RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
VARS2-213ENST00000625423 ABCC5O15440 1437 aa15.69■□□□□ 0.1
VARS2-213ENST00000625423 ROCK1Q13464 1354 aa15.68■□□□□ 0.1
VARS2-213ENST00000625423 HNRNPUQ00839 825 aaKnown RBP eCLIP15.68■□□□□ 0.1
VARS2-213ENST00000625423 NUP153P49790 1475 aaKnown RBP15.68■□□□□ 0.1
VARS2-213ENST00000625423 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
VARS2-213ENST00000625423 ANKRD30BQ9BXX2 1392 aa15.67■□□□□ 0.1
VARS2-213ENST00000625423 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
VARS2-213ENST00000625423 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
VARS2-213ENST00000625423 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
VARS2-213ENST00000625423 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
VARS2-213ENST00000625423 DNMT1P26358 1616 aaKnown RBP15.64■□□□□ 0.09
VARS2-213ENST00000625423 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
VARS2-213ENST00000625423 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
VARS2-213ENST00000625423 CNTLNQ9NXG0 1405 aa15.63■□□□□ 0.09
VARS2-213ENST00000625423 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
VARS2-213ENST00000625423 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
VARS2-213ENST00000625423 CCDC7Q96M83 1385 aa15.61■□□□□ 0.09
VARS2-213ENST00000625423 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
VARS2-213ENST00000625423 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
VARS2-213ENST00000625423 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
VARS2-213ENST00000625423 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
VARS2-213ENST00000625423 CFDP1Q9UEE9 299 aaPredicted RBP15.6■□□□□ 0.09
VARS2-213ENST00000625423 TROQ12816 1431 aaPredicted RBP15.58■□□□□ 0.09
VARS2-213ENST00000625423 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.08
VARS2-213ENST00000625423 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
VARS2-213ENST00000625423 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
VARS2-213ENST00000625423 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
VARS2-213ENST00000625423 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
VARS2-213ENST00000625423 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
VARS2-213ENST00000625423 PZPP20742 1482 aa15.55■□□□□ 0.08
VARS2-213ENST00000625423 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
VARS2-213ENST00000625423 SPATA31E1Q6ZUB1 1445 aa15.55■□□□□ 0.08
VARS2-213ENST00000625423 GPATCH8Q9UKJ3 1502 aaKnown RBP15.54■□□□□ 0.08
VARS2-213ENST00000625423 FAM9BQ8IZU0 186 aa15.54■□□□□ 0.08
VARS2-213ENST00000625423 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
VARS2-213ENST00000625423 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
VARS2-213ENST00000625423 CEP170Q5SW79 1584 aa15.52■□□□□ 0.08
VARS2-213ENST00000625423 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
VARS2-213ENST00000625423 KIF14Q15058 1648 aa15.51■□□□□ 0.07
VARS2-213ENST00000625423 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
VARS2-213ENST00000625423 PKD2Q13563 968 aa15.5■□□□□ 0.07
VARS2-213ENST00000625423 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
VARS2-213ENST00000625423 ANP32EQ9BTT0 268 aa15.5■□□□□ 0.07
VARS2-213ENST00000625423 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
VARS2-213ENST00000625423 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
VARS2-213ENST00000625423 ITSN2Q9NZM3 1697 aa15.49■□□□□ 0.07
VARS2-213ENST00000625423 CARMIL2Q6F5E8 1435 aa15.48■□□□□ 0.07
VARS2-213ENST00000625423 ANKRD30AQ9BXX3 1397 aa15.48■□□□□ 0.07
VARS2-213ENST00000625423 ADGRL2O95490 1459 aa15.48■□□□□ 0.07
VARS2-213ENST00000625423 ADGBQ8N7X0 1667 aa15.47■□□□□ 0.07
VARS2-213ENST00000625423 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.07
VARS2-213ENST00000625423 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
VARS2-213ENST00000625423 PLEKHD1A6NEE1 506 aa15.45■□□□□ 0.06
VARS2-213ENST00000625423 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
VARS2-213ENST00000625423 ANKRD50Q9ULJ7 1429 aa15.45■□□□□ 0.06
VARS2-213ENST00000625423 CNGB1Q14028 1251 aaPredicted RBP15.45■□□□□ 0.06
VARS2-213ENST00000625423 ZBED9Q6R2W3 1325 aa15.44■□□□□ 0.06
VARS2-213ENST00000625423 USP47Q96K76 1375 aa15.44■□□□□ 0.06
VARS2-213ENST00000625423 NUP160Q12769 1436 aa15.43■□□□□ 0.06
VARS2-213ENST00000625423 CROCC2H7BZ55 1655 aa15.43■□□□□ 0.06
VARS2-213ENST00000625423 NUP155O75694 1391 aa15.42■□□□□ 0.06
VARS2-213ENST00000625423 POLR1AO95602 1720 aaPredicted RBP15.42■□□□□ 0.06
VARS2-213ENST00000625423 DHX29Q7Z478 1369 aaKnown RBP15.41■□□□□ 0.06
VARS2-213ENST00000625423 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
VARS2-213ENST00000625423 ATP10BO94823 1461 aa15.4■□□□□ 0.06
VARS2-213ENST00000625423 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
VARS2-213ENST00000625423 PPP4R2Q9NY27 417 aa15.39■□□□□ 0.05
VARS2-213ENST00000625423 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
VARS2-213ENST00000625423 BCORL1Q5H9F3 1711 aa15.39■□□□□ 0.05
VARS2-213ENST00000625423 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
VARS2-213ENST00000625423 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
VARS2-213ENST00000625423 ABCA8O94911 1581 aa15.38■□□□□ 0.05
VARS2-213ENST00000625423 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
VARS2-213ENST00000625423 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
VARS2-213ENST00000625423 SHANK2Q9UPX8 1470 aa15.36■□□□□ 0.05
VARS2-213ENST00000625423 KDM5CP41229 1560 aa15.36■□□□□ 0.05
VARS2-213ENST00000625423 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
VARS2-213ENST00000625423 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
VARS2-213ENST00000625423 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
VARS2-213ENST00000625423 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
VARS2-213ENST00000625423 KIF15Q9NS87 1388 aa15.34■□□□□ 0.05
VARS2-213ENST00000625423 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.04
VARS2-213ENST00000625423 B4GALNT3Q6L9W6 998 aa15.33■□□□□ 0.04
VARS2-213ENST00000625423 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
VARS2-213ENST00000625423 MSH5O43196 834 aa15.31■□□□□ 0.04
VARS2-213ENST00000625423 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
VARS2-213ENST00000625423 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
VARS2-213ENST00000625423 ROCK2O75116 1388 aaKnown RBP15.3■□□□□ 0.04
VARS2-213ENST00000625423 ARHGEF12Q9NZN5 1544 aa15.3■□□□□ 0.04
VARS2-213ENST00000625423 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
VARS2-213ENST00000625423 PTPRGP23470 1445 aa15.29■□□□□ 0.04
VARS2-213ENST00000625423 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
VARS2-213ENST00000625423 TMC1Q8TDI8 760 aa15.28■□□□□ 0.04
VARS2-213ENST00000625423 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
VARS2-213ENST00000625423 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
VARS2-213ENST00000625423 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
VARS2-213ENST00000625423 ARHGEF5Q12774 1597 aa15.27■□□□□ 0.03
VARS2-213ENST00000625423 CCDC141Q6ZP82 1450 aa15.25■□□□□ 0.03
VARS2-213ENST00000625423 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms