RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
SND1-IT1-201ENST00000623342 ABCC5O15440 1437 aa11.83□□□□□ -0.52
SND1-IT1-201ENST00000623342 KDM5BQ9UGL1 1544 aa11.82□□□□□ -0.52
SND1-IT1-201ENST00000623342 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
SND1-IT1-201ENST00000623342 ADCY10Q96PN6 1610 aa11.81□□□□□ -0.52
SND1-IT1-201ENST00000623342 MPHOSPH9Q99550 1183 aa11.81□□□□□ -0.52
SND1-IT1-201ENST00000623342 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
SND1-IT1-201ENST00000623342 ZNF644Q9H582 1327 aaPredicted RBP11.8□□□□□ -0.52
SND1-IT1-201ENST00000623342 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
SND1-IT1-201ENST00000623342 CHD1O14646 1710 aa11.8□□□□□ -0.52
SND1-IT1-201ENST00000623342 CAMSAP2Q08AD1 1489 aa11.78□□□□□ -0.52
SND1-IT1-201ENST00000623342 GPATCH8Q9UKJ3 1502 aaKnown RBP11.78□□□□□ -0.52
SND1-IT1-201ENST00000623342 CFDP1Q9UEE9 299 aaPredicted RBP11.78□□□□□ -0.52
SND1-IT1-201ENST00000623342 KIF14Q15058 1648 aa11.77□□□□□ -0.52
SND1-IT1-201ENST00000623342 ABCA8O94911 1581 aa11.77□□□□□ -0.52
SND1-IT1-201ENST00000623342 PHF23Q9BUL5 403 aaPredicted RBP11.77□□□□□ -0.53
SND1-IT1-201ENST00000623342 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
SND1-IT1-201ENST00000623342 ADGBQ8N7X0 1667 aa11.75□□□□□ -0.53
SND1-IT1-201ENST00000623342 ANKRD30BQ9BXX2 1392 aa11.74□□□□□ -0.53
SND1-IT1-201ENST00000623342 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
SND1-IT1-201ENST00000623342 ANP32CO43423 234 aa11.74□□□□□ -0.53
SND1-IT1-201ENST00000623342 ERCC6L2Q5T890 1561 aa11.74□□□□□ -0.53
SND1-IT1-201ENST00000623342 CROCC2H7BZ55 1655 aa11.73□□□□□ -0.53
SND1-IT1-201ENST00000623342 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
SND1-IT1-201ENST00000623342 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
SND1-IT1-201ENST00000623342 ATP10BO94823 1461 aa11.73□□□□□ -0.53
SND1-IT1-201ENST00000623342 ADGRL2O95490 1459 aa11.73□□□□□ -0.53
SND1-IT1-201ENST00000623342 FOXD1Q16676 465 aa11.72□□□□□ -0.53
SND1-IT1-201ENST00000623342 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
SND1-IT1-201ENST00000623342 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
SND1-IT1-201ENST00000623342 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.53
SND1-IT1-201ENST00000623342 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
SND1-IT1-201ENST00000623342 ABCC10Q5T3U5 1492 aa11.71□□□□□ -0.53
SND1-IT1-201ENST00000623342 CDC42BPAQ5VT25 1732 aa11.7□□□□□ -0.54
SND1-IT1-201ENST00000623342 ANKRD30AQ9BXX3 1397 aa11.7□□□□□ -0.54
SND1-IT1-201ENST00000623342 HSPA5P11021 654 aaKnown RBP11.69□□□□□ -0.54
SND1-IT1-201ENST00000623342 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
SND1-IT1-201ENST00000623342 PZPP20742 1482 aa11.69□□□□□ -0.54
SND1-IT1-201ENST00000623342 PTPRGP23470 1445 aa11.69□□□□□ -0.54
SND1-IT1-201ENST00000623342 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
SND1-IT1-201ENST00000623342 TEX14Q8IWB6 1497 aa11.68□□□□□ -0.54
SND1-IT1-201ENST00000623342 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
SND1-IT1-201ENST00000623342 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
SND1-IT1-201ENST00000623342 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
SND1-IT1-201ENST00000623342 KIAA1107Q9UPP5 1409 aa11.65□□□□□ -0.54
SND1-IT1-201ENST00000623342 C9orf84Q5VXU9 1444 aa11.65□□□□□ -0.54
SND1-IT1-201ENST00000623342 SUPT16HQ9Y5B9 1047 aaKnown RBP11.65□□□□□ -0.54
SND1-IT1-201ENST00000623342 SHROOM2Q13796 1616 aa11.63□□□□□ -0.55
SND1-IT1-201ENST00000623342 NBPF8Q3BBV2 869 aa11.63□□□□□ -0.55
SND1-IT1-201ENST00000623342 ARHGEF5Q12774 1597 aa11.63□□□□□ -0.55
SND1-IT1-201ENST00000623342 TSPY4P0CV99 314 aa11.62□□□□□ -0.55
SND1-IT1-201ENST00000623342 TSPY10P0CW01 314 aa11.62□□□□□ -0.55
SND1-IT1-201ENST00000623342 PKD2Q13563 968 aa11.61□□□□□ -0.55
SND1-IT1-201ENST00000623342 PREX2Q70Z35 1606 aa11.61□□□□□ -0.55
SND1-IT1-201ENST00000623342 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
SND1-IT1-201ENST00000623342 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
SND1-IT1-201ENST00000623342 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
SND1-IT1-201ENST00000623342 CCDC7Q96M83 1385 aa11.6□□□□□ -0.55
SND1-IT1-201ENST00000623342 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
SND1-IT1-201ENST00000623342 NUP155O75694 1391 aa11.59□□□□□ -0.55
SND1-IT1-201ENST00000623342 SPATA31E1Q6ZUB1 1445 aa11.59□□□□□ -0.55
SND1-IT1-201ENST00000623342 HNRNPMP52272 730 aaKnown RBP eCLIP11.59□□□□□ -0.55
SND1-IT1-201ENST00000623342 SAMD9LQ8IVG5 1584 aa11.59□□□□□ -0.55
SND1-IT1-201ENST00000623342 CCDC141Q6ZP82 1450 aa11.59□□□□□ -0.55
SND1-IT1-201ENST00000623342 KIF15Q9NS87 1388 aa11.58□□□□□ -0.56
SND1-IT1-201ENST00000623342 RSPH4AQ5TD94 716 aa11.58□□□□□ -0.56
SND1-IT1-201ENST00000623342 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
SND1-IT1-201ENST00000623342 POLR1AO95602 1720 aaPredicted RBP11.57□□□□□ -0.56
SND1-IT1-201ENST00000623342 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
SND1-IT1-201ENST00000623342 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
SND1-IT1-201ENST00000623342 TTC37Q6PGP7 1564 aa11.55□□□□□ -0.56
SND1-IT1-201ENST00000623342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
SND1-IT1-201ENST00000623342 ARHGAP5Q13017 1502 aa11.54□□□□□ -0.56
SND1-IT1-201ENST00000623342 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
SND1-IT1-201ENST00000623342 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
SND1-IT1-201ENST00000623342 UHRF1BP1Q6BDS2 1440 aa11.53□□□□□ -0.56
SND1-IT1-201ENST00000623342 SYCP2Q9BX26 1530 aa11.53□□□□□ -0.56
SND1-IT1-201ENST00000623342 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
SND1-IT1-201ENST00000623342 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
SND1-IT1-201ENST00000623342 USP47Q96K76 1375 aa11.52□□□□□ -0.57
SND1-IT1-201ENST00000623342 PLEKHH2Q8IVE3 1493 aa11.52□□□□□ -0.57
SND1-IT1-201ENST00000623342 ZNF326Q5BKZ1 582 aaKnown RBP11.51□□□□□ -0.57
SND1-IT1-201ENST00000623342 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
SND1-IT1-201ENST00000623342 FAM135AQ9P2D6 1515 aa11.51□□□□□ -0.57
SND1-IT1-201ENST00000623342 RALGAPBQ86X10 1494 aa11.51□□□□□ -0.57
SND1-IT1-201ENST00000623342 KDM5CP41229 1560 aa11.5□□□□□ -0.57
SND1-IT1-201ENST00000623342 FKBP8Q14318 412 aa11.5□□□□□ -0.57
SND1-IT1-201ENST00000623342 UHRF1BP1LA0JNW5 1464 aa11.49□□□□□ -0.57
SND1-IT1-201ENST00000623342 NEFLP07196 543 aa11.49□□□□□ -0.57
SND1-IT1-201ENST00000623342 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
SND1-IT1-201ENST00000623342 UNC13BO14795 1591 aa11.49□□□□□ -0.57
SND1-IT1-201ENST00000623342 PLXNC1O60486 1568 aa11.49□□□□□ -0.57
SND1-IT1-201ENST00000623342 ZCCHC11Q5TAX3 1644 aaKnown RBP11.48□□□□□ -0.57
SND1-IT1-201ENST00000623342 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
SND1-IT1-201ENST00000623342 BCORL1Q5H9F3 1711 aa11.48□□□□□ -0.57
SND1-IT1-201ENST00000623342 PLCH2O75038 1416 aa11.47□□□□□ -0.57
SND1-IT1-201ENST00000623342 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
SND1-IT1-201ENST00000623342 CARD11Q9BXL7 1154 aa11.46□□□□□ -0.58
SND1-IT1-201ENST00000623342 DUOX2Q9NRD8 1548 aa11.45□□□□□ -0.58
SND1-IT1-201ENST00000623342 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms