RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	DNMT1	P26358	1616 aa	Known RBP	18.59	■□□□□ 0.57
PATJ-215	ENST00000635137	ACIN1	Q9UKV3	1341 aa	Known RBP	18.58	■□□□□ 0.57
PATJ-215	ENST00000635137	RSPH4A	Q5TD94	716 aa		18.58	■□□□□ 0.56
PATJ-215	ENST00000635137	HFM1	A2PYH4	1435 aa		18.57	■□□□□ 0.56
PATJ-215	ENST00000635137	DAPK1	P53355	1430 aa		18.57	■□□□□ 0.56
PATJ-215	ENST00000635137	RAB3GAP2	Q9H2M9	1393 aa		18.57	■□□□□ 0.56
PATJ-215	ENST00000635137	CDC42BPB	Q9Y5S2	1711 aa		18.57	■□□□□ 0.56
PATJ-215	ENST00000635137	ASXL2	Q76L83	1435 aa		18.56	■□□□□ 0.56
PATJ-215	ENST00000635137	AKNA	Q7Z591	1439 aa		18.56	■□□□□ 0.56
PATJ-215	ENST00000635137	ZNF644	Q9H582	1327 aa	Predicted RBP	18.56	■□□□□ 0.56
PATJ-215	ENST00000635137	TTC37	Q6PGP7	1564 aa		18.56	■□□□□ 0.56
PATJ-215	ENST00000635137	PTPRK	Q15262	1439 aa		18.56	■□□□□ 0.56
PATJ-215	ENST00000635137	CYB5RL	Q6IPT4	315 aa		18.56	■□□□□ 0.56
PATJ-215	ENST00000635137	CLSPN	Q9HAW4	1339 aa		18.55	■□□□□ 0.56
PATJ-215	ENST00000635137	PLCH2	O75038	1416 aa		18.54	■□□□□ 0.56
PATJ-215	ENST00000635137	ROCK1	Q13464	1354 aa		18.54	■□□□□ 0.56
PATJ-215	ENST00000635137	ARHGAP5	Q13017	1502 aa		18.54	■□□□□ 0.56
PATJ-215	ENST00000635137	PLEKHH2	Q8IVE3	1493 aa		18.54	■□□□□ 0.56
PATJ-215	ENST00000635137	ABCC5	O15440	1437 aa		18.54	■□□□□ 0.56
PATJ-215	ENST00000635137	EFCAB2	Q5VUJ9	269 aa		18.53	■□□□□ 0.56
PATJ-215	ENST00000635137	ARAP3	Q8WWN8	1544 aa		18.53	■□□□□ 0.56
PATJ-215	ENST00000635137	CHIC2	Q9UKJ5	165 aa		18.51	■□□□□ 0.55
PATJ-215	ENST00000635137	TSPY4	P0CV99	314 aa		18.51	■□□□□ 0.55
PATJ-215	ENST00000635137	TSPY10	P0CW01	314 aa		18.51	■□□□□ 0.55
PATJ-215	ENST00000635137	ABCA9	Q8IUA7	1624 aa		18.5	■□□□□ 0.55
PATJ-215	ENST00000635137	NAIP	Q13075	1403 aa		18.5	■□□□□ 0.55
PATJ-215	ENST00000635137	ARHGEF5	Q12774	1597 aa		18.5	■□□□□ 0.55
PATJ-215	ENST00000635137	KIAA1107	Q9UPP5	1409 aa		18.49	■□□□□ 0.55
PATJ-215	ENST00000635137	GCC2	Q8IWJ2	1684 aa		18.48	■□□□□ 0.55
PATJ-215	ENST00000635137	DHX57	Q6P158	1386 aa	Known RBP	18.48	■□□□□ 0.55
PATJ-215	ENST00000635137	SAMD9L	Q8IVG5	1584 aa		18.48	■□□□□ 0.55
PATJ-215	ENST00000635137	SHANK2	Q9UPX8	1470 aa		18.48	■□□□□ 0.55
PATJ-215	ENST00000635137	CROCC2	H7BZ55	1655 aa		18.48	■□□□□ 0.55
PATJ-215	ENST00000635137	ADGB	Q8N7X0	1667 aa		18.47	■□□□□ 0.55
PATJ-215	ENST00000635137	RRP7BP	Q9NSQ0	103 aa		18.47	■□□□□ 0.55
PATJ-215	ENST00000635137	MAPKBP1	O60336	1514 aa		18.46	■□□□□ 0.55
PATJ-215	ENST00000635137	ANKRD30A	Q9BXX3	1397 aa		18.46	■□□□□ 0.55
PATJ-215	ENST00000635137	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.45	■□□□□ 0.54
PATJ-215	ENST00000635137	ADGRL2	O95490	1459 aa		18.45	■□□□□ 0.54
PATJ-215	ENST00000635137	CCDC141	Q6ZP82	1450 aa		18.44	■□□□□ 0.54
PATJ-215	ENST00000635137	MBD5	Q9P267	1494 aa		18.44	■□□□□ 0.54
PATJ-215	ENST00000635137	NCOA1	Q15788	1441 aa		18.43	■□□□□ 0.54
PATJ-215	ENST00000635137	C9orf84	Q5VXU9	1444 aa		18.41	■□□□□ 0.54
PATJ-215	ENST00000635137	SYCP2	Q9BX26	1530 aa		18.4	■□□□□ 0.54
PATJ-215	ENST00000635137	FANCA	O15360	1455 aa		18.39	■□□□□ 0.54
PATJ-215	ENST00000635137	CD109	Q6YHK3	1445 aa		18.38	■□□□□ 0.53
PATJ-215	ENST00000635137	ABCC1	P33527	1531 aa		18.37	■□□□□ 0.53
PATJ-215	ENST00000635137	CFAP74	Q9C0B2	1584 aa		18.37	■□□□□ 0.53
PATJ-215	ENST00000635137	MAST1	Q9Y2H9	1570 aa		18.37	■□□□□ 0.53
PATJ-215	ENST00000635137	TRIM52	Q96A61	297 aa		18.34	■□□□□ 0.53
PATJ-215	ENST00000635137	GLI2	P10070	1586 aa		18.33	■□□□□ 0.53
PATJ-215	ENST00000635137	ANKRD50	Q9ULJ7	1429 aa		18.32	■□□□□ 0.52
PATJ-215	ENST00000635137	ADGRL1	O94910	1474 aa		18.31	■□□□□ 0.52
PATJ-215	ENST00000635137	ARHGEF12	Q9NZN5	1544 aa		18.31	■□□□□ 0.52
PATJ-215	ENST00000635137	KIF15	Q9NS87	1388 aa		18.31	■□□□□ 0.52
PATJ-215	ENST00000635137	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.3	■□□□□ 0.52
PATJ-215	ENST00000635137	PLXNC1	O60486	1568 aa		18.29	■□□□□ 0.52
PATJ-215	ENST00000635137	SCAPER	Q9BY12	1400 aa		18.29	■□□□□ 0.52
PATJ-215	ENST00000635137	NEO1	Q92859	1461 aa		18.28	■□□□□ 0.52
PATJ-215	ENST00000635137	SPAG9	O60271	1321 aa	Known RBP	18.28	■□□□□ 0.52
PATJ-215	ENST00000635137	KDM6B	O15054	1643 aa		18.28	■□□□□ 0.52
PATJ-215	ENST00000635137	TRAPPC8	Q9Y2L5	1435 aa		18.27	■□□□□ 0.52
PATJ-215	ENST00000635137	MAP3K4	Q9Y6R4	1608 aa		18.27	■□□□□ 0.52
PATJ-215	ENST00000635137	FAM69C	Q0P6D2	419 aa		18.25	■□□□□ 0.51
PATJ-215	ENST00000635137	MPHOSPH9	Q99550	1183 aa		18.25	■□□□□ 0.51
PATJ-215	ENST00000635137	TIMELESS	Q9UNS1	1208 aa		18.25	■□□□□ 0.51
PATJ-215	ENST00000635137	AFAP1	Q8N556	730 aa		18.24	■□□□□ 0.51
PATJ-215	ENST00000635137	DUOX2	Q9NRD8	1548 aa		18.24	■□□□□ 0.51
PATJ-215	ENST00000635137	ZNF518A	Q6AHZ1	1483 aa		18.24	■□□□□ 0.51
PATJ-215	ENST00000635137	DIP2B	Q9P265	1576 aa		18.24	■□□□□ 0.51
PATJ-215	ENST00000635137	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.21	■□□□□ 0.51
PATJ-215	ENST00000635137	ERBIN	Q96RT1	1412 aa		18.2	■□□□□ 0.5
PATJ-215	ENST00000635137	MYT1L	Q9UL68	1186 aa		18.2	■□□□□ 0.5
PATJ-215	ENST00000635137	ATP7A	Q04656	1500 aa		18.19	■□□□□ 0.5
PATJ-215	ENST00000635137	ZFYVE16	Q7Z3T8	1539 aa		18.19	■□□□□ 0.5
PATJ-215	ENST00000635137	DNAJC5	Q9H3Z4	198 aa		18.19	■□□□□ 0.5
PATJ-215	ENST00000635137	TEX14	Q8IWB6	1497 aa		18.19	■□□□□ 0.5
PATJ-215	ENST00000635137	INO80	Q9ULG1	1556 aa	Predicted RBP	18.18	■□□□□ 0.5
PATJ-215	ENST00000635137	NUP155	O75694	1391 aa		18.17	■□□□□ 0.5
PATJ-215	ENST00000635137	POGZ	Q7Z3K3	1410 aa		18.17	■□□□□ 0.5
PATJ-215	ENST00000635137	DENND4B	O75064	1496 aa	Predicted RBP	18.17	■□□□□ 0.5
PATJ-215	ENST00000635137	PELP1	Q8IZL8	1130 aa	Known RBP	18.16	■□□□□ 0.5
PATJ-215	ENST00000635137	KDM5D	Q9BY66	1539 aa		18.16	■□□□□ 0.5
PATJ-215	ENST00000635137	SCAF1	Q9H7N4	1312 aa	Known RBP	18.16	■□□□□ 0.5
PATJ-215	ENST00000635137	KDM5C	P41229	1560 aa		18.15	■□□□□ 0.5
PATJ-215	ENST00000635137	MLH3	Q9UHC1	1453 aa		18.14	■□□□□ 0.49
PATJ-215	ENST00000635137	NEUROD1	Q13562	356 aa		18.14	■□□□□ 0.49
PATJ-215	ENST00000635137	PZP	P20742	1482 aa		18.14	■□□□□ 0.49
PATJ-215	ENST00000635137	SIN3A	Q96ST3	1273 aa		18.13	■□□□□ 0.49
PATJ-215	ENST00000635137	UNC13B	O14795	1591 aa		18.12	■□□□□ 0.49
PATJ-215	ENST00000635137	KIF13A	Q9H1H9	1805 aa		18.11	■□□□□ 0.49
PATJ-215	ENST00000635137	DHX29	Q7Z478	1369 aa	Known RBP	18.11	■□□□□ 0.49
PATJ-215	ENST00000635137	TSPOAP1	O95153	1857 aa		18.11	■□□□□ 0.49
PATJ-215	ENST00000635137	KIDINS220	Q9ULH0	1771 aa		18.11	■□□□□ 0.49
PATJ-215	ENST00000635137	HECW2	Q9P2P5	1572 aa		18.11	■□□□□ 0.49
PATJ-215	ENST00000635137	PKD2	Q13563	968 aa		18.09	■□□□□ 0.49
PATJ-215	ENST00000635137	TONSL	Q96HA7	1378 aa		18.09	■□□□□ 0.49
PATJ-215	ENST00000635137	ANKRD30B	Q9BXX2	1392 aa		18.09	■□□□□ 0.49
PATJ-215	ENST00000635137	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.09	■□□□□ 0.49
PATJ-215	ENST00000635137	PPRC1	Q5VV67	1664 aa	Known RBP	18.08	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms