RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 EPRSP07814 1512 aaKnown RBP10.5□□□□□ -0.73
BRCA1-230ENST00000634433 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
BRCA1-230ENST00000634433 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-230ENST00000634433 NCOA2Q15596 1464 aa10.48□□□□□ -0.73
BRCA1-230ENST00000634433 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
BRCA1-230ENST00000634433 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
BRCA1-230ENST00000634433 LRRIQ1Q96JM4 1722 aa10.47□□□□□ -0.73
BRCA1-230ENST00000634433 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
BRCA1-230ENST00000634433 RAB3GAP2Q9H2M9 1393 aa10.46□□□□□ -0.73
BRCA1-230ENST00000634433 FKBP8Q14318 412 aa10.46□□□□□ -0.73
BRCA1-230ENST00000634433 KDM6BO15054 1643 aa10.46□□□□□ -0.74
BRCA1-230ENST00000634433 RAPGEF6Q8TEU7 1601 aa10.44□□□□□ -0.74
BRCA1-230ENST00000634433 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
BRCA1-230ENST00000634433 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-230ENST00000634433 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
BRCA1-230ENST00000634433 MAGI3Q5TCQ9 1506 aa10.42□□□□□ -0.74
BRCA1-230ENST00000634433 NUP153P49790 1475 aaKnown RBP10.42□□□□□ -0.74
BRCA1-230ENST00000634433 TCOF1Q13428 1488 aaKnown RBP10.41□□□□□ -0.74
BRCA1-230ENST00000634433 PTPN23Q9H3S7 1636 aa10.4□□□□□ -0.74
BRCA1-230ENST00000634433 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
BRCA1-230ENST00000634433 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
BRCA1-230ENST00000634433 PRG4Q92954 1404 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-230ENST00000634433 GLI2P10070 1586 aa10.39□□□□□ -0.75
BRCA1-230ENST00000634433 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
BRCA1-230ENST00000634433 TROQ12816 1431 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-230ENST00000634433 ARID3CA6NKF2 412 aa10.38□□□□□ -0.75
BRCA1-230ENST00000634433 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-230ENST00000634433 ADCY10Q96PN6 1610 aa10.38□□□□□ -0.75
BRCA1-230ENST00000634433 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
BRCA1-230ENST00000634433 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
BRCA1-230ENST00000634433 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
BRCA1-230ENST00000634433 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
BRCA1-230ENST00000634433 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
BRCA1-230ENST00000634433 PTPRGP23470 1445 aa10.36□□□□□ -0.75
BRCA1-230ENST00000634433 PLEKHD1A6NEE1 506 aa10.36□□□□□ -0.75
BRCA1-230ENST00000634433 PTPRKQ15262 1439 aa10.35□□□□□ -0.75
BRCA1-230ENST00000634433 AKNAQ7Z591 1439 aa10.35□□□□□ -0.75
BRCA1-230ENST00000634433 ABCA8O94911 1581 aa10.35□□□□□ -0.75
BRCA1-230ENST00000634433 NAIPQ13075 1403 aa10.34□□□□□ -0.75
BRCA1-230ENST00000634433 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
BRCA1-230ENST00000634433 UACAQ9BZF9 1416 aa10.33□□□□□ -0.76
BRCA1-230ENST00000634433 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-230ENST00000634433 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
BRCA1-230ENST00000634433 ATP10BO94823 1461 aa10.31□□□□□ -0.76
BRCA1-230ENST00000634433 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
BRCA1-230ENST00000634433 ITSN2Q9NZM3 1697 aa10.3□□□□□ -0.76
BRCA1-230ENST00000634433 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
BRCA1-230ENST00000634433 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
BRCA1-230ENST00000634433 DAPK1P53355 1430 aa10.29□□□□□ -0.76
BRCA1-230ENST00000634433 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
BRCA1-230ENST00000634433 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
BRCA1-230ENST00000634433 GPATCH8Q9UKJ3 1502 aaKnown RBP10.28□□□□□ -0.76
BRCA1-230ENST00000634433 UHRF1BP1LA0JNW5 1464 aa10.28□□□□□ -0.76
BRCA1-230ENST00000634433 ADGRL1O94910 1474 aa10.28□□□□□ -0.76
BRCA1-230ENST00000634433 TEX14Q8IWB6 1497 aa10.27□□□□□ -0.76
BRCA1-230ENST00000634433 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.76
BRCA1-230ENST00000634433 KIF14Q15058 1648 aa10.27□□□□□ -0.76
BRCA1-230ENST00000634433 ABCC5O15440 1437 aa10.27□□□□□ -0.77
BRCA1-230ENST00000634433 DNMT1P26358 1616 aaKnown RBP10.27□□□□□ -0.77
BRCA1-230ENST00000634433 HECW2Q9P2P5 1572 aa10.27□□□□□ -0.77
BRCA1-230ENST00000634433 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
BRCA1-230ENST00000634433 MAP3K4Q9Y6R4 1608 aa10.26□□□□□ -0.77
BRCA1-230ENST00000634433 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
BRCA1-230ENST00000634433 ABCC2Q92887 1545 aa10.25□□□□□ -0.77
BRCA1-230ENST00000634433 CAMSAP2Q08AD1 1489 aa10.25□□□□□ -0.77
BRCA1-230ENST00000634433 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
BRCA1-230ENST00000634433 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-230ENST00000634433 ZNF777Q9ULD5 760 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-230ENST00000634433 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
BRCA1-230ENST00000634433 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
BRCA1-230ENST00000634433 PPP1R15AO75807 674 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-230ENST00000634433 ANKRD30AQ9BXX3 1397 aa10.22□□□□□ -0.77
BRCA1-230ENST00000634433 TSPY4P0CV99 314 aa10.21□□□□□ -0.77
BRCA1-230ENST00000634433 TSPY10P0CW01 314 aa10.21□□□□□ -0.77
BRCA1-230ENST00000634433 MPHOSPH9Q99550 1183 aa10.21□□□□□ -0.77
BRCA1-230ENST00000634433 ADGRL2O95490 1459 aa10.21□□□□□ -0.78
BRCA1-230ENST00000634433 NCOA1Q15788 1441 aa10.2□□□□□ -0.78
BRCA1-230ENST00000634433 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
BRCA1-230ENST00000634433 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
BRCA1-230ENST00000634433 FBXO41Q8TF61 875 aa10.2□□□□□ -0.78
BRCA1-230ENST00000634433 ADGBQ8N7X0 1667 aa10.19□□□□□ -0.78
BRCA1-230ENST00000634433 ASXL2Q76L83 1435 aa10.19□□□□□ -0.78
BRCA1-230ENST00000634433 KDM5BQ9UGL1 1544 aa10.17□□□□□ -0.78
BRCA1-230ENST00000634433 CROCC2H7BZ55 1655 aa10.17□□□□□ -0.78
BRCA1-230ENST00000634433 ARHGEF5Q12774 1597 aa10.17□□□□□ -0.78
BRCA1-230ENST00000634433 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
BRCA1-230ENST00000634433 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
BRCA1-230ENST00000634433 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
BRCA1-230ENST00000634433 PREX2Q70Z35 1606 aa10.15□□□□□ -0.78
BRCA1-230ENST00000634433 CENPBP07199 599 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-230ENST00000634433 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
BRCA1-230ENST00000634433 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
BRCA1-230ENST00000634433 ZCCHC11Q5TAX3 1644 aaKnown RBP10.14□□□□□ -0.79
BRCA1-230ENST00000634433 ANKRD50Q9ULJ7 1429 aa10.14□□□□□ -0.79
BRCA1-230ENST00000634433 MIER1Q8N108 512 aa10.13□□□□□ -0.79
BRCA1-230ENST00000634433 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
BRCA1-230ENST00000634433 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
BRCA1-230ENST00000634433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.13□□□□□ -0.79
BRCA1-230ENST00000634433 ANKRD30BQ9BXX2 1392 aa10.13□□□□□ -0.79
BRCA1-230ENST00000634433 DENND4BO75064 1496 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms