RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 POGZQ7Z3K3 1410 aa27.28■■□□□ 1.96
PDCD6-214ENST00000628729 CASKIN1Q8WXD9 1431 aa27.24■■□□□ 1.95
PDCD6-214ENST00000628729 SCAPERQ9BY12 1400 aa27.24■■□□□ 1.95
PDCD6-214ENST00000628729 RIMS1Q86UR5 1692 aaKnown RBP27.22■■□□□ 1.95
PDCD6-214ENST00000628729 MAGI2Q86UL8 1455 aa27.2■■□□□ 1.95
PDCD6-214ENST00000628729 CDC42BPBQ9Y5S2 1711 aa27.2■■□□□ 1.94
PDCD6-214ENST00000628729 CCDC18Q5T9S5 1454 aa27.19■■□□□ 1.94
PDCD6-214ENST00000628729 CLIP1P30622 1438 aa27.18■■□□□ 1.94
PDCD6-214ENST00000628729 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
PDCD6-214ENST00000628729 PREX2Q70Z35 1606 aa27.18■■□□□ 1.94
PDCD6-214ENST00000628729 ARID4BQ4LE39 1312 aaPredicted RBP27.17■■□□□ 1.94
PDCD6-214ENST00000628729 CDK11AQ9UQ88 783 aaPredicted RBP27.17■■□□□ 1.94
PDCD6-214ENST00000628729 FYCO1Q9BQS8 1478 aa27.17■■□□□ 1.94
PDCD6-214ENST00000628729 KDM5CP41229 1560 aa27.16■■□□□ 1.94
PDCD6-214ENST00000628729 EFCAB2Q5VUJ9 269 aa27.12■■□□□ 1.93
PDCD6-214ENST00000628729 CDC42BPAQ5VT25 1732 aa27.11■■□□□ 1.93
PDCD6-214ENST00000628729 ZNF518AQ6AHZ1 1483 aa27.11■■□□□ 1.93
PDCD6-214ENST00000628729 ABCC1P33527 1531 aa27.09■■□□□ 1.93
PDCD6-214ENST00000628729 FER1L4A9Z1Z3 1794 aa27.09■■□□□ 1.93
PDCD6-214ENST00000628729 LMTK3Q96Q04 1460 aa27.08■■□□□ 1.93
PDCD6-214ENST00000628729 ITSN2Q9NZM3 1697 aa27.07■■□□□ 1.92
PDCD6-214ENST00000628729 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
PDCD6-214ENST00000628729 C9orf84Q5VXU9 1444 aa27.06■■□□□ 1.92
PDCD6-214ENST00000628729 ATP10AO60312 1499 aa27.06■■□□□ 1.92
PDCD6-214ENST00000628729 DIP2CQ9Y2E4 1556 aa27.05■■□□□ 1.92
PDCD6-214ENST00000628729 ABCA6Q8N139 1617 aa27.05■■□□□ 1.92
PDCD6-214ENST00000628729 AFAP1Q8N556 730 aa27.01■■□□□ 1.91
PDCD6-214ENST00000628729 TRAPPC8Q9Y2L5 1435 aa27■■□□□ 1.91
PDCD6-214ENST00000628729 ILDR1Q86SU0 546 aaPredicted RBP26.99■■□□□ 1.91
PDCD6-214ENST00000628729 SAMD9LQ8IVG5 1584 aa26.98■■□□□ 1.91
PDCD6-214ENST00000628729 REREQ9P2R6 1566 aa26.98■■□□□ 1.91
PDCD6-214ENST00000628729 MLECQ14165 292 aa26.97■■□□□ 1.91
PDCD6-214ENST00000628729 MLH3Q9UHC1 1453 aa26.96■■□□□ 1.91
PDCD6-214ENST00000628729 KIDINS220Q9ULH0 1771 aa26.95■■□□□ 1.9
PDCD6-214ENST00000628729 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
PDCD6-214ENST00000628729 SYCP2Q9BX26 1530 aa26.91■■□□□ 1.9
PDCD6-214ENST00000628729 PLPPR3Q6T4P5 718 aa26.9■■□□□ 1.9
PDCD6-214ENST00000628729 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
PDCD6-214ENST00000628729 AGLP35573 1532 aa26.85■■□□□ 1.89
PDCD6-214ENST00000628729 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
PDCD6-214ENST00000628729 PREX1Q8TCU6 1659 aa26.84■■□□□ 1.89
PDCD6-214ENST00000628729 HSPA2P54652 639 aa26.83■■□□□ 1.89
PDCD6-214ENST00000628729 EHBP1L1Q8N3D4 1523 aa26.82■■□□□ 1.88
PDCD6-214ENST00000628729 INO80Q9ULG1 1556 aaPredicted RBP26.81■■□□□ 1.88
PDCD6-214ENST00000628729 MYT1LQ9UL68 1186 aa26.8■■□□□ 1.88
PDCD6-214ENST00000628729 MTUS2Q5JR59 1369 aa26.8■■□□□ 1.88
PDCD6-214ENST00000628729 C3P01024 1663 aa26.79■■□□□ 1.88
PDCD6-214ENST00000628729 CEBPAP49715 358 aaPredicted RBP26.78■■□□□ 1.88
PDCD6-214ENST00000628729 ZNF777Q9ULD5 760 aaPredicted RBP26.78■■□□□ 1.88
PDCD6-214ENST00000628729 ATP7AQ04656 1500 aa26.76■■□□□ 1.87
PDCD6-214ENST00000628729 CCNB3Q8WWL7 1395 aa26.76■■□□□ 1.87
PDCD6-214ENST00000628729 KIAA1107Q9UPP5 1409 aa26.75■■□□□ 1.87
PDCD6-214ENST00000628729 PLXNC1O60486 1568 aa26.75■■□□□ 1.87
PDCD6-214ENST00000628729 HNRNPMP52272 730 aaKnown RBP eCLIP26.73■■□□□ 1.872e-7■■■■■ 37.9
PDCD6-214ENST00000628729 PLEKHH2Q8IVE3 1493 aa26.73■■□□□ 1.87
PDCD6-214ENST00000628729 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
PDCD6-214ENST00000628729 CFDP1Q9UEE9 299 aaPredicted RBP26.71■■□□□ 1.87
PDCD6-214ENST00000628729 SPAG9O60271 1321 aaKnown RBP26.68■■□□□ 1.86
PDCD6-214ENST00000628729 MBD5Q9P267 1494 aa26.68■■□□□ 1.86
PDCD6-214ENST00000628729 ZNF644Q9H582 1327 aaPredicted RBP26.67■■□□□ 1.86
PDCD6-214ENST00000628729 STRCQ7RTU9 1775 aa26.66■■□□□ 1.86
PDCD6-214ENST00000628729 MROH2AA6NES4 1674 aa26.66■■□□□ 1.86
PDCD6-214ENST00000628729 UHRF1BP1Q6BDS2 1440 aa26.64■■□□□ 1.85
PDCD6-214ENST00000628729 NCOA2Q15596 1464 aa26.63■■□□□ 1.85
PDCD6-214ENST00000628729 ADGBQ8N7X0 1667 aa26.63■■□□□ 1.85
PDCD6-214ENST00000628729 A2MP01023 1474 aa26.62■■□□□ 1.85
PDCD6-214ENST00000628729 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
PDCD6-214ENST00000628729 SETD1BQ9UPS6 1966 aaKnown RBP26.6■■□□□ 1.85
PDCD6-214ENST00000628729 CLTCQ00610 1675 aaKnown RBP26.6■■□□□ 1.85
PDCD6-214ENST00000628729 LOC105371045A0A1W2PR82 267 aa26.6■■□□□ 1.85
PDCD6-214ENST00000628729 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
PDCD6-214ENST00000628729 FBXO41Q8TF61 875 aa26.59■■□□□ 1.85
PDCD6-214ENST00000628729 CAMSAP2Q08AD1 1489 aa26.58■■□□□ 1.85
PDCD6-214ENST00000628729 LRRC9Q6ZRR7 1453 aa26.53■■□□□ 1.84
PDCD6-214ENST00000628729 CCDC141Q6ZP82 1450 aa26.52■■□□□ 1.84
PDCD6-214ENST00000628729 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
PDCD6-214ENST00000628729 ESF1Q9H501 851 aaKnown RBP26.51■■□□□ 1.83
PDCD6-214ENST00000628729 NPATQ14207 1427 aa26.5■■□□□ 1.83
PDCD6-214ENST00000628729 ZMYM3Q14202 1370 aa26.49■■□□□ 1.83
PDCD6-214ENST00000628729 MYO3AQ8NEV4 1616 aa26.49■■□□□ 1.83
PDCD6-214ENST00000628729 ARHGEF5Q12774 1597 aa26.48■■□□□ 1.83
PDCD6-214ENST00000628729 ZNF142P52746 1687 aaPredicted RBP26.47■■□□□ 1.83
PDCD6-214ENST00000628729 MAP3K1Q13233 1512 aa26.44■■□□□ 1.82
PDCD6-214ENST00000628729 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
PDCD6-214ENST00000628729 PTPRKQ15262 1439 aa26.43■■□□□ 1.82
PDCD6-214ENST00000628729 GGT6Q6P531 493 aa26.42■■□□□ 1.82
PDCD6-214ENST00000628729 DHX29Q7Z478 1369 aaKnown RBP26.42■■□□□ 1.82
PDCD6-214ENST00000628729 CAMSAP1Q5T5Y3 1602 aa26.41■■□□□ 1.82
PDCD6-214ENST00000628729 KANK4Q5T7N3 995 aaPredicted RBP26.4■■□□□ 1.82
PDCD6-214ENST00000628729 CERKQ8TCT0 537 aa26.4■■□□□ 1.82
PDCD6-214ENST00000628729 CEP170BQ9Y4F5 1589 aaPredicted RBP26.4■■□□□ 1.82
PDCD6-214ENST00000628729 PTPRTO14522 1441 aa26.39■■□□□ 1.81
PDCD6-214ENST00000628729 MAST1Q9Y2H9 1570 aa26.36■■□□□ 1.81
PDCD6-214ENST00000628729 KDM5DQ9BY66 1539 aa26.34■■□□□ 1.81
PDCD6-214ENST00000628729 LTBP4Q8N2S1 1624 aa26.33■■□□□ 1.81
PDCD6-214ENST00000628729 DMRT2Q9Y5R5 561 aa26.33■■□□□ 1.81
PDCD6-214ENST00000628729 MYOM3Q5VTT5 1437 aa26.32■■□□□ 1.8
PDCD6-214ENST00000628729 FAM135AQ9P2D6 1515 aa26.32■■□□□ 1.8
PDCD6-214ENST00000628729 RNF17Q9BXT8 1623 aaKnown RBP26.3■■□□□ 1.8
PDCD6-214ENST00000628729 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms