826 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
SMG7-216ENST00000638826 LTBP4Q8N2S1 1624 aa13.38□□□□□ -0.27
SMG7-216ENST00000638826 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
SMG7-216ENST00000638826 NCKAP5LQ9HCH0 1330 aa13.38□□□□□ -0.27
SMG7-216ENST00000638826 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
SMG7-216ENST00000638826 EHBP1L1Q8N3D4 1523 aa13.37□□□□□ -0.27
SMG7-216ENST00000638826 ZNF644Q9H582 1327 aaPredicted RBP13.37□□□□□ -0.27
SMG7-216ENST00000638826 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
SMG7-216ENST00000638826 DHX29Q7Z478 1369 aaKnown RBP13.36□□□□□ -0.27
SMG7-216ENST00000638826 UBAP1LF5GYI3 381 aa13.34□□□□□ -0.27
SMG7-216ENST00000638826 TCOF1Q13428 1488 aaKnown RBP13.34□□□□□ -0.27
SMG7-216ENST00000638826 ZNF335Q9H4Z2 1342 aaPredicted RBP13.34□□□□□ -0.27
SMG7-216ENST00000638826 SOCS7O14512 581 aa13.33□□□□□ -0.28
SMG7-216ENST00000638826 KIF3BO15066 747 aa13.33□□□□□ -0.28
SMG7-216ENST00000638826 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.28
SMG7-216ENST00000638826 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
SMG7-216ENST00000638826 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
SMG7-216ENST00000638826 A2ML1A8K2U0 1454 aa13.31□□□□□ -0.28
SMG7-216ENST00000638826 CCDC141Q6ZP82 1450 aa13.31□□□□□ -0.28
SMG7-216ENST00000638826 FAM135AQ9P2D6 1515 aa13.31□□□□□ -0.28
SMG7-216ENST00000638826 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
SMG7-216ENST00000638826 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
SMG7-216ENST00000638826 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
SMG7-216ENST00000638826 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms