RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	SCAPER	Q9BY12	1400 aa		13.66	□□□□□ -0.22
SPTAN1-238	ENST00000637903	HECW1	Q76N89	1606 aa		13.66	□□□□□ -0.22
SPTAN1-238	ENST00000637903	EFCAB2	Q5VUJ9	269 aa		13.65	□□□□□ -0.22
SPTAN1-238	ENST00000637903	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.65	□□□□□ -0.22
SPTAN1-238	ENST00000637903	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.63	□□□□□ -0.23
SPTAN1-238	ENST00000637903	ATP10A	O60312	1499 aa		13.62	□□□□□ -0.23
SPTAN1-238	ENST00000637903	MYO5C	Q9NQX4	1742 aa		13.62	□□□□□ -0.23
SPTAN1-238	ENST00000637903	EHMT2	Q96KQ7	1210 aa		13.61	□□□□□ -0.23
SPTAN1-238	ENST00000637903	TRO	Q12816	1431 aa	Predicted RBP	13.61	□□□□□ -0.23
SPTAN1-238	ENST00000637903	KIF14	Q15058	1648 aa		13.6	□□□□□ -0.23
SPTAN1-238	ENST00000637903	ARHGEF12	Q9NZN5	1544 aa		13.59	□□□□□ -0.23
SPTAN1-238	ENST00000637903	C9orf84	Q5VXU9	1444 aa		13.59	□□□□□ -0.23
SPTAN1-238	ENST00000637903	FER1L4	A9Z1Z3	1794 aa		13.59	□□□□□ -0.23
SPTAN1-238	ENST00000637903	HSPA2	P54652	639 aa		13.59	□□□□□ -0.23
SPTAN1-238	ENST00000637903	MLEC	Q14165	292 aa		13.59	□□□□□ -0.23
SPTAN1-238	ENST00000637903	LRRIQ1	Q96JM4	1722 aa		13.59	□□□□□ -0.23
SPTAN1-238	ENST00000637903	ZNF518A	Q6AHZ1	1483 aa		13.58	□□□□□ -0.24
SPTAN1-238	ENST00000637903	KDM5C	P41229	1560 aa		13.57	□□□□□ -0.24
SPTAN1-238	ENST00000637903	CLIP1	P30622	1438 aa		13.56	□□□□□ -0.24
SPTAN1-238	ENST00000637903	PLPPR3	Q6T4P5	718 aa		13.56	□□□□□ -0.24
SPTAN1-238	ENST00000637903	AFAP1	Q8N556	730 aa		13.56	□□□□□ -0.24
SPTAN1-238	ENST00000637903	ARHGAP5	Q13017	1502 aa		13.55	□□□□□ -0.24
SPTAN1-238	ENST00000637903	CDC42BPB	Q9Y5S2	1711 aa		13.55	□□□□□ -0.24
SPTAN1-238	ENST00000637903	SETD1B	Q9UPS6	1966 aa	Known RBP	13.54	□□□□□ -0.24
SPTAN1-238	ENST00000637903	CASKIN1	Q8WXD9	1431 aa		13.54	□□□□□ -0.24
SPTAN1-238	ENST00000637903	MLH3	Q9UHC1	1453 aa		13.53	□□□□□ -0.24
SPTAN1-238	ENST00000637903	RERE	Q9P2R6	1566 aa		13.53	□□□□□ -0.24
SPTAN1-238	ENST00000637903	DIP2C	Q9Y2E4	1556 aa		13.51	□□□□□ -0.25
SPTAN1-238	ENST00000637903	CCDC18	Q5T9S5	1454 aa		13.51	□□□□□ -0.25
SPTAN1-238	ENST00000637903	CEBPA	P49715	358 aa	Predicted RBP	13.51	□□□□□ -0.25
SPTAN1-238	ENST00000637903	PREX1	Q8TCU6	1659 aa		13.5	□□□□□ -0.25
SPTAN1-238	ENST00000637903	PREX2	Q70Z35	1606 aa		13.5	□□□□□ -0.25
SPTAN1-238	ENST00000637903	TRAPPC8	Q9Y2L5	1435 aa		13.49	□□□□□ -0.25
SPTAN1-238	ENST00000637903	ABCC1	P33527	1531 aa		13.49	□□□□□ -0.25
SPTAN1-238	ENST00000637903	AGL	P35573	1532 aa		13.49	□□□□□ -0.25
SPTAN1-238	ENST00000637903	CERK	Q8TCT0	537 aa		13.48	□□□□□ -0.25
SPTAN1-238	ENST00000637903	MYT1L	Q9UL68	1186 aa		13.48	□□□□□ -0.25
SPTAN1-238	ENST00000637903	ABCA6	Q8N139	1617 aa		13.47	□□□□□ -0.25
SPTAN1-238	ENST00000637903	CDC42BPA	Q5VT25	1732 aa		13.47	□□□□□ -0.25
SPTAN1-238	ENST00000637903	ITSN2	Q9NZM3	1697 aa		13.47	□□□□□ -0.25
SPTAN1-238	ENST00000637903	FYCO1	Q9BQS8	1478 aa		13.46	□□□□□ -0.25
SPTAN1-238	ENST00000637903	STRC	Q7RTU9	1775 aa		13.45	□□□□□ -0.26
SPTAN1-238	ENST00000637903	KIDINS220	Q9ULH0	1771 aa		13.45	□□□□□ -0.26
SPTAN1-238	ENST00000637903	DMRT2	Q9Y5R5	561 aa		13.45	□□□□□ -0.26
SPTAN1-238	ENST00000637903	UHRF1BP1	Q6BDS2	1440 aa		13.45	□□□□□ -0.26
SPTAN1-238	ENST00000637903	C3	P01024	1663 aa		13.44	□□□□□ -0.26
SPTAN1-238	ENST00000637903	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.43	□□□□□ -0.26
SPTAN1-238	ENST00000637903	SAMD9L	Q8IVG5	1584 aa		13.41	□□□□□ -0.26
SPTAN1-238	ENST00000637903	CNTLN	Q9NXG0	1405 aa		13.4	□□□□□ -0.26
SPTAN1-238	ENST00000637903	ESF1	Q9H501	851 aa	Known RBP	13.4	□□□□□ -0.26
SPTAN1-238	ENST00000637903	PTPRT	O14522	1441 aa		13.39	□□□□□ -0.27
SPTAN1-238	ENST00000637903	KIAA1107	Q9UPP5	1409 aa		13.39	□□□□□ -0.27
SPTAN1-238	ENST00000637903	SPAG9	O60271	1321 aa	Known RBP	13.39	□□□□□ -0.27
SPTAN1-238	ENST00000637903	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
SPTAN1-238	ENST00000637903	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.38	□□□□□ -0.27
SPTAN1-238	ENST00000637903	SYCP2	Q9BX26	1530 aa		13.37	□□□□□ -0.27
SPTAN1-238	ENST00000637903	PLEKHH2	Q8IVE3	1493 aa		13.36	□□□□□ -0.27
SPTAN1-238	ENST00000637903	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.36	□□□□□ -0.27
SPTAN1-238	ENST00000637903	MROH2A	A6NES4	1674 aa		13.36	□□□□□ -0.27
SPTAN1-238	ENST00000637903	NPAT	Q14207	1427 aa		13.36	□□□□□ -0.27
SPTAN1-238	ENST00000637903	ZMYM3	Q14202	1370 aa		13.35	□□□□□ -0.27
SPTAN1-238	ENST00000637903	CCNB3	Q8WWL7	1395 aa		13.34	□□□□□ -0.27
SPTAN1-238	ENST00000637903	NCOA1	Q15788	1441 aa		13.34	□□□□□ -0.27
SPTAN1-238	ENST00000637903	ATP7A	Q04656	1500 aa		13.34	□□□□□ -0.27
SPTAN1-238	ENST00000637903	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.33	□□□□□ -0.27
SPTAN1-238	ENST00000637903	PLXNC1	O60486	1568 aa		13.33	□□□□□ -0.28
SPTAN1-238	ENST00000637903	INO80	Q9ULG1	1556 aa	Predicted RBP	13.33	□□□□□ -0.28
SPTAN1-238	ENST00000637903	MTUS2	Q5JR59	1369 aa		13.32	□□□□□ -0.28
SPTAN1-238	ENST00000637903	A2M	P01023	1474 aa		13.32	□□□□□ -0.28
SPTAN1-238	ENST00000637903	PPP6R1	Q9UPN7	881 aa		13.32	□□□□□ -0.28
SPTAN1-238	ENST00000637903	LTBP4	Q8N2S1	1624 aa		13.31	□□□□□ -0.28
SPTAN1-238	ENST00000637903	MBD5	Q9P267	1494 aa		13.29	□□□□□ -0.28
SPTAN1-238	ENST00000637903	CAMSAP1	Q5T5Y3	1602 aa		13.29	□□□□□ -0.28
SPTAN1-238	ENST00000637903	CLTC	Q00610	1675 aa	Known RBP	13.29	□□□□□ -0.28
SPTAN1-238	ENST00000637903	ZNF644	Q9H582	1327 aa	Predicted RBP	13.29	□□□□□ -0.28
SPTAN1-238	ENST00000637903	IQSEC2	Q5JU85	1478 aa		13.29	□□□□□ -0.28
SPTAN1-238	ENST00000637903	TIAM1	Q13009	1591 aa		13.28	□□□□□ -0.28
SPTAN1-238	ENST00000637903	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.28	□□□□□ -0.28
SPTAN1-238	ENST00000637903	PTPRK	Q15262	1439 aa		13.28	□□□□□ -0.28
SPTAN1-238	ENST00000637903	CEP162	Q5TB80	1403 aa		13.28	□□□□□ -0.28
SPTAN1-238	ENST00000637903	ADGB	Q8N7X0	1667 aa		13.28	□□□□□ -0.28
SPTAN1-238	ENST00000637903	GGT6	Q6P531	493 aa		13.27	□□□□□ -0.29
SPTAN1-238	ENST00000637903	EHBP1L1	Q8N3D4	1523 aa		13.27	□□□□□ -0.29
SPTAN1-238	ENST00000637903	ZNF142	P52746	1687 aa	Predicted RBP	13.26	□□□□□ -0.29
SPTAN1-238	ENST00000637903	PLA2R1	Q13018	1463 aa		13.25	□□□□□ -0.29
SPTAN1-238	ENST00000637903	DHX29	Q7Z478	1369 aa	Known RBP	13.25	□□□□□ -0.29
SPTAN1-238	ENST00000637903	NCKAP5L	Q9HCH0	1330 aa		13.25	□□□□□ -0.29
SPTAN1-238	ENST00000637903	PKD2	Q13563	968 aa		13.25	□□□□□ -0.29
SPTAN1-238	ENST00000637903	MYO3A	Q8NEV4	1616 aa		13.24	□□□□□ -0.29
SPTAN1-238	ENST00000637903	TCOF1	Q13428	1488 aa	Known RBP	13.23	□□□□□ -0.29
SPTAN1-238	ENST00000637903	RSPH4A	Q5TD94	716 aa		13.23	□□□□□ -0.29
SPTAN1-238	ENST00000637903	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.23	□□□□□ -0.29
SPTAN1-238	ENST00000637903	DISP3	Q9P2K9	1392 aa		13.2	□□□□□ -0.3
SPTAN1-238	ENST00000637903	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.2	□□□□□ -0.3
SPTAN1-238	ENST00000637903	LOC105371045	A0A1W2PR82	267 aa		13.2	□□□□□ -0.3
SPTAN1-238	ENST00000637903	A2ML1	A8K2U0	1454 aa		13.2	□□□□□ -0.3
SPTAN1-238	ENST00000637903	NCOA2	Q15596	1464 aa		13.19	□□□□□ -0.3
SPTAN1-238	ENST00000637903	CCDC141	Q6ZP82	1450 aa		13.19	□□□□□ -0.3
SPTAN1-238	ENST00000637903	ILDR2	Q71H61	639 aa		13.19	□□□□□ -0.3
SPTAN1-238	ENST00000637903	FAM135A	Q9P2D6	1515 aa		13.18	□□□□□ -0.3

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