RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
CHD2-229ENST00000637789 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
CHD2-229ENST00000637789 GOLGA3Q08378 1498 aa17.58■□□□□ 0.41
CHD2-229ENST00000637789 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
CHD2-229ENST00000637789 HECW1Q76N89 1606 aa17.56■□□□□ 0.4
CHD2-229ENST00000637789 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
CHD2-229ENST00000637789 ATP10AO60312 1499 aa17.52■□□□□ 0.4
CHD2-229ENST00000637789 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.39
CHD2-229ENST00000637789 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
CHD2-229ENST00000637789 C3P01024 1663 aa17.51■□□□□ 0.39
CHD2-229ENST00000637789 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
CHD2-229ENST00000637789 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
CHD2-229ENST00000637789 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
CHD2-229ENST00000637789 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
CHD2-229ENST00000637789 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
CHD2-229ENST00000637789 TOM1O60784 492 aa17.46■□□□□ 0.39
CHD2-229ENST00000637789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
CHD2-229ENST00000637789 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
CHD2-229ENST00000637789 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
CHD2-229ENST00000637789 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
CHD2-229ENST00000637789 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
CHD2-229ENST00000637789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHD2-229ENST00000637789 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
CHD2-229ENST00000637789 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
CHD2-229ENST00000637789 RAPGEF6Q8TEU7 1601 aa17.36■□□□□ 0.37
CHD2-229ENST00000637789 PKD2Q13563 968 aa17.35■□□□□ 0.37
CHD2-229ENST00000637789 POTEAQ6S8J7 498 aa17.34■□□□□ 0.37
CHD2-229ENST00000637789 ALKQ9UM73 1620 aa17.34■□□□□ 0.37
CHD2-229ENST00000637789 TCOF1Q13428 1488 aaKnown RBP17.33■□□□□ 0.37
CHD2-229ENST00000637789 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
CHD2-229ENST00000637789 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
CHD2-229ENST00000637789 PLA2R1Q13018 1463 aa17.32■□□□□ 0.36
CHD2-229ENST00000637789 CPS1P31327 1500 aa17.31■□□□□ 0.36
CHD2-229ENST00000637789 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
CHD2-229ENST00000637789 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
CHD2-229ENST00000637789 PLEKHD1A6NEE1 506 aa17.3■□□□□ 0.36
CHD2-229ENST00000637789 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
CHD2-229ENST00000637789 NPATQ14207 1427 aa17.29■□□□□ 0.36
CHD2-229ENST00000637789 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
CHD2-229ENST00000637789 DIP2CQ9Y2E4 1556 aa17.28■□□□□ 0.36
CHD2-229ENST00000637789 AGLP35573 1532 aa17.27■□□□□ 0.36
CHD2-229ENST00000637789 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
CHD2-229ENST00000637789 ZNF142P52746 1687 aaPredicted RBP17.26■□□□□ 0.35
CHD2-229ENST00000637789 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
CHD2-229ENST00000637789 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
CHD2-229ENST00000637789 PLCH2O75038 1416 aa17.24■□□□□ 0.35
CHD2-229ENST00000637789 MYO3AQ8NEV4 1616 aa17.22■□□□□ 0.35
CHD2-229ENST00000637789 ZNF518AQ6AHZ1 1483 aa17.22■□□□□ 0.35
CHD2-229ENST00000637789 KDM5CP41229 1560 aa17.22■□□□□ 0.35
CHD2-229ENST00000637789 CEP170BQ9Y4F5 1589 aaPredicted RBP17.22■□□□□ 0.35
CHD2-229ENST00000637789 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
CHD2-229ENST00000637789 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
CHD2-229ENST00000637789 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.34
CHD2-229ENST00000637789 AFAP1Q8N556 730 aa17.2■□□□□ 0.34
CHD2-229ENST00000637789 MROH2AA6NES4 1674 aa17.2■□□□□ 0.34
CHD2-229ENST00000637789 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHD2-229ENST00000637789 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
CHD2-229ENST00000637789 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
CHD2-229ENST00000637789 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
CHD2-229ENST00000637789 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
CHD2-229ENST00000637789 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
CHD2-229ENST00000637789 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
CHD2-229ENST00000637789 POLR1AO95602 1720 aaPredicted RBP17.11■□□□□ 0.33
CHD2-229ENST00000637789 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
CHD2-229ENST00000637789 DNMT1P26358 1616 aaKnown RBP17.08■□□□□ 0.32
CHD2-229ENST00000637789 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
CHD2-229ENST00000637789 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
CHD2-229ENST00000637789 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
CHD2-229ENST00000637789 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
CHD2-229ENST00000637789 LRRC7Q96NW7 1537 aa17.05■□□□□ 0.32
CHD2-229ENST00000637789 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
CHD2-229ENST00000637789 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
CHD2-229ENST00000637789 STRCP1A6NGW2 1772 aa17.01■□□□□ 0.31
CHD2-229ENST00000637789 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
CHD2-229ENST00000637789 SYNMO15061 1565 aa16.98■□□□□ 0.31
CHD2-229ENST00000637789 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
CHD2-229ENST00000637789 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
CHD2-229ENST00000637789 KIF14Q15058 1648 aa16.96■□□□□ 0.3
CHD2-229ENST00000637789 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
CHD2-229ENST00000637789 MED14O60244 1454 aa16.93■□□□□ 0.3
CHD2-229ENST00000637789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHD2-229ENST00000637789 RANGAP1P46060 587 aaPredicted RBP16.93■□□□□ 0.3
CHD2-229ENST00000637789 FAM135BQ49AJ0 1406 aa16.92■□□□□ 0.3
CHD2-229ENST00000637789 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
CHD2-229ENST00000637789 ABCC1P33527 1531 aa16.91■□□□□ 0.3
CHD2-229ENST00000637789 DEPDC5O75140 1603 aa16.9■□□□□ 0.3
CHD2-229ENST00000637789 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
CHD2-229ENST00000637789 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
CHD2-229ENST00000637789 GGT6Q6P531 493 aa16.87■□□□□ 0.29
CHD2-229ENST00000637789 TNRQ92752 1358 aa16.86■□□□□ 0.29
CHD2-229ENST00000637789 XIRP1Q702N8 1843 aaKnown RBP16.85■□□□□ 0.29
CHD2-229ENST00000637789 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
CHD2-229ENST00000637789 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
CHD2-229ENST00000637789 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
CHD2-229ENST00000637789 ROBO1Q9Y6N7 1651 aa16.84■□□□□ 0.29
CHD2-229ENST00000637789 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
CHD2-229ENST00000637789 ZNF772Q68DY9 489 aaPredicted RBP16.82■□□□□ 0.28
CHD2-229ENST00000637789 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
CHD2-229ENST00000637789 TROQ12816 1431 aaPredicted RBP16.8■□□□□ 0.28
CHD2-229ENST00000637789 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms