RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.83■■□□□ 1.732e-39■□□□□ 9.9
PCF11-207ENST00000624931 KCNH8Q96L42 1107 aa25.83■■□□□ 1.72
PCF11-207ENST00000624931 ZNF644Q9H582 1327 aaPredicted RBP25.82■■□□□ 1.72
PCF11-207ENST00000624931 PTPRKQ15262 1439 aa25.81■■□□□ 1.72
PCF11-207ENST00000624931 CYB5RLQ6IPT4 315 aa25.79■■□□□ 1.72
PCF11-207ENST00000624931 WDR7Q9Y4E6 1490 aa25.79■■□□□ 1.72
PCF11-207ENST00000624931 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
PCF11-207ENST00000624931 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
PCF11-207ENST00000624931 CFDP1Q9UEE9 299 aaPredicted RBP25.77■■□□□ 1.72
PCF11-207ENST00000624931 ASXL2Q76L83 1435 aa25.77■■□□□ 1.72
PCF11-207ENST00000624931 CLSPNQ9HAW4 1339 aa25.77■■□□□ 1.72
PCF11-207ENST00000624931 CDC42BPBQ9Y5S2 1711 aa25.76■■□□□ 1.71
PCF11-207ENST00000624931 ZNF777Q9ULD5 760 aaPredicted RBP25.74■■□□□ 1.71
PCF11-207ENST00000624931 MYO5CQ9NQX4 1742 aa25.73■■□□□ 1.71
PCF11-207ENST00000624931 DNMT1P26358 1616 aaKnown RBP25.7■■□□□ 1.71
PCF11-207ENST00000624931 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
PCF11-207ENST00000624931 SAMD9LQ8IVG5 1584 aa25.68■■□□□ 1.7
PCF11-207ENST00000624931 ARHGAP5Q13017 1502 aa25.68■■□□□ 1.7
PCF11-207ENST00000624931 DAPK1P53355 1430 aa25.67■■□□□ 1.7
PCF11-207ENST00000624931 ABCC5O15440 1437 aa25.66■■□□□ 1.7
PCF11-207ENST00000624931 CHIC2Q9UKJ5 165 aa25.66■■□□□ 1.7
PCF11-207ENST00000624931 RAB3GAP2Q9H2M9 1393 aa25.64■■□□□ 1.7
PCF11-207ENST00000624931 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
PCF11-207ENST00000624931 ABCA9Q8IUA7 1624 aa25.63■■□□□ 1.69
PCF11-207ENST00000624931 CROCC2H7BZ55 1655 aa25.62■■□□□ 1.69
PCF11-207ENST00000624931 PLCH2O75038 1416 aa25.61■■□□□ 1.69
PCF11-207ENST00000624931 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.69
PCF11-207ENST00000624931 HFM1A2PYH4 1435 aa25.57■■□□□ 1.68
PCF11-207ENST00000624931 MAPKBP1O60336 1514 aa25.57■■□□□ 1.68
PCF11-207ENST00000624931 RRP7BPQ9NSQ0 103 aa25.57■■□□□ 1.68
PCF11-207ENST00000624931 NAIPQ13075 1403 aa25.56■■□□□ 1.68
PCF11-207ENST00000624931 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
PCF11-207ENST00000624931 HNRNPMP52272 730 aaKnown RBP eCLIP25.55■■□□□ 1.68
PCF11-207ENST00000624931 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
PCF11-207ENST00000624931 MIER1Q8N108 512 aa25.54■■□□□ 1.68
PCF11-207ENST00000624931 AKNAQ7Z591 1439 aa25.53■■□□□ 1.68
PCF11-207ENST00000624931 ADGBQ8N7X0 1667 aa25.53■■□□□ 1.68
PCF11-207ENST00000624931 ARHGEF5Q12774 1597 aa25.53■■□□□ 1.68
PCF11-207ENST00000624931 KDM6BO15054 1643 aa25.52■■□□□ 1.68
PCF11-207ENST00000624931 ARAP3Q8WWN8 1544 aa25.51■■□□□ 1.67
PCF11-207ENST00000624931 ARHGEF12Q9NZN5 1544 aa25.51■■□□□ 1.67
PCF11-207ENST00000624931 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
PCF11-207ENST00000624931 ABCC1P33527 1531 aa25.5■■□□□ 1.67
PCF11-207ENST00000624931 CCDC141Q6ZP82 1450 aa25.48■■□□□ 1.67
PCF11-207ENST00000624931 EFCAB2Q5VUJ9 269 aa25.48■■□□□ 1.67
PCF11-207ENST00000624931 ROCK1Q13464 1354 aa25.47■■□□□ 1.67
PCF11-207ENST00000624931 C9orf84Q5VXU9 1444 aa25.47■■□□□ 1.67
PCF11-207ENST00000624931 SHANK2Q9UPX8 1470 aa25.47■■□□□ 1.67
PCF11-207ENST00000624931 FANCAO15360 1455 aa25.46■■□□□ 1.67
PCF11-207ENST00000624931 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
PCF11-207ENST00000624931 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
PCF11-207ENST00000624931 KIAA1107Q9UPP5 1409 aa25.43■■□□□ 1.66
PCF11-207ENST00000624931 CD109Q6YHK3 1445 aa25.43■■□□□ 1.66
PCF11-207ENST00000624931 NCOA1Q15788 1441 aa25.41■■□□□ 1.66
PCF11-207ENST00000624931 TRAPPC8Q9Y2L5 1435 aa25.4■■□□□ 1.66
PCF11-207ENST00000624931 DIP2BQ9P265 1576 aa25.4■■□□□ 1.66
PCF11-207ENST00000624931 YTHDC1Q96MU7 727 aaKnown RBP25.4■■□□□ 1.66
PCF11-207ENST00000624931 MAP3K4Q9Y6R4 1608 aa25.38■■□□□ 1.65
PCF11-207ENST00000624931 ANKRD30AQ9BXX3 1397 aa25.37■■□□□ 1.65
PCF11-207ENST00000624931 MAST1Q9Y2H9 1570 aa25.36■■□□□ 1.65
PCF11-207ENST00000624931 TSPY4P0CV99 314 aa25.36■■□□□ 1.65
PCF11-207ENST00000624931 TSPY10P0CW01 314 aa25.36■■□□□ 1.65
PCF11-207ENST00000624931 ADGRL1O94910 1474 aa25.36■■□□□ 1.65
PCF11-207ENST00000624931 GLI2P10070 1586 aa25.36■■□□□ 1.65
PCF11-207ENST00000624931 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
PCF11-207ENST00000624931 SCAPERQ9BY12 1400 aa25.32■■□□□ 1.64
PCF11-207ENST00000624931 RSPH4AQ5TD94 716 aa25.32■■□□□ 1.64
PCF11-207ENST00000624931 KIF15Q9NS87 1388 aa25.3■■□□□ 1.64
PCF11-207ENST00000624931 FAM69CQ0P6D2 419 aa25.3■■□□□ 1.64
PCF11-207ENST00000624931 AFAP1Q8N556 730 aa25.29■■□□□ 1.64
PCF11-207ENST00000624931 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
PCF11-207ENST00000624931 ANKRD50Q9ULJ7 1429 aa25.26■■□□□ 1.63
PCF11-207ENST00000624931 ZFYVE16Q7Z3T8 1539 aa25.26■■□□□ 1.63
PCF11-207ENST00000624931 KIF13AQ9H1H9 1805 aa25.26■■□□□ 1.63
PCF11-207ENST00000624931 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
PCF11-207ENST00000624931 TRIM52Q96A61 297 aa25.26■■□□□ 1.63
PCF11-207ENST00000624931 PPRC1Q5VV67 1664 aaKnown RBP25.24■■□□□ 1.63
PCF11-207ENST00000624931 INO80Q9ULG1 1556 aaPredicted RBP25.23■■□□□ 1.63
PCF11-207ENST00000624931 NEO1Q92859 1461 aa25.22■■□□□ 1.63
PCF11-207ENST00000624931 SPAG9O60271 1321 aaKnown RBP25.22■■□□□ 1.63
PCF11-207ENST00000624931 DENND4BO75064 1496 aaPredicted RBP25.21■■□□□ 1.63
PCF11-207ENST00000624931 ATP7AQ04656 1500 aa25.2■■□□□ 1.62
PCF11-207ENST00000624931 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
PCF11-207ENST00000624931 POGZQ7Z3K3 1410 aa25.2■■□□□ 1.62
PCF11-207ENST00000624931 ZNF518AQ6AHZ1 1483 aa25.17■■□□□ 1.62
PCF11-207ENST00000624931 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
PCF11-207ENST00000624931 DUOX2Q9NRD8 1548 aa25.15■■□□□ 1.62
PCF11-207ENST00000624931 KDM5CP41229 1560 aa25.15■■□□□ 1.62
PCF11-207ENST00000624931 PZPP20742 1482 aa25.15■■□□□ 1.62
PCF11-207ENST00000624931 KIDINS220Q9ULH0 1771 aa25.14■■□□□ 1.62
PCF11-207ENST00000624931 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
PCF11-207ENST00000624931 RICTORQ6R327 1708 aa25.11■■□□□ 1.61
PCF11-207ENST00000624931 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
PCF11-207ENST00000624931 RAPGEF3O95398 923 aa25.1■■□□□ 1.61
PCF11-207ENST00000624931 SIN3AQ96ST3 1273 aa25.1■■□□□ 1.61
PCF11-207ENST00000624931 FRMPD1Q5SYB0 1578 aa25.09■■□□□ 1.61
PCF11-207ENST00000624931 HECW2Q9P2P5 1572 aa25.09■■□□□ 1.61
PCF11-207ENST00000624931 FOXD1Q16676 465 aa25.09■■□□□ 1.61
PCF11-207ENST00000624931 ERBINQ96RT1 1412 aa25.08■■□□□ 1.61
PCF11-207ENST00000624931 UNC13BO14795 1591 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms