RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
TCF4-260ENST00000627685 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
TCF4-260ENST00000627685 ABCC10Q5T3U5 1492 aa12.99□□□□□ -0.33
TCF4-260ENST00000627685 CARMIL2Q6F5E8 1435 aa12.99□□□□□ -0.33
TCF4-260ENST00000627685 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
TCF4-260ENST00000627685 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
TCF4-260ENST00000627685 EVX2Q03828 476 aa12.99□□□□□ -0.33
TCF4-260ENST00000627685 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
TCF4-260ENST00000627685 UACAQ9BZF9 1416 aa12.96□□□□□ -0.33
TCF4-260ENST00000627685 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
TCF4-260ENST00000627685 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
TCF4-260ENST00000627685 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
TCF4-260ENST00000627685 GOLGA3Q08378 1498 aa12.93□□□□□ -0.34
TCF4-260ENST00000627685 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
TCF4-260ENST00000627685 GLI2P10070 1586 aa12.9□□□□□ -0.34
TCF4-260ENST00000627685 ASXL2Q76L83 1435 aa12.9□□□□□ -0.34
TCF4-260ENST00000627685 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
TCF4-260ENST00000627685 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
TCF4-260ENST00000627685 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
TCF4-260ENST00000627685 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
TCF4-260ENST00000627685 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
TCF4-260ENST00000627685 EFCAB5A4FU69 1503 aa12.86□□□□□ -0.35
TCF4-260ENST00000627685 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
TCF4-260ENST00000627685 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
TCF4-260ENST00000627685 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
TCF4-260ENST00000627685 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
TCF4-260ENST00000627685 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
TCF4-260ENST00000627685 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
TCF4-260ENST00000627685 ATP10BO94823 1461 aa12.84□□□□□ -0.35
TCF4-260ENST00000627685 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
TCF4-260ENST00000627685 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
TCF4-260ENST00000627685 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
TCF4-260ENST00000627685 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
TCF4-260ENST00000627685 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
TCF4-260ENST00000627685 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
TCF4-260ENST00000627685 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
TCF4-260ENST00000627685 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
TCF4-260ENST00000627685 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
TCF4-260ENST00000627685 KDM6BO15054 1643 aa12.74□□□□□ -0.37
TCF4-260ENST00000627685 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
TCF4-260ENST00000627685 NUBP1P53384 320 aa12.74□□□□□ -0.37
TCF4-260ENST00000627685 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
TCF4-260ENST00000627685 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
TCF4-260ENST00000627685 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
TCF4-260ENST00000627685 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
TCF4-260ENST00000627685 GABBR2O75899 941 aa12.72□□□□□ -0.37
TCF4-260ENST00000627685 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
TCF4-260ENST00000627685 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
TCF4-260ENST00000627685 PCF11O94913 1555 aaKnown RBP12.7□□□□□ -0.38
TCF4-260ENST00000627685 PHF12Q96QT6 1004 aa12.7□□□□□ -0.38
TCF4-260ENST00000627685 TTC37Q6PGP7 1564 aa12.68□□□□□ -0.38
TCF4-260ENST00000627685 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
TCF4-260ENST00000627685 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
TCF4-260ENST00000627685 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
TCF4-260ENST00000627685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-260ENST00000627685 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
TCF4-260ENST00000627685 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
TCF4-260ENST00000627685 FMN1Q68DA7 1419 aa12.65□□□□□ -0.38
TCF4-260ENST00000627685 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
TCF4-260ENST00000627685 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
TCF4-260ENST00000627685 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
TCF4-260ENST00000627685 TEX14Q8IWB6 1497 aa12.65□□□□□ -0.38
TCF4-260ENST00000627685 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
TCF4-260ENST00000627685 KIF14Q15058 1648 aa12.63□□□□□ -0.39
TCF4-260ENST00000627685 CLCN6P51797 869 aa12.63□□□□□ -0.39
TCF4-260ENST00000627685 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
TCF4-260ENST00000627685 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
TCF4-260ENST00000627685 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
TCF4-260ENST00000627685 CLIP1P30622 1438 aa12.61□□□□□ -0.39
TCF4-260ENST00000627685 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
TCF4-260ENST00000627685 NEO1Q92859 1461 aa12.59□□□□□ -0.39
TCF4-260ENST00000627685 CEP162Q5TB80 1403 aa12.57□□□□□ -0.4
TCF4-260ENST00000627685 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
TCF4-260ENST00000627685 TROQ12816 1431 aaPredicted RBP12.56□□□□□ -0.4
TCF4-260ENST00000627685 GSE1Q14687 1217 aa12.56□□□□□ -0.4
TCF4-260ENST00000627685 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
TCF4-260ENST00000627685 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
TCF4-260ENST00000627685 RICTORQ6R327 1708 aa12.55□□□□□ -0.4
TCF4-260ENST00000627685 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
TCF4-260ENST00000627685 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
TCF4-260ENST00000627685 ZMYM4Q5VZL5 1548 aa12.53□□□□□ -0.4
TCF4-260ENST00000627685 MAP3K13O43283 966 aa12.53□□□□□ -0.4
TCF4-260ENST00000627685 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
TCF4-260ENST00000627685 SIGLEC1Q9BZZ2 1709 aa12.53□□□□□ -0.4
TCF4-260ENST00000627685 PLCH2O75038 1416 aa12.53□□□□□ -0.4
TCF4-260ENST00000627685 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
TCF4-260ENST00000627685 FANCAO15360 1455 aa12.52□□□□□ -0.41
TCF4-260ENST00000627685 PYGBP11216 843 aa12.51□□□□□ -0.41
TCF4-260ENST00000627685 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
TCF4-260ENST00000627685 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
TCF4-260ENST00000627685 CFAP74Q9C0B2 1584 aa12.51□□□□□ -0.41
TCF4-260ENST00000627685 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
TCF4-260ENST00000627685 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
TCF4-260ENST00000627685 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
TCF4-260ENST00000627685 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
TCF4-260ENST00000627685 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
TCF4-260ENST00000627685 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
TCF4-260ENST00000627685 KDM5CP41229 1560 aa12.47□□□□□ -0.41
TCF4-260ENST00000627685 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
TCF4-260ENST00000627685 POGZQ7Z3K3 1410 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms