RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ARHGAP5Q13017 1502 aa24.84■■□□□ 1.57
CLN6-216ENST00000636876 FANCAO15360 1455 aa24.83■■□□□ 1.57
CLN6-216ENST00000636876 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.57
CLN6-216ENST00000636876 NEO1Q92859 1461 aa24.83■■□□□ 1.56
CLN6-216ENST00000636876 ITSN2Q9NZM3 1697 aa24.82■■□□□ 1.56
CLN6-216ENST00000636876 EFCAB2Q5VUJ9 269 aa24.82■■□□□ 1.56
CLN6-216ENST00000636876 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
CLN6-216ENST00000636876 PHLDB1Q86UU1 1377 aa24.8■■□□□ 1.56
CLN6-216ENST00000636876 CFDP1Q9UEE9 299 aaPredicted RBP24.79■■□□□ 1.56
CLN6-216ENST00000636876 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
CLN6-216ENST00000636876 AKNAQ7Z591 1439 aa24.78■■□□□ 1.56
CLN6-216ENST00000636876 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
CLN6-216ENST00000636876 ZNF777Q9ULD5 760 aaPredicted RBP24.72■■□□□ 1.55
CLN6-216ENST00000636876 SAMD9LQ8IVG5 1584 aa24.71■■□□□ 1.55
CLN6-216ENST00000636876 ADGRL1O94910 1474 aa24.71■■□□□ 1.55
CLN6-216ENST00000636876 KDM4FA0A1W2PPD8 638 aa24.71■■□□□ 1.55
CLN6-216ENST00000636876 COL17A1Q9UMD9 1497 aaPredicted RBP24.7■■□□□ 1.54
CLN6-216ENST00000636876 ABCC1P33527 1531 aa24.69■■□□□ 1.54
CLN6-216ENST00000636876 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
CLN6-216ENST00000636876 SCAPERQ9BY12 1400 aa24.69■■□□□ 1.54
CLN6-216ENST00000636876 PLEKHH2Q8IVE3 1493 aa24.68■■□□□ 1.54
CLN6-216ENST00000636876 ZNF644Q9H582 1327 aaPredicted RBP24.67■■□□□ 1.54
CLN6-216ENST00000636876 DENND4BO75064 1496 aaPredicted RBP24.66■■□□□ 1.54
CLN6-216ENST00000636876 CAMSAP2Q08AD1 1489 aa24.66■■□□□ 1.54
CLN6-216ENST00000636876 KIAA1107Q9UPP5 1409 aa24.65■■□□□ 1.54
CLN6-216ENST00000636876 ARHGEF12Q9NZN5 1544 aa24.65■■□□□ 1.54
CLN6-216ENST00000636876 SYCP2Q9BX26 1530 aa24.63■■□□□ 1.53
CLN6-216ENST00000636876 PTPN23Q9H3S7 1636 aa24.63■■□□□ 1.53
CLN6-216ENST00000636876 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
CLN6-216ENST00000636876 RAPGEF3O95398 923 aa24.61■■□□□ 1.53
CLN6-216ENST00000636876 TCOF1Q13428 1488 aaKnown RBP24.61■■□□□ 1.53
CLN6-216ENST00000636876 RICTORQ6R327 1708 aa24.61■■□□□ 1.53
CLN6-216ENST00000636876 FRMPD1Q5SYB0 1578 aa24.6■■□□□ 1.53
CLN6-216ENST00000636876 HNRNPMP52272 730 aaKnown RBP eCLIP24.6■■□□□ 1.53
CLN6-216ENST00000636876 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
CLN6-216ENST00000636876 MBD5Q9P267 1494 aa24.58■■□□□ 1.53
CLN6-216ENST00000636876 ZNF518AQ6AHZ1 1483 aa24.58■■□□□ 1.52
CLN6-216ENST00000636876 AFAP1Q8N556 730 aa24.55■■□□□ 1.52
CLN6-216ENST00000636876 ARHGEF5Q12774 1597 aa24.54■■□□□ 1.52
CLN6-216ENST00000636876 KDM5CP41229 1560 aa24.54■■□□□ 1.52
CLN6-216ENST00000636876 RRBP1Q9P2E9 1410 aaKnown RBP24.53■■□□□ 1.52
CLN6-216ENST00000636876 ZMYM4Q5VZL5 1548 aa24.53■■□□□ 1.52
CLN6-216ENST00000636876 CCDC141Q6ZP82 1450 aa24.52■■□□□ 1.52
CLN6-216ENST00000636876 FAM50AQ14320 339 aaKnown RBP24.52■■□□□ 1.52
CLN6-216ENST00000636876 RSPH4AQ5TD94 716 aa24.51■■□□□ 1.51
CLN6-216ENST00000636876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.49■■□□□ 1.51
CLN6-216ENST00000636876 DNMT1P26358 1616 aaKnown RBP24.46■■□□□ 1.51
CLN6-216ENST00000636876 HECW2Q9P2P5 1572 aa24.46■■□□□ 1.51
CLN6-216ENST00000636876 MAGI2Q86UL8 1455 aa24.46■■□□□ 1.51
CLN6-216ENST00000636876 MLH3Q9UHC1 1453 aa24.46■■□□□ 1.51
CLN6-216ENST00000636876 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
CLN6-216ENST00000636876 ABCC5O15440 1437 aa24.45■■□□□ 1.51
CLN6-216ENST00000636876 DAPK1P53355 1430 aa24.44■■□□□ 1.5
CLN6-216ENST00000636876 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
CLN6-216ENST00000636876 ZFYVE16Q7Z3T8 1539 aa24.42■■□□□ 1.5
CLN6-216ENST00000636876 TSPY4P0CV99 314 aa24.42■■□□□ 1.5
CLN6-216ENST00000636876 TSPY10P0CW01 314 aa24.42■■□□□ 1.5
CLN6-216ENST00000636876 YEATS2Q9ULM3 1422 aa24.42■■□□□ 1.5
CLN6-216ENST00000636876 ATP7AQ04656 1500 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 ARHGEF40Q8TER5 1519 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 CROCC2H7BZ55 1655 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 SHANK2Q9UPX8 1470 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 MYT1LQ9UL68 1186 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 RTEL1-TNFRSF6BF6WH68 1400 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 KIDINS220Q9ULH0 1771 aa24.41■■□□□ 1.5
CLN6-216ENST00000636876 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
CLN6-216ENST00000636876 MAST1Q9Y2H9 1570 aa24.4■■□□□ 1.5
CLN6-216ENST00000636876 ABCA6Q8N139 1617 aa24.36■■□□□ 1.49
CLN6-216ENST00000636876 DIP2CQ9Y2E4 1556 aa24.36■■□□□ 1.49
CLN6-216ENST00000636876 PTPRKQ15262 1439 aa24.34■■□□□ 1.49
CLN6-216ENST00000636876 ATP10AO60312 1499 aa24.32■■□□□ 1.48
CLN6-216ENST00000636876 ITGAEP38570 1179 aa24.32■■□□□ 1.48
CLN6-216ENST00000636876 CHIC2Q9UKJ5 165 aa24.32■■□□□ 1.48
CLN6-216ENST00000636876 PLXNC1O60486 1568 aa24.3■■□□□ 1.48
CLN6-216ENST00000636876 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
CLN6-216ENST00000636876 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
CLN6-216ENST00000636876 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
CLN6-216ENST00000636876 REREQ9P2R6 1566 aa24.28■■□□□ 1.48
CLN6-216ENST00000636876 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
CLN6-216ENST00000636876 A2MP01023 1474 aa24.26■■□□□ 1.47
CLN6-216ENST00000636876 ROCK1Q13464 1354 aa24.25■■□□□ 1.47
CLN6-216ENST00000636876 KIF15Q9NS87 1388 aa24.25■■□□□ 1.47
CLN6-216ENST00000636876 RRP7BPQ9NSQ0 103 aa24.23■■□□□ 1.47
CLN6-216ENST00000636876 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
CLN6-216ENST00000636876 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
CLN6-216ENST00000636876 AGLP35573 1532 aa24.2■■□□□ 1.47
CLN6-216ENST00000636876 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.47
CLN6-216ENST00000636876 ARID4BQ4LE39 1312 aaPredicted RBP24.17■■□□□ 1.46
CLN6-216ENST00000636876 ADAMTSL3P82987 1691 aa24.16■■□□□ 1.46
CLN6-216ENST00000636876 ERBINQ96RT1 1412 aa24.14■■□□□ 1.45
CLN6-216ENST00000636876 EIF2AK4Q9P2K8 1649 aaKnown RBP24.12■■□□□ 1.45
CLN6-216ENST00000636876 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
CLN6-216ENST00000636876 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
CLN6-216ENST00000636876 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
CLN6-216ENST00000636876 HFM1A2PYH4 1435 aa24.1■■□□□ 1.45
CLN6-216ENST00000636876 NAIPQ13075 1403 aa24.1■■□□□ 1.45
CLN6-216ENST00000636876 KIF3BO15066 747 aa24.1■■□□□ 1.45
CLN6-216ENST00000636876 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.45
CLN6-216ENST00000636876 ILDR1Q86SU0 546 aaPredicted RBP24.08■■□□□ 1.45
CLN6-216ENST00000636876 MLECQ14165 292 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms