RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 HECW1Q76N89 1606 aa31.06■■■□□ 2.56
CLN6-212ENST00000636020 ARHGEF12Q9NZN5 1544 aa31.04■■■□□ 2.56
CLN6-212ENST00000636020 PREX1Q8TCU6 1659 aa31.03■■■□□ 2.56
CLN6-212ENST00000636020 CEBPAP49715 358 aaPredicted RBP31.02■■■□□ 2.56
CLN6-212ENST00000636020 STRCQ7RTU9 1775 aa31.01■■■□□ 2.55
CLN6-212ENST00000636020 SCAPERQ9BY12 1400 aa30.99■■■□□ 2.55
CLN6-212ENST00000636020 SPATA31D1Q6ZQQ2 1576 aa30.98■■■□□ 2.55
CLN6-212ENST00000636020 ATP10AO60312 1499 aa30.98■■■□□ 2.55
CLN6-212ENST00000636020 C9orf84Q5VXU9 1444 aa30.94■■■□□ 2.54
CLN6-212ENST00000636020 CSRNP3Q8WYN3 585 aa30.94■■■□□ 2.54
CLN6-212ENST00000636020 RANGAP1P46060 587 aaPredicted RBP30.92■■■□□ 2.54
CLN6-212ENST00000636020 PLCH2O75038 1416 aa30.91■■■□□ 2.54
CLN6-212ENST00000636020 UHRF1BP1Q6BDS2 1440 aa30.9■■■□□ 2.54
CLN6-212ENST00000636020 SETD1BQ9UPS6 1966 aaKnown RBP30.9■■■□□ 2.54
CLN6-212ENST00000636020 PTPRTO14522 1441 aa30.88■■■□□ 2.53
CLN6-212ENST00000636020 EFCAB2Q5VUJ9 269 aa30.81■■■□□ 2.52
CLN6-212ENST00000636020 LTBP4Q8N2S1 1624 aa30.8■■■□□ 2.52
CLN6-212ENST00000636020 CDK13Q14004 1512 aaKnown RBP30.79■■■□□ 2.52
CLN6-212ENST00000636020 IQSEC2Q5JU85 1478 aa30.76■■■□□ 2.51
CLN6-212ENST00000636020 ZNF518AQ6AHZ1 1483 aa30.73■■■□□ 2.51
CLN6-212ENST00000636020 AFAP1Q8N556 730 aa30.72■■■□□ 2.51
CLN6-212ENST00000636020 MYO5CQ9NQX4 1742 aa30.68■■■□□ 2.5
CLN6-212ENST00000636020 KDM5CP41229 1560 aa30.68■■■□□ 2.5
CLN6-212ENST00000636020 C3P01024 1663 aa30.68■■■□□ 2.5
CLN6-212ENST00000636020 TRAPPC8Q9Y2L5 1435 aa30.66■■■□□ 2.5
CLN6-212ENST00000636020 REREQ9P2R6 1566 aa30.65■■■□□ 2.5
CLN6-212ENST00000636020 DIP2CQ9Y2E4 1556 aa30.65■■■□□ 2.5
CLN6-212ENST00000636020 NCOA1Q15788 1441 aa30.64■■■□□ 2.5
CLN6-212ENST00000636020 MYT1LQ9UL68 1186 aa30.63■■■□□ 2.49
CLN6-212ENST00000636020 ESF1Q9H501 851 aaKnown RBP30.6■■■□□ 2.49
CLN6-212ENST00000636020 EEA1Q15075 1411 aa30.58■■■□□ 2.49
CLN6-212ENST00000636020 CDK11AQ9UQ88 783 aaPredicted RBP30.58■■■□□ 2.49
CLN6-212ENST00000636020 AGLP35573 1532 aa30.57■■■□□ 2.49
CLN6-212ENST00000636020 MLH3Q9UHC1 1453 aa30.57■■■□□ 2.48
CLN6-212ENST00000636020 ARHGAP5Q13017 1502 aa30.57■■■□□ 2.48
CLN6-212ENST00000636020 KIF14Q15058 1648 aa30.56■■■□□ 2.48
CLN6-212ENST00000636020 ATP1B4Q9UN42 357 aaPredicted RBP30.56■■■□□ 2.48
CLN6-212ENST00000636020 ABCA6Q8N139 1617 aa30.55■■■□□ 2.48
CLN6-212ENST00000636020 UBAP1LF5GYI3 381 aa30.53■■■□□ 2.48
CLN6-212ENST00000636020 TROQ12816 1431 aaPredicted RBP30.5■■■□□ 2.47
CLN6-212ENST00000636020 CNTLNQ9NXG0 1405 aa30.5■■■□□ 2.47
CLN6-212ENST00000636020 CAMSAP1Q5T5Y3 1602 aa30.5■■■□□ 2.47
CLN6-212ENST00000636020 ZNF335Q9H4Z2 1342 aaPredicted RBP30.48■■■□□ 2.47
CLN6-212ENST00000636020 FMN1Q68DA7 1419 aa30.47■■■□□ 2.47
CLN6-212ENST00000636020 NCKAP5LQ9HCH0 1330 aa30.47■■■□□ 2.47
CLN6-212ENST00000636020 NPATQ14207 1427 aa30.46■■■□□ 2.47
CLN6-212ENST00000636020 CLIP1P30622 1438 aa30.42■■■□□ 2.46
CLN6-212ENST00000636020 CDC42BPBQ9Y5S2 1711 aa30.42■■■□□ 2.46
CLN6-212ENST00000636020 ZMYM3Q14202 1370 aa30.39■■■□□ 2.45
CLN6-212ENST00000636020 ABCC1P33527 1531 aa30.37■■■□□ 2.45
CLN6-212ENST00000636020 KIDINS220Q9ULH0 1771 aa30.37■■■□□ 2.45
CLN6-212ENST00000636020 PKD2Q13563 968 aa30.36■■■□□ 2.45
CLN6-212ENST00000636020 MROH2AA6NES4 1674 aa30.36■■■□□ 2.45
CLN6-212ENST00000636020 PLA2R1Q13018 1463 aa30.33■■■□□ 2.45
CLN6-212ENST00000636020 ARHGAP35Q9NRY4 1499 aa30.33■■■□□ 2.45
CLN6-212ENST00000636020 ITSN2Q9NZM3 1697 aa30.33■■■□□ 2.45
CLN6-212ENST00000636020 PREX2Q70Z35 1606 aa30.3■■■□□ 2.44
CLN6-212ENST00000636020 TCOF1Q13428 1488 aaKnown RBP30.3■■■□□ 2.44
CLN6-212ENST00000636020 HSPA1LP34931 641 aa30.28■■■□□ 2.44
CLN6-212ENST00000636020 MED1Q15648 1581 aaPredicted RBP30.27■■■□□ 2.44
CLN6-212ENST00000636020 LRRIQ1Q96JM4 1722 aa30.26■■■□□ 2.43
CLN6-212ENST00000636020 UBTFP17480 764 aaKnown RBP30.25■■■□□ 2.43
CLN6-212ENST00000636020 ZNF142P52746 1687 aaPredicted RBP30.25■■■□□ 2.43
CLN6-212ENST00000636020 PPP6R1Q9UPN7 881 aa30.24■■■□□ 2.43
CLN6-212ENST00000636020 MYO3AQ8NEV4 1616 aa30.22■■■□□ 2.43
CLN6-212ENST00000636020 SAMD9LQ8IVG5 1584 aa30.22■■■□□ 2.43
CLN6-212ENST00000636020 CEP170BQ9Y4F5 1589 aaPredicted RBP30.22■■■□□ 2.43
CLN6-212ENST00000636020 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
CLN6-212ENST00000636020 EHMT2Q96KQ7 1210 aa30.19■■■□□ 2.42
CLN6-212ENST00000636020 SCAF1Q9H7N4 1312 aaKnown RBP30.19■■■□□ 2.42
CLN6-212ENST00000636020 PIP4K2BP78356 416 aa30.18■■■□□ 2.42
CLN6-212ENST00000636020 SPAG9O60271 1321 aaKnown RBP30.18■■■□□ 2.42
CLN6-212ENST00000636020 CLTCQ00610 1675 aaKnown RBP30.17■■■□□ 2.42
CLN6-212ENST00000636020 SUPT6HQ7KZ85 1726 aaKnown RBP30.17■■■□□ 2.42
CLN6-212ENST00000636020 TOM1O60784 492 aa30.16■■■□□ 2.42
CLN6-212ENST00000636020 CDC42BPAQ5VT25 1732 aa30.15■■■□□ 2.42
CLN6-212ENST00000636020 ZNF777Q9ULD5 760 aaPredicted RBP30.13■■■□□ 2.41
CLN6-212ENST00000636020 HNRNPMP52272 730 aaKnown RBP eCLIP30.11■■■□□ 2.41
CLN6-212ENST00000636020 GGT6Q6P531 493 aa30.1■■■□□ 2.41
CLN6-212ENST00000636020 PLXNC1O60486 1568 aa30.1■■■□□ 2.41
CLN6-212ENST00000636020 CCDC18Q5T9S5 1454 aa30.09■■■□□ 2.41
CLN6-212ENST00000636020 SYCP2Q9BX26 1530 aa30.09■■■□□ 2.41
CLN6-212ENST00000636020 A2MP01023 1474 aa30.08■■■□□ 2.41
CLN6-212ENST00000636020 CPS1P31327 1500 aa30.07■■■□□ 2.4
CLN6-212ENST00000636020 A2ML1A8K2U0 1454 aa30.07■■■□□ 2.4
CLN6-212ENST00000636020 ATP7AQ04656 1500 aa30.06■■■□□ 2.4
CLN6-212ENST00000636020 CASKIN1Q8WXD9 1431 aa30.05■■■□□ 2.4
CLN6-212ENST00000636020 PHF23Q9BUL5 403 aaPredicted RBP30.05■■■□□ 2.4
CLN6-212ENST00000636020 SHANK2Q9UPX8 1470 aa30.05■■■□□ 2.4
CLN6-212ENST00000636020 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
CLN6-212ENST00000636020 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
CLN6-212ENST00000636020 KIAA1107Q9UPP5 1409 aa30.02■■■□□ 2.4
CLN6-212ENST00000636020 INO80Q9ULG1 1556 aaPredicted RBP30.01■■■□□ 2.39
CLN6-212ENST00000636020 NEURL4Q96JN8 1562 aa29.99■■■□□ 2.39
CLN6-212ENST00000636020 PLEKHH2Q8IVE3 1493 aa29.95■■■□□ 2.39
CLN6-212ENST00000636020 POLR1AO95602 1720 aaPredicted RBP29.95■■■□□ 2.38
CLN6-212ENST00000636020 ALKQ9UM73 1620 aa29.94■■■□□ 2.38
CLN6-212ENST00000636020 CFDP1Q9UEE9 299 aaPredicted RBP29.92■■■□□ 2.38
CLN6-212ENST00000636020 TNRQ92752 1358 aa29.9■■■□□ 2.38
CLN6-212ENST00000636020 VWDEQ8N2E2 1590 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms