RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 A0A0U1RQG5 324 aaPredicted RBP16.7■□□□□ 0.26
SYNGAP1-208ENST00000629380 SOGA1O94964 1423 aa16.7■□□□□ 0.26
SYNGAP1-208ENST00000629380 GBP4Q96PP9 640 aa16.7■□□□□ 0.26
SYNGAP1-208ENST00000629380 PRM3Q9NNZ6 103 aa16.69■□□□□ 0.26
SYNGAP1-208ENST00000629380 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
SYNGAP1-208ENST00000629380 RGS3P49796 1198 aa16.68■□□□□ 0.26
SYNGAP1-208ENST00000629380 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
SYNGAP1-208ENST00000629380 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
SYNGAP1-208ENST00000629380 TNNT3P45378 269 aaPredicted RBP16.67■□□□□ 0.26
SYNGAP1-208ENST00000629380 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
SYNGAP1-208ENST00000629380 SETQ01105 290 aaPredicted RBP16.65■□□□□ 0.26
SYNGAP1-208ENST00000629380 PHF14O94880 888 aa16.64■□□□□ 0.26
SYNGAP1-208ENST00000629380 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
SYNGAP1-208ENST00000629380 CSPP1Q1MSJ5 1256 aa16.64■□□□□ 0.25
SYNGAP1-208ENST00000629380 CHMP4AQ9BY43 222 aa16.63■□□□□ 0.25
SYNGAP1-208ENST00000629380 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
SYNGAP1-208ENST00000629380 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
SYNGAP1-208ENST00000629380 CALD1Q05682 793 aaKnown RBP16.63■□□□□ 0.25
SYNGAP1-208ENST00000629380 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
SYNGAP1-208ENST00000629380 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
SYNGAP1-208ENST00000629380 CARD11Q9BXL7 1154 aa16.61■□□□□ 0.25
SYNGAP1-208ENST00000629380 MIER1Q8N108 512 aa16.61■□□□□ 0.25
SYNGAP1-208ENST00000629380 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
SYNGAP1-208ENST00000629380 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-208ENST00000629380 IPO8O15397 1037 aaKnown RBP16.58■□□□□ 0.25
SYNGAP1-208ENST00000629380 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
SYNGAP1-208ENST00000629380 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
SYNGAP1-208ENST00000629380 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
SYNGAP1-208ENST00000629380 MLECQ14165 292 aa16.57■□□□□ 0.24
SYNGAP1-208ENST00000629380 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
SYNGAP1-208ENST00000629380 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-208ENST00000629380 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
SYNGAP1-208ENST00000629380 CEP89Q96ST8 783 aa16.55■□□□□ 0.24
SYNGAP1-208ENST00000629380 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-208ENST00000629380 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-208ENST00000629380 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
SYNGAP1-208ENST00000629380 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
SYNGAP1-208ENST00000629380 TPM3P06753 285 aa16.53■□□□□ 0.24
SYNGAP1-208ENST00000629380 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
SYNGAP1-208ENST00000629380 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
SYNGAP1-208ENST00000629380 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.23
SYNGAP1-208ENST00000629380 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-208ENST00000629380 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
SYNGAP1-208ENST00000629380 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
SYNGAP1-208ENST00000629380 TMF1P82094 1093 aa16.5■□□□□ 0.23
SYNGAP1-208ENST00000629380 CCDC70Q6NSX1 233 aa16.5■□□□□ 0.23
SYNGAP1-208ENST00000629380 CCDC18Q5T9S5 1454 aa16.5■□□□□ 0.23
SYNGAP1-208ENST00000629380 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
SYNGAP1-208ENST00000629380 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
SYNGAP1-208ENST00000629380 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
SYNGAP1-208ENST00000629380 CALRP27797 417 aaKnown RBP16.48■□□□□ 0.23
SYNGAP1-208ENST00000629380 SPAG9O60271 1321 aaKnown RBP16.47■□□□□ 0.23
SYNGAP1-208ENST00000629380 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
SYNGAP1-208ENST00000629380 HSP90B1P14625 803 aaKnown RBP16.46■□□□□ 0.23
SYNGAP1-208ENST00000629380 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 ANKRD30AQ9BXX3 1397 aa16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 GGT6Q6P531 493 aa16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
SYNGAP1-208ENST00000629380 WIZO95785 1651 aa16.44■□□□□ 0.22
SYNGAP1-208ENST00000629380 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
SYNGAP1-208ENST00000629380 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
SYNGAP1-208ENST00000629380 HMMRO75330 724 aa16.43■□□□□ 0.22
SYNGAP1-208ENST00000629380 TPM2P07951 284 aa16.42■□□□□ 0.22
SYNGAP1-208ENST00000629380 MORC1Q86VD1 984 aa16.42■□□□□ 0.22
SYNGAP1-208ENST00000629380 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
SYNGAP1-208ENST00000629380 TPM1P09493 284 aa16.41■□□□□ 0.22
SYNGAP1-208ENST00000629380 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
SYNGAP1-208ENST00000629380 GPS2Q13227 327 aa16.41■□□□□ 0.22
SYNGAP1-208ENST00000629380 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
SYNGAP1-208ENST00000629380 DEKP35659 375 aaKnown RBP16.41■□□□□ 0.22
SYNGAP1-208ENST00000629380 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
SYNGAP1-208ENST00000629380 HDGFL2Q7Z4V5 671 aaPredicted RBP16.4■□□□□ 0.22
SYNGAP1-208ENST00000629380 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
SYNGAP1-208ENST00000629380 GOLGA6L3A6NEY3 463 aa16.38■□□□□ 0.21
SYNGAP1-208ENST00000629380 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-208ENST00000629380 TCEAL9Q9UHQ7 104 aa16.37■□□□□ 0.21
SYNGAP1-208ENST00000629380 SPRYD3Q8NCJ5 442 aa16.37■□□□□ 0.21
SYNGAP1-208ENST00000629380 KRI1Q8N9T8 703 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-208ENST00000629380 ITPRIPQ8IWB1 547 aa16.37■□□□□ 0.21
SYNGAP1-208ENST00000629380 STK31Q9BXU1 1019 aa16.36■□□□□ 0.21
SYNGAP1-208ENST00000629380 PHLDB1Q86UU1 1377 aa16.36■□□□□ 0.21
SYNGAP1-208ENST00000629380 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
SYNGAP1-208ENST00000629380 ST18O60284 1047 aa16.36■□□□□ 0.21
SYNGAP1-208ENST00000629380 VPS53Q5VIR6 699 aa16.35■□□□□ 0.21
SYNGAP1-208ENST00000629380 ATP6V1DQ9Y5K8 247 aa16.35■□□□□ 0.21
SYNGAP1-208ENST00000629380 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
SYNGAP1-208ENST00000629380 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
SYNGAP1-208ENST00000629380 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
SYNGAP1-208ENST00000629380 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
SYNGAP1-208ENST00000629380 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
SYNGAP1-208ENST00000629380 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
SYNGAP1-208ENST00000629380 G3V3G9 751 aa16.33■□□□□ 0.21
SYNGAP1-208ENST00000629380 PDE4CQ08493 712 aa16.33■□□□□ 0.21
SYNGAP1-208ENST00000629380 DCAF8Q5TAQ9 597 aa16.33■□□□□ 0.21
SYNGAP1-208ENST00000629380 TPD52L1Q16890 204 aaPredicted RBP16.33■□□□□ 0.2
SYNGAP1-208ENST00000629380 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
SYNGAP1-208ENST00000629380 UACAQ9BZF9 1416 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms