RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 ADCY10Q96PN6 1610 aa14.97□□□□□ -0.01
CHD2-223ENST00000636306 MAPKBP1O60336 1514 aa14.97□□□□□ -0.01
CHD2-223ENST00000636306 CHD1O14646 1710 aa14.94□□□□□ -0.02
CHD2-223ENST00000636306 TROQ12816 1431 aaPredicted RBP14.92□□□□□ -0.02
CHD2-223ENST00000636306 FBLN2P98095 1184 aa14.91□□□□□ -0.02
CHD2-223ENST00000636306 ABCA8O94911 1581 aa14.91□□□□□ -0.02
CHD2-223ENST00000636306 TIMELESSQ9UNS1 1208 aa14.9□□□□□ -0.02
CHD2-223ENST00000636306 UACAQ9BZF9 1416 aa14.9□□□□□ -0.02
CHD2-223ENST00000636306 DNMT1P26358 1616 aaKnown RBP14.9□□□□□ -0.02
CHD2-223ENST00000636306 NAIPQ13075 1403 aa14.88□□□□□ -0.03
CHD2-223ENST00000636306 JPH4Q96JJ6 628 aa14.88□□□□□ -0.03
CHD2-223ENST00000636306 KIF14Q15058 1648 aa14.88□□□□□ -0.03
CHD2-223ENST00000636306 SHROOM2Q13796 1616 aa14.87□□□□□ -0.03
CHD2-223ENST00000636306 CCER2I3L3R5 266 aa14.87□□□□□ -0.03
CHD2-223ENST00000636306 NOP58Q9Y2X3 529 aaKnown RBP14.87□□□□□ -0.03
CHD2-223ENST00000636306 ADGBQ8N7X0 1667 aa14.86□□□□□ -0.03
CHD2-223ENST00000636306 PLB1Q6P1J6 1458 aa14.86□□□□□ -0.03
CHD2-223ENST00000636306 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
CHD2-223ENST00000636306 ROCK1Q13464 1354 aa14.84□□□□□ -0.03
CHD2-223ENST00000636306 CROCC2H7BZ55 1655 aa14.83□□□□□ -0.03
CHD2-223ENST00000636306 DAPK1P53355 1430 aa14.82□□□□□ -0.04
CHD2-223ENST00000636306 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
CHD2-223ENST00000636306 PRG4Q92954 1404 aaPredicted RBP14.81□□□□□ -0.04
CHD2-223ENST00000636306 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
CHD2-223ENST00000636306 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
CHD2-223ENST00000636306 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
CHD2-223ENST00000636306 CAMSAP2Q08AD1 1489 aa14.8□□□□□ -0.04
CHD2-223ENST00000636306 PTPRGP23470 1445 aa14.78□□□□□ -0.04
CHD2-223ENST00000636306 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
CHD2-223ENST00000636306 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
CHD2-223ENST00000636306 C11orf95C9JLR9 678 aaPredicted RBP14.76□□□□□ -0.05
CHD2-223ENST00000636306 GPATCH8Q9UKJ3 1502 aaKnown RBP14.76□□□□□ -0.05
CHD2-223ENST00000636306 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
CHD2-223ENST00000636306 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
CHD2-223ENST00000636306 TONSLQ96HA7 1378 aa14.75□□□□□ -0.05
CHD2-223ENST00000636306 ATP10BO94823 1461 aa14.75□□□□□ -0.05
CHD2-223ENST00000636306 SHANK2Q9UPX8 1470 aa14.75□□□□□ -0.05
CHD2-223ENST00000636306 ADGRL2O95490 1459 aa14.74□□□□□ -0.05
CHD2-223ENST00000636306 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
CHD2-223ENST00000636306 ABCC5O15440 1437 aa14.74□□□□□ -0.05
CHD2-223ENST00000636306 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
CHD2-223ENST00000636306 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
CHD2-223ENST00000636306 PKNOX2Q96KN3 472 aa14.73□□□□□ -0.05
CHD2-223ENST00000636306 PREX2Q70Z35 1606 aa14.72□□□□□ -0.05
CHD2-223ENST00000636306 ABCC2Q92887 1545 aa14.72□□□□□ -0.05
CHD2-223ENST00000636306 CFDP1Q9UEE9 299 aaPredicted RBP14.72□□□□□ -0.05
CHD2-223ENST00000636306 WASHC2AQ641Q2 1341 aa14.72□□□□□ -0.05
CHD2-223ENST00000636306 ARHGEF5Q12774 1597 aa14.71□□□□□ -0.06
CHD2-223ENST00000636306 NBR1Q14596 966 aa14.7□□□□□ -0.06
CHD2-223ENST00000636306 KDM6BO15054 1643 aa14.69□□□□□ -0.06
CHD2-223ENST00000636306 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
CHD2-223ENST00000636306 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
CHD2-223ENST00000636306 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.68□□□□□ -0.06
CHD2-223ENST00000636306 ANKRD30AQ9BXX3 1397 aa14.67□□□□□ -0.06
CHD2-223ENST00000636306 PPP1R15AO75807 674 aaPredicted RBP14.67□□□□□ -0.06
CHD2-223ENST00000636306 USP35Q9P2H5 1018 aa14.67□□□□□ -0.06
CHD2-223ENST00000636306 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
CHD2-223ENST00000636306 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
CHD2-223ENST00000636306 UHRF1BP1LA0JNW5 1464 aa14.65□□□□□ -0.06
CHD2-223ENST00000636306 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
CHD2-223ENST00000636306 WASHC2CQ9Y4E1 1318 aa14.65□□□□□ -0.06
CHD2-223ENST00000636306 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
CHD2-223ENST00000636306 ANP32CO43423 234 aa14.64□□□□□ -0.07
CHD2-223ENST00000636306 IPO9Q96P70 1041 aaKnown RBP14.64□□□□□ -0.07
CHD2-223ENST00000636306 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
CHD2-223ENST00000636306 PLEKHH2Q8IVE3 1493 aa14.63□□□□□ -0.07
CHD2-223ENST00000636306 CDC42BPBQ9Y5S2 1711 aa14.63□□□□□ -0.07
CHD2-223ENST00000636306 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
CHD2-223ENST00000636306 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
CHD2-223ENST00000636306 ANP32AP39687 249 aaKnown RBP14.61□□□□□ -0.07
CHD2-223ENST00000636306 CCDC141Q6ZP82 1450 aa14.61□□□□□ -0.07
CHD2-223ENST00000636306 ZCCHC11Q5TAX3 1644 aaKnown RBP14.61□□□□□ -0.07
CHD2-223ENST00000636306 MAST1Q9Y2H9 1570 aa14.61□□□□□ -0.07
CHD2-223ENST00000636306 ZNF644Q9H582 1327 aaPredicted RBP14.61□□□□□ -0.07
CHD2-223ENST00000636306 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
CHD2-223ENST00000636306 ZBTB47Q9UFB7 747 aaPredicted RBP14.6□□□□□ -0.07
CHD2-223ENST00000636306 SAMD9LQ8IVG5 1584 aa14.6□□□□□ -0.07
CHD2-223ENST00000636306 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
CHD2-223ENST00000636306 MPHOSPH9Q99550 1183 aa14.6□□□□□ -0.07
CHD2-223ENST00000636306 RSPH6AQ9H0K4 717 aa14.6□□□□□ -0.07
CHD2-223ENST00000636306 KDM5DQ9BY66 1539 aa14.59□□□□□ -0.07
CHD2-223ENST00000636306 DENND4BO75064 1496 aaPredicted RBP14.59□□□□□ -0.07
CHD2-223ENST00000636306 TTC37Q6PGP7 1564 aa14.59□□□□□ -0.07
CHD2-223ENST00000636306 RTN4Q9NQC3 1192 aaKnown RBP14.59□□□□□ -0.07
CHD2-223ENST00000636306 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
CHD2-223ENST00000636306 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.07
CHD2-223ENST00000636306 GLIPR1L2Q4G1C9 344 aa14.58□□□□□ -0.08
CHD2-223ENST00000636306 ARHGAP5Q13017 1502 aa14.58□□□□□ -0.08
CHD2-223ENST00000636306 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
CHD2-223ENST00000636306 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
CHD2-223ENST00000636306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHD2-223ENST00000636306 KDM5BQ9UGL1 1544 aa14.57□□□□□ -0.08
CHD2-223ENST00000636306 ANKRD50Q9ULJ7 1429 aa14.56□□□□□ -0.08
CHD2-223ENST00000636306 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
CHD2-223ENST00000636306 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
CHD2-223ENST00000636306 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
CHD2-223ENST00000636306 PZPP20742 1482 aa14.55□□□□□ -0.08
CHD2-223ENST00000636306 ARAP3Q8WWN8 1544 aa14.55□□□□□ -0.08
CHD2-223ENST00000636306 KIAA1107Q9UPP5 1409 aa14.54□□□□□ -0.08
CHD2-223ENST00000636306 ANKRD30BQ9BXX2 1392 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms