RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
CHD2-219ENST00000630016 RGL2O15211 777 aa11.07□□□□□ -0.64
CHD2-219ENST00000630016 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
CHD2-219ENST00000630016 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
CHD2-219ENST00000630016 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
CHD2-219ENST00000630016 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
CHD2-219ENST00000630016 ERBB3P21860 1342 aa11.06□□□□□ -0.64
CHD2-219ENST00000630016 MMRN1Q13201 1228 aa11.05□□□□□ -0.64
CHD2-219ENST00000630016 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
CHD2-219ENST00000630016 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
CHD2-219ENST00000630016 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
CHD2-219ENST00000630016 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
CHD2-219ENST00000630016 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
CHD2-219ENST00000630016 KIF3CO14782 793 aa10.91□□□□□ -0.66
CHD2-219ENST00000630016 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
CHD2-219ENST00000630016 TMC2Q8TDI7 906 aa10.9□□□□□ -0.66
CHD2-219ENST00000630016 ZNF687Q8N1G0 1237 aa10.89□□□□□ -0.67
CHD2-219ENST00000630016 HS6ST3Q8IZP7 471 aa10.87□□□□□ -0.67
CHD2-219ENST00000630016 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
CHD2-219ENST00000630016 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.673e-17■■■□□ 17
CHD2-219ENST00000630016 PPP1R37O75864 691 aa10.83□□□□□ -0.68
CHD2-219ENST00000630016 SLC34A2O95436 690 aa10.81□□□□□ -0.68
CHD2-219ENST00000630016 NUDT7P0C024 238 aa10.81□□□□□ -0.68
CHD2-219ENST00000630016 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
CHD2-219ENST00000630016 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
CHD2-219ENST00000630016 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
CHD2-219ENST00000630016 PTGER2P43116 358 aa10.77□□□□□ -0.69
CHD2-219ENST00000630016 MYT1LQ9UL68 1186 aa10.76□□□□□ -0.69
CHD2-219ENST00000630016 RYDENQ9NUL5 291 aaKnown RBP10.75□□□□□ -0.69
CHD2-219ENST00000630016 LHX6Q9UPM6 363 aa10.74□□□□□ -0.69
CHD2-219ENST00000630016 PBX2P40425 430 aa10.73□□□□□ -0.69
CHD2-219ENST00000630016 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
CHD2-219ENST00000630016 FOXK1P85037 733 aa10.72□□□□□ -0.69
CHD2-219ENST00000630016 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
CHD2-219ENST00000630016 LSM11P83369 360 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHD2-219ENST00000630016 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
CHD2-219ENST00000630016 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
CHD2-219ENST00000630016 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
CHD2-219ENST00000630016 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
CHD2-219ENST00000630016 NKX1-1Q15270 411 aaPredicted RBP10.67□□□□□ -0.7
CHD2-219ENST00000630016 DSG2Q14126 1118 aa10.66□□□□□ -0.7
CHD2-219ENST00000630016 TBC1D12O60347 775 aa10.65□□□□□ -0.7
CHD2-219ENST00000630016 AXIN2Q9Y2T1 843 aa10.64□□□□□ -0.71
CHD2-219ENST00000630016 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
CHD2-219ENST00000630016 KDM4FA0A1W2PPD8 638 aa10.6□□□□□ -0.71
CHD2-219ENST00000630016 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
CHD2-219ENST00000630016 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
CHD2-219ENST00000630016 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
CHD2-219ENST00000630016 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
CHD2-219ENST00000630016 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
CHD2-219ENST00000630016 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
CHD2-219ENST00000630016 UPF1Q92900 1129 aaKnown RBP eCLIP10.56□□□□□ -0.72
CHD2-219ENST00000630016 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
CHD2-219ENST00000630016 PDE4AP27815 886 aa10.54□□□□□ -0.72
CHD2-219ENST00000630016 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
CHD2-219ENST00000630016 TK2O00142 265 aa10.53□□□□□ -0.72
CHD2-219ENST00000630016 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
CHD2-219ENST00000630016 PSEN2P49810 448 aa10.52□□□□□ -0.73
CHD2-219ENST00000630016 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
CHD2-219ENST00000630016 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
CHD2-219ENST00000630016 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
CHD2-219ENST00000630016 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
CHD2-219ENST00000630016 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
CHD2-219ENST00000630016 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
CHD2-219ENST00000630016 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.73
CHD2-219ENST00000630016 HCSTQ9UBK5 93 aa10.46□□□□□ -0.73
CHD2-219ENST00000630016 HRO43593 1189 aa10.45□□□□□ -0.74
CHD2-219ENST00000630016 BCL2L12Q9HB09 334 aa10.43□□□□□ -0.74
CHD2-219ENST00000630016 EVI5O60447 810 aa10.42□□□□□ -0.74
CHD2-219ENST00000630016 FOSBP53539 338 aa10.42□□□□□ -0.74
CHD2-219ENST00000630016 MFSD10Q14728 455 aa10.42□□□□□ -0.74
CHD2-219ENST00000630016 JPH4Q96JJ6 628 aa10.41□□□□□ -0.74
CHD2-219ENST00000630016 PTPREP23469 700 aa10.4□□□□□ -0.74
CHD2-219ENST00000630016 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
CHD2-219ENST00000630016 ANO8Q9HCE9 1232 aaPredicted RBP10.39□□□□□ -0.75
CHD2-219ENST00000630016 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
CHD2-219ENST00000630016 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
CHD2-219ENST00000630016 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
CHD2-219ENST00000630016 SLC4A5Q9BY07 1137 aa10.37□□□□□ -0.75
CHD2-219ENST00000630016 PLA2G2EQ9NZK7 142 aa10.37□□□□□ -0.75
CHD2-219ENST00000630016 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
CHD2-219ENST00000630016 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
CHD2-219ENST00000630016 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
CHD2-219ENST00000630016 ADAM33Q9BZ11 813 aa10.32□□□□□ -0.76
CHD2-219ENST00000630016 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
CHD2-219ENST00000630016 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
CHD2-219ENST00000630016 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
CHD2-219ENST00000630016 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
CHD2-219ENST00000630016 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
CHD2-219ENST00000630016 PPP1R3GB7ZBB8 358 aa10.27□□□□□ -0.77
CHD2-219ENST00000630016 PTPN5P54829 565 aa10.27□□□□□ -0.77
CHD2-219ENST00000630016 PCDHGA10Q9Y5H3 936 aa10.27□□□□□ -0.77
CHD2-219ENST00000630016 PHF14O94880 888 aa10.26□□□□□ -0.77
CHD2-219ENST00000630016 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
CHD2-219ENST00000630016 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
CHD2-219ENST00000630016 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
CHD2-219ENST00000630016 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
CHD2-219ENST00000630016 WNT2BQ93097 391 aa10.24□□□□□ -0.77
CHD2-219ENST00000630016 DPYSL4O14531 572 aa10.22□□□□□ -0.77
CHD2-219ENST00000630016 EPAS1Q99814 870 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms