RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
LINC00963-220ENST00000625171 KIF14Q15058 1648 aa17.8■□□□□ 0.44
LINC00963-220ENST00000625171 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
LINC00963-220ENST00000625171 HECW2Q9P2P5 1572 aa17.75■□□□□ 0.43
LINC00963-220ENST00000625171 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
LINC00963-220ENST00000625171 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
LINC00963-220ENST00000625171 HRCP23327 699 aa17.73■□□□□ 0.43
LINC00963-220ENST00000625171 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
LINC00963-220ENST00000625171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.432e-6■■■□□ 16.6
LINC00963-220ENST00000625171 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
LINC00963-220ENST00000625171 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
LINC00963-220ENST00000625171 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
LINC00963-220ENST00000625171 PLCH2O75038 1416 aa17.7■□□□□ 0.42
LINC00963-220ENST00000625171 CDC42BPAQ5VT25 1732 aa17.67■□□□□ 0.42
LINC00963-220ENST00000625171 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
LINC00963-220ENST00000625171 AKNAQ7Z591 1439 aa17.65■□□□□ 0.42
LINC00963-220ENST00000625171 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
LINC00963-220ENST00000625171 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
LINC00963-220ENST00000625171 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
LINC00963-220ENST00000625171 CD109Q6YHK3 1445 aa17.64■□□□□ 0.42
LINC00963-220ENST00000625171 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
LINC00963-220ENST00000625171 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
LINC00963-220ENST00000625171 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
LINC00963-220ENST00000625171 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
LINC00963-220ENST00000625171 TTC37Q6PGP7 1564 aa17.63■□□□□ 0.41
LINC00963-220ENST00000625171 PTPRKQ15262 1439 aa17.63■□□□□ 0.41
LINC00963-220ENST00000625171 EFCAB2Q5VUJ9 269 aa17.62■□□□□ 0.41
LINC00963-220ENST00000625171 CDC42BPBQ9Y5S2 1711 aa17.61■□□□□ 0.41
LINC00963-220ENST00000625171 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
LINC00963-220ENST00000625171 HFM1A2PYH4 1435 aa17.61■□□□□ 0.41
LINC00963-220ENST00000625171 ABCC5O15440 1437 aa17.61■□□□□ 0.41
LINC00963-220ENST00000625171 DAPK1P53355 1430 aa17.61■□□□□ 0.41
LINC00963-220ENST00000625171 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
LINC00963-220ENST00000625171 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
LINC00963-220ENST00000625171 MBD5Q9P267 1494 aa17.6■□□□□ 0.41
LINC00963-220ENST00000625171 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
LINC00963-220ENST00000625171 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
LINC00963-220ENST00000625171 SHANK2Q9UPX8 1470 aa17.57■□□□□ 0.4
LINC00963-220ENST00000625171 ITGAEP38570 1179 aa17.56■□□□□ 0.4
LINC00963-220ENST00000625171 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
LINC00963-220ENST00000625171 ADGRL2O95490 1459 aa17.56■□□□□ 0.4
LINC00963-220ENST00000625171 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
LINC00963-220ENST00000625171 NAIPQ13075 1403 aa17.55■□□□□ 0.4
LINC00963-220ENST00000625171 ZNF777Q9ULD5 760 aaPredicted RBP17.54■□□□□ 0.4
LINC00963-220ENST00000625171 CLSPNQ9HAW4 1339 aa17.53■□□□□ 0.4
LINC00963-220ENST00000625171 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
LINC00963-220ENST00000625171 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
LINC00963-220ENST00000625171 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
LINC00963-220ENST00000625171 NCOA1Q15788 1441 aa17.52■□□□□ 0.4
LINC00963-220ENST00000625171 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
LINC00963-220ENST00000625171 FBXO41Q8TF61 875 aa17.51■□□□□ 0.39
LINC00963-220ENST00000625171 FANCAO15360 1455 aa17.5■□□□□ 0.39
LINC00963-220ENST00000625171 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
LINC00963-220ENST00000625171 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
LINC00963-220ENST00000625171 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
LINC00963-220ENST00000625171 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
LINC00963-220ENST00000625171 ABCC1P33527 1531 aa17.48■□□□□ 0.39
LINC00963-220ENST00000625171 NEO1Q92859 1461 aa17.48■□□□□ 0.39
LINC00963-220ENST00000625171 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
LINC00963-220ENST00000625171 RTEL1-TNFRSF6BF6WH68 1400 aa17.47■□□□□ 0.39
LINC00963-220ENST00000625171 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
LINC00963-220ENST00000625171 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
LINC00963-220ENST00000625171 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
LINC00963-220ENST00000625171 PTPRMP28827 1452 aa17.45■□□□□ 0.38
LINC00963-220ENST00000625171 SYCP2Q9BX26 1530 aa17.45■□□□□ 0.38
LINC00963-220ENST00000625171 GCC2Q8IWJ2 1684 aa17.45■□□□□ 0.38
LINC00963-220ENST00000625171 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
LINC00963-220ENST00000625171 CCER1Q8TC90 406 aaPredicted RBP17.44■□□□□ 0.38
LINC00963-220ENST00000625171 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
LINC00963-220ENST00000625171 ADAMTSL3P82987 1691 aa17.44■□□□□ 0.38
LINC00963-220ENST00000625171 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
LINC00963-220ENST00000625171 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
LINC00963-220ENST00000625171 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
LINC00963-220ENST00000625171 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
LINC00963-220ENST00000625171 PLXNC1O60486 1568 aa17.38■□□□□ 0.37
LINC00963-220ENST00000625171 ANKRD50Q9ULJ7 1429 aa17.37■□□□□ 0.37
LINC00963-220ENST00000625171 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
LINC00963-220ENST00000625171 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
LINC00963-220ENST00000625171 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
LINC00963-220ENST00000625171 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
LINC00963-220ENST00000625171 SPAG9O60271 1321 aaKnown RBP17.35■□□□□ 0.37
LINC00963-220ENST00000625171 AFAP1Q8N556 730 aa17.34■□□□□ 0.37
LINC00963-220ENST00000625171 LMTK3Q96Q04 1460 aa17.34■□□□□ 0.37
LINC00963-220ENST00000625171 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
LINC00963-220ENST00000625171 KDM5CP41229 1560 aa17.33■□□□□ 0.37
LINC00963-220ENST00000625171 FRMPD1Q5SYB0 1578 aa17.33■□□□□ 0.37
LINC00963-220ENST00000625171 POGZQ7Z3K3 1410 aa17.33■□□□□ 0.36
LINC00963-220ENST00000625171 DUOX2Q9NRD8 1548 aa17.32■□□□□ 0.36
LINC00963-220ENST00000625171 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
LINC00963-220ENST00000625171 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
LINC00963-220ENST00000625171 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
LINC00963-220ENST00000625171 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
LINC00963-220ENST00000625171 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
LINC00963-220ENST00000625171 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
LINC00963-220ENST00000625171 ZFYVE16Q7Z3T8 1539 aa17.29■□□□□ 0.36
LINC00963-220ENST00000625171 ATP7AQ04656 1500 aa17.28■□□□□ 0.36
LINC00963-220ENST00000625171 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
LINC00963-220ENST00000625171 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
LINC00963-220ENST00000625171 DHX29Q7Z478 1369 aaKnown RBP17.27■□□□□ 0.35
LINC00963-220ENST00000625171 MPHOSPH9Q99550 1183 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms