RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 KIF14Q15058 1648 aa17.39■□□□□ 0.38
SSBP4-215ENST00000625926 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
SSBP4-215ENST00000625926 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
SSBP4-215ENST00000625926 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
SSBP4-215ENST00000625926 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
SSBP4-215ENST00000625926 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
SSBP4-215ENST00000625926 ARHGAP5Q13017 1502 aa17.36■□□□□ 0.37
SSBP4-215ENST00000625926 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
SSBP4-215ENST00000625926 ZMYM4Q5VZL5 1548 aa17.34■□□□□ 0.37
SSBP4-215ENST00000625926 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
SSBP4-215ENST00000625926 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
SSBP4-215ENST00000625926 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
SSBP4-215ENST00000625926 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
SSBP4-215ENST00000625926 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
SSBP4-215ENST00000625926 MTUS2Q5JR59 1369 aa17.3■□□□□ 0.36
SSBP4-215ENST00000625926 ZNF777Q9ULD5 760 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-215ENST00000625926 PTPRMP28827 1452 aa17.3■□□□□ 0.36
SSBP4-215ENST00000625926 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
SSBP4-215ENST00000625926 DISP3Q9P2K9 1392 aa17.29■□□□□ 0.36
SSBP4-215ENST00000625926 MLECQ14165 292 aa17.29■□□□□ 0.36
SSBP4-215ENST00000625926 MYO5CQ9NQX4 1742 aa17.29■□□□□ 0.36
SSBP4-215ENST00000625926 ATP10AO60312 1499 aa17.29■□□□□ 0.36
SSBP4-215ENST00000625926 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-215ENST00000625926 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.35
SSBP4-215ENST00000625926 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
SSBP4-215ENST00000625926 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
SSBP4-215ENST00000625926 C9orf84Q5VXU9 1444 aa17.25■□□□□ 0.35
SSBP4-215ENST00000625926 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
SSBP4-215ENST00000625926 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
SSBP4-215ENST00000625926 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■■□□□ 12.6
SSBP4-215ENST00000625926 MLH3Q9UHC1 1453 aa17.23■□□□□ 0.35
SSBP4-215ENST00000625926 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
SSBP4-215ENST00000625926 KDM5CP41229 1560 aa17.22■□□□□ 0.35
SSBP4-215ENST00000625926 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
SSBP4-215ENST00000625926 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
SSBP4-215ENST00000625926 ABCC1P33527 1531 aa17.21■□□□□ 0.34
SSBP4-215ENST00000625926 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
SSBP4-215ENST00000625926 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
SSBP4-215ENST00000625926 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
SSBP4-215ENST00000625926 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
SSBP4-215ENST00000625926 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
SSBP4-215ENST00000625926 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
SSBP4-215ENST00000625926 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
SSBP4-215ENST00000625926 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-215ENST00000625926 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
SSBP4-215ENST00000625926 SAMD9LQ8IVG5 1584 aa17.13■□□□□ 0.33
SSBP4-215ENST00000625926 DIP2CQ9Y2E4 1556 aa17.13■□□□□ 0.33
SSBP4-215ENST00000625926 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
SSBP4-215ENST00000625926 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
SSBP4-215ENST00000625926 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
SSBP4-215ENST00000625926 CDC42BPAQ5VT25 1732 aa17.12■□□□□ 0.33
SSBP4-215ENST00000625926 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
SSBP4-215ENST00000625926 NCOA2Q15596 1464 aa17.1■□□□□ 0.33
SSBP4-215ENST00000625926 AGLP35573 1532 aa17.1■□□□□ 0.33
SSBP4-215ENST00000625926 SPATA31D1Q6ZQQ2 1576 aa17.1■□□□□ 0.33
SSBP4-215ENST00000625926 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
SSBP4-215ENST00000625926 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
SSBP4-215ENST00000625926 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-215ENST00000625926 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
SSBP4-215ENST00000625926 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
SSBP4-215ENST00000625926 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
SSBP4-215ENST00000625926 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
SSBP4-215ENST00000625926 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
SSBP4-215ENST00000625926 HSPA2P54652 639 aa17.07■□□□□ 0.32
SSBP4-215ENST00000625926 APLP2Q06481 763 aa17.07■□□□□ 0.32
SSBP4-215ENST00000625926 ATP7AQ04656 1500 aa17.04■□□□□ 0.32
SSBP4-215ENST00000625926 MAP3K1Q13233 1512 aa17.04■□□□□ 0.32
SSBP4-215ENST00000625926 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
SSBP4-215ENST00000625926 RTEL1-TNFRSF6BF6WH68 1400 aa17.04■□□□□ 0.32
SSBP4-215ENST00000625926 A2MP01023 1474 aa17.03■□□□□ 0.32
SSBP4-215ENST00000625926 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
SSBP4-215ENST00000625926 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
SSBP4-215ENST00000625926 GGT6Q6P531 493 aa17.02■□□□□ 0.32
SSBP4-215ENST00000625926 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.31
SSBP4-215ENST00000625926 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
SSBP4-215ENST00000625926 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
SSBP4-215ENST00000625926 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
SSBP4-215ENST00000625926 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
SSBP4-215ENST00000625926 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
SSBP4-215ENST00000625926 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
SSBP4-215ENST00000625926 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
SSBP4-215ENST00000625926 ZMYM3Q14202 1370 aa16.98■□□□□ 0.31
SSBP4-215ENST00000625926 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
SSBP4-215ENST00000625926 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
SSBP4-215ENST00000625926 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.3
SSBP4-215ENST00000625926 KIF3BO15066 747 aa16.95■□□□□ 0.3
SSBP4-215ENST00000625926 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
SSBP4-215ENST00000625926 CERKQ8TCT0 537 aa16.94■□□□□ 0.3
SSBP4-215ENST00000625926 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
SSBP4-215ENST00000625926 NPATQ14207 1427 aa16.91■□□□□ 0.3
SSBP4-215ENST00000625926 ARHGEF5Q12774 1597 aa16.9■□□□□ 0.3
SSBP4-215ENST00000625926 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
SSBP4-215ENST00000625926 ADGBQ8N7X0 1667 aa16.86■□□□□ 0.29
SSBP4-215ENST00000625926 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
SSBP4-215ENST00000625926 C3P01024 1663 aa16.85■□□□□ 0.29
SSBP4-215ENST00000625926 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
SSBP4-215ENST00000625926 ABCC5O15440 1437 aa16.81■□□□□ 0.28
SSBP4-215ENST00000625926 FGD6Q6ZV73 1430 aa16.81■□□□□ 0.28
SSBP4-215ENST00000625926 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
SSBP4-215ENST00000625926 RRP7BPQ9NSQ0 103 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms