RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 PLCH2O75038 1416 aa13.75□□□□□ -0.21
AC002540.1-201ENST00000625023 CEP162Q5TB80 1403 aa13.74□□□□□ -0.21
AC002540.1-201ENST00000625023 FANCAO15360 1455 aa13.73□□□□□ -0.21
AC002540.1-201ENST00000625023 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
AC002540.1-201ENST00000625023 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
AC002540.1-201ENST00000625023 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
AC002540.1-201ENST00000625023 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
AC002540.1-201ENST00000625023 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
AC002540.1-201ENST00000625023 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
AC002540.1-201ENST00000625023 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
AC002540.1-201ENST00000625023 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
AC002540.1-201ENST00000625023 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
AC002540.1-201ENST00000625023 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
AC002540.1-201ENST00000625023 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
AC002540.1-201ENST00000625023 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
AC002540.1-201ENST00000625023 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
AC002540.1-201ENST00000625023 CDC42BPAQ5VT25 1732 aa13.65□□□□□ -0.22
AC002540.1-201ENST00000625023 POGZQ7Z3K3 1410 aa13.65□□□□□ -0.22
AC002540.1-201ENST00000625023 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
AC002540.1-201ENST00000625023 EFCAB2Q5VUJ9 269 aa13.64□□□□□ -0.23
AC002540.1-201ENST00000625023 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
AC002540.1-201ENST00000625023 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
AC002540.1-201ENST00000625023 MAGI2Q86UL8 1455 aa13.62□□□□□ -0.23
AC002540.1-201ENST00000625023 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
AC002540.1-201ENST00000625023 KDM5CP41229 1560 aa13.62□□□□□ -0.23
AC002540.1-201ENST00000625023 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
AC002540.1-201ENST00000625023 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
AC002540.1-201ENST00000625023 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
AC002540.1-201ENST00000625023 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
AC002540.1-201ENST00000625023 YEATS2Q9ULM3 1422 aa13.59□□□□□ -0.23
AC002540.1-201ENST00000625023 ABCC1P33527 1531 aa13.59□□□□□ -0.23
AC002540.1-201ENST00000625023 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
AC002540.1-201ENST00000625023 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
AC002540.1-201ENST00000625023 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
AC002540.1-201ENST00000625023 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
AC002540.1-201ENST00000625023 ZFYVE16Q7Z3T8 1539 aa13.56□□□□□ -0.24
AC002540.1-201ENST00000625023 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
AC002540.1-201ENST00000625023 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
AC002540.1-201ENST00000625023 SAMD9LQ8IVG5 1584 aa13.56□□□□□ -0.24
AC002540.1-201ENST00000625023 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
AC002540.1-201ENST00000625023 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
AC002540.1-201ENST00000625023 MTUS2Q5JR59 1369 aa13.55□□□□□ -0.24
AC002540.1-201ENST00000625023 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
AC002540.1-201ENST00000625023 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
AC002540.1-201ENST00000625023 AFAP1Q8N556 730 aa13.55□□□□□ -0.24
AC002540.1-201ENST00000625023 KIAA1107Q9UPP5 1409 aa13.53□□□□□ -0.24
AC002540.1-201ENST00000625023 ATP10AO60312 1499 aa13.52□□□□□ -0.24
AC002540.1-201ENST00000625023 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.24
AC002540.1-201ENST00000625023 REREQ9P2R6 1566 aa13.52□□□□□ -0.24
AC002540.1-201ENST00000625023 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
AC002540.1-201ENST00000625023 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
AC002540.1-201ENST00000625023 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
AC002540.1-201ENST00000625023 LRRC9Q6ZRR7 1453 aa13.51□□□□□ -0.25
AC002540.1-201ENST00000625023 DIP2CQ9Y2E4 1556 aa13.51□□□□□ -0.25
AC002540.1-201ENST00000625023 NCOA2Q15596 1464 aa13.5□□□□□ -0.25
AC002540.1-201ENST00000625023 MBD5Q9P267 1494 aa13.5□□□□□ -0.25
AC002540.1-201ENST00000625023 SUPT6HQ7KZ85 1726 aaKnown RBP13.49□□□□□ -0.25
AC002540.1-201ENST00000625023 ABCA6Q8N139 1617 aa13.49□□□□□ -0.25
AC002540.1-201ENST00000625023 MADDQ8WXG6 1647 aa13.49□□□□□ -0.25
AC002540.1-201ENST00000625023 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
AC002540.1-201ENST00000625023 PTPRMP28827 1452 aa13.49□□□□□ -0.25
AC002540.1-201ENST00000625023 C9orf84Q5VXU9 1444 aa13.49□□□□□ -0.25
AC002540.1-201ENST00000625023 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
AC002540.1-201ENST00000625023 CFDP1Q9UEE9 299 aaPredicted RBP13.48□□□□□ -0.25
AC002540.1-201ENST00000625023 KANK4Q5T7N3 995 aaPredicted RBP13.47□□□□□ -0.25
AC002540.1-201ENST00000625023 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.25
AC002540.1-201ENST00000625023 AGLP35573 1532 aa13.46□□□□□ -0.25
AC002540.1-201ENST00000625023 ZNF644Q9H582 1327 aaPredicted RBP13.45□□□□□ -0.26
AC002540.1-201ENST00000625023 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
AC002540.1-201ENST00000625023 HNRNPMP52272 730 aaKnown RBP eCLIP13.44□□□□□ -0.26
AC002540.1-201ENST00000625023 ARID4BQ4LE39 1312 aaPredicted RBP13.44□□□□□ -0.26
AC002540.1-201ENST00000625023 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
AC002540.1-201ENST00000625023 PLXNC1O60486 1568 aa13.42□□□□□ -0.26
AC002540.1-201ENST00000625023 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
AC002540.1-201ENST00000625023 RIMS1Q86UR5 1692 aaKnown RBP13.42□□□□□ -0.26
AC002540.1-201ENST00000625023 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
AC002540.1-201ENST00000625023 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
AC002540.1-201ENST00000625023 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.26
AC002540.1-201ENST00000625023 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
AC002540.1-201ENST00000625023 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
AC002540.1-201ENST00000625023 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
AC002540.1-201ENST00000625023 MYOM3Q5VTT5 1437 aa13.38□□□□□ -0.27
AC002540.1-201ENST00000625023 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
AC002540.1-201ENST00000625023 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
AC002540.1-201ENST00000625023 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
AC002540.1-201ENST00000625023 A2MP01023 1474 aa13.36□□□□□ -0.27
AC002540.1-201ENST00000625023 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
AC002540.1-201ENST00000625023 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
AC002540.1-201ENST00000625023 MLECQ14165 292 aa13.35□□□□□ -0.27
AC002540.1-201ENST00000625023 MAST1Q9Y2H9 1570 aa13.34□□□□□ -0.27
AC002540.1-201ENST00000625023 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
AC002540.1-201ENST00000625023 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
AC002540.1-201ENST00000625023 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
AC002540.1-201ENST00000625023 ZBTB22O15209 634 aa13.32□□□□□ -0.28
AC002540.1-201ENST00000625023 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
AC002540.1-201ENST00000625023 C3P01024 1663 aa13.31□□□□□ -0.28
AC002540.1-201ENST00000625023 TCOF1Q13428 1488 aaKnown RBP13.31□□□□□ -0.28
AC002540.1-201ENST00000625023 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
AC002540.1-201ENST00000625023 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
AC002540.1-201ENST00000625023 MROH2AA6NES4 1674 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms