RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-219ENST00000624390 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
LINC00963-219ENST00000624390 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
LINC00963-219ENST00000624390 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
LINC00963-219ENST00000624390 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
LINC00963-219ENST00000624390 KDM4FA0A1W2PPD8 638 aa13.07□□□□□ -0.32
LINC00963-219ENST00000624390 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00963-219ENST00000624390 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
LINC00963-219ENST00000624390 EHBP1L1Q8N3D4 1523 aa13.05□□□□□ -0.32
LINC00963-219ENST00000624390 CFAP74Q9C0B2 1584 aa13.05□□□□□ -0.32
LINC00963-219ENST00000624390 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
LINC00963-219ENST00000624390 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-219ENST00000624390 POGZQ7Z3K3 1410 aa13.04□□□□□ -0.32
LINC00963-219ENST00000624390 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
LINC00963-219ENST00000624390 MYO5CQ9NQX4 1742 aa13.03□□□□□ -0.32
LINC00963-219ENST00000624390 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
LINC00963-219ENST00000624390 TRAPPC8Q9Y2L5 1435 aa13.01□□□□□ -0.33
LINC00963-219ENST00000624390 MAP3K1Q13233 1512 aa13□□□□□ -0.33
LINC00963-219ENST00000624390 YEATS2Q9ULM3 1422 aa13□□□□□ -0.33
LINC00963-219ENST00000624390 MLECQ14165 292 aa13□□□□□ -0.33
LINC00963-219ENST00000624390 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
LINC00963-219ENST00000624390 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
LINC00963-219ENST00000624390 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
LINC00963-219ENST00000624390 SPAG9O60271 1321 aaKnown RBP12.99□□□□□ -0.33
LINC00963-219ENST00000624390 PPARGC1BQ86YN6 1023 aaKnown RBP12.99□□□□□ -0.33
LINC00963-219ENST00000624390 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
LINC00963-219ENST00000624390 MAGI2Q86UL8 1455 aa12.98□□□□□ -0.33
LINC00963-219ENST00000624390 CDC42BPBQ9Y5S2 1711 aa12.98□□□□□ -0.33
LINC00963-219ENST00000624390 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
LINC00963-219ENST00000624390 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
LINC00963-219ENST00000624390 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
LINC00963-219ENST00000624390 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.34
LINC00963-219ENST00000624390 ABCC1P33527 1531 aa12.95□□□□□ -0.34
LINC00963-219ENST00000624390 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
LINC00963-219ENST00000624390 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
LINC00963-219ENST00000624390 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
LINC00963-219ENST00000624390 RICTORQ6R327 1708 aa12.95□□□□□ -0.34
LINC00963-219ENST00000624390 ATP10AO60312 1499 aa12.95□□□□□ -0.34
LINC00963-219ENST00000624390 ZMYM4Q5VZL5 1548 aa12.94□□□□□ -0.34
LINC00963-219ENST00000624390 SYCP2Q9BX26 1530 aa12.94□□□□□ -0.34
LINC00963-219ENST00000624390 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
LINC00963-219ENST00000624390 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
LINC00963-219ENST00000624390 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
LINC00963-219ENST00000624390 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
LINC00963-219ENST00000624390 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
LINC00963-219ENST00000624390 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
LINC00963-219ENST00000624390 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
LINC00963-219ENST00000624390 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
LINC00963-219ENST00000624390 ESF1Q9H501 851 aaKnown RBP12.9□□□□□ -0.34
LINC00963-219ENST00000624390 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
LINC00963-219ENST00000624390 KDM5CP41229 1560 aa12.9□□□□□ -0.35
LINC00963-219ENST00000624390 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
LINC00963-219ENST00000624390 FAM50AQ14320 339 aaKnown RBP12.89□□□□□ -0.35
LINC00963-219ENST00000624390 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
LINC00963-219ENST00000624390 HECW2Q9P2P5 1572 aa12.87□□□□□ -0.35
LINC00963-219ENST00000624390 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
LINC00963-219ENST00000624390 GGT6Q6P531 493 aa12.86□□□□□ -0.35
LINC00963-219ENST00000624390 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
LINC00963-219ENST00000624390 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
LINC00963-219ENST00000624390 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
LINC00963-219ENST00000624390 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
LINC00963-219ENST00000624390 ATP7AQ04656 1500 aa12.83□□□□□ -0.35
LINC00963-219ENST00000624390 KIF3BO15066 747 aa12.83□□□□□ -0.36
LINC00963-219ENST00000624390 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
LINC00963-219ENST00000624390 A2MP01023 1474 aa12.83□□□□□ -0.36
LINC00963-219ENST00000624390 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
LINC00963-219ENST00000624390 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
LINC00963-219ENST00000624390 RRP7BPQ9NSQ0 103 aa12.82□□□□□ -0.36
LINC00963-219ENST00000624390 PTPRMP28827 1452 aa12.82□□□□□ -0.36
LINC00963-219ENST00000624390 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
LINC00963-219ENST00000624390 ITGAEP38570 1179 aa12.81□□□□□ -0.36
LINC00963-219ENST00000624390 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
LINC00963-219ENST00000624390 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
LINC00963-219ENST00000624390 ABCC5O15440 1437 aa12.79□□□□□ -0.36
LINC00963-219ENST00000624390 ARHGEF5Q12774 1597 aa12.79□□□□□ -0.36
LINC00963-219ENST00000624390 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
LINC00963-219ENST00000624390 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
LINC00963-219ENST00000624390 AGLP35573 1532 aa12.78□□□□□ -0.36
LINC00963-219ENST00000624390 MADDQ8WXG6 1647 aa12.78□□□□□ -0.36
LINC00963-219ENST00000624390 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
LINC00963-219ENST00000624390 REREQ9P2R6 1566 aa12.77□□□□□ -0.36
LINC00963-219ENST00000624390 INO80Q9ULG1 1556 aaPredicted RBP12.77□□□□□ -0.36
LINC00963-219ENST00000624390 DAPK1P53355 1430 aa12.77□□□□□ -0.37
LINC00963-219ENST00000624390 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
LINC00963-219ENST00000624390 ANKRD30AQ9BXX3 1397 aa12.75□□□□□ -0.37
LINC00963-219ENST00000624390 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
LINC00963-219ENST00000624390 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
LINC00963-219ENST00000624390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00963-219ENST00000624390 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
LINC00963-219ENST00000624390 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
LINC00963-219ENST00000624390 CNTLNQ9NXG0 1405 aa12.72□□□□□ -0.37
LINC00963-219ENST00000624390 PLXNC1O60486 1568 aa12.71□□□□□ -0.37
LINC00963-219ENST00000624390 SHANK2Q9UPX8 1470 aa12.71□□□□□ -0.38
LINC00963-219ENST00000624390 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
LINC00963-219ENST00000624390 MAST1Q9Y2H9 1570 aa12.7□□□□□ -0.38
LINC00963-219ENST00000624390 HSPA2P54652 639 aa12.7□□□□□ -0.38
LINC00963-219ENST00000624390 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
LINC00963-219ENST00000624390 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
LINC00963-219ENST00000624390 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
LINC00963-219ENST00000624390 DUOX2Q9NRD8 1548 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms