RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 ABCC5O15440 1437 aa29.38■■■□□ 2.29
PCDHB12-202ENST00000622978 RRP7BPQ9NSQ0 103 aa29.38■■■□□ 2.29
PCDHB12-202ENST00000622978 ROCK1Q13464 1354 aa29.37■■■□□ 2.29
PCDHB12-202ENST00000622978 DIEXFQ68CQ4 756 aaKnown RBP29.35■■■□□ 2.29
PCDHB12-202ENST00000622978 CROCC2H7BZ55 1655 aa29.29■■■□□ 2.28
PCDHB12-202ENST00000622978 UHRF1BP1LA0JNW5 1464 aa29.29■■■□□ 2.28
PCDHB12-202ENST00000622978 KDM6BO15054 1643 aa29.28■■■□□ 2.28
PCDHB12-202ENST00000622978 ZNF777Q9ULD5 760 aaPredicted RBP29.27■■■□□ 2.28
PCDHB12-202ENST00000622978 ADGBQ8N7X0 1667 aa29.26■■■□□ 2.27
PCDHB12-202ENST00000622978 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
PCDHB12-202ENST00000622978 SIN3AQ96ST3 1273 aa29.22■■■□□ 2.27
PCDHB12-202ENST00000622978 ZCCHC11Q5TAX3 1644 aaKnown RBP29.22■■■□□ 2.27
PCDHB12-202ENST00000622978 ACIN1Q9UKV3 1341 aaKnown RBP29.21■■■□□ 2.27
PCDHB12-202ENST00000622978 ADGRL2O95490 1459 aa29.2■■■□□ 2.26
PCDHB12-202ENST00000622978 KDM5BQ9UGL1 1544 aa29.2■■■□□ 2.26
PCDHB12-202ENST00000622978 TIMELESSQ9UNS1 1208 aa29.19■■■□□ 2.26
PCDHB12-202ENST00000622978 NEUROD1Q13562 356 aa29.19■■■□□ 2.26
PCDHB12-202ENST00000622978 CDC42BPBQ9Y5S2 1711 aa29.18■■■□□ 2.26
PCDHB12-202ENST00000622978 TTC37Q6PGP7 1564 aa29.17■■■□□ 2.26
PCDHB12-202ENST00000622978 SHANK2Q9UPX8 1470 aa29.17■■■□□ 2.26
PCDHB12-202ENST00000622978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.16■■■□□ 2.26
PCDHB12-202ENST00000622978 TRIM52Q96A61 297 aa29.15■■■□□ 2.26
PCDHB12-202ENST00000622978 NCOA1Q15788 1441 aa29.15■■■□□ 2.26
PCDHB12-202ENST00000622978 ARHGEF5Q12774 1597 aa29.13■■■□□ 2.25
PCDHB12-202ENST00000622978 SAMD9LQ8IVG5 1584 aa29.11■■■□□ 2.25
PCDHB12-202ENST00000622978 ANKRD30AQ9BXX3 1397 aa29.11■■■□□ 2.25
PCDHB12-202ENST00000622978 MYO5CQ9NQX4 1742 aa29.1■■■□□ 2.25
PCDHB12-202ENST00000622978 DENND4BO75064 1496 aaPredicted RBP29.09■■■□□ 2.25
PCDHB12-202ENST00000622978 C9orf84Q5VXU9 1444 aa29.08■■■□□ 2.25
PCDHB12-202ENST00000622978 OSCARQ8IYS5 282 aa29.08■■■□□ 2.25
PCDHB12-202ENST00000622978 ARHGAP5Q13017 1502 aa29.07■■■□□ 2.24
PCDHB12-202ENST00000622978 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
PCDHB12-202ENST00000622978 TONSLQ96HA7 1378 aa29.04■■■□□ 2.24
PCDHB12-202ENST00000622978 MPHOSPH9Q99550 1183 aa29.04■■■□□ 2.24
PCDHB12-202ENST00000622978 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
PCDHB12-202ENST00000622978 TSPY4P0CV99 314 aa29.01■■■□□ 2.23
PCDHB12-202ENST00000622978 TSPY10P0CW01 314 aa29.01■■■□□ 2.23
PCDHB12-202ENST00000622978 KCNH8Q96L42 1107 aa29■■■□□ 2.23
PCDHB12-202ENST00000622978 HNRNPMP52272 730 aaKnown RBP eCLIP29■■■□□ 2.23
PCDHB12-202ENST00000622978 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
PCDHB12-202ENST00000622978 RSPH4AQ5TD94 716 aa28.98■■■□□ 2.23
PCDHB12-202ENST00000622978 PLEKHH2Q8IVE3 1493 aa28.97■■■□□ 2.23
PCDHB12-202ENST00000622978 ANKRD50Q9ULJ7 1429 aa28.97■■■□□ 2.23
PCDHB12-202ENST00000622978 PPP1R15AO75807 674 aaPredicted RBP28.96■■■□□ 2.23
PCDHB12-202ENST00000622978 PLCH2O75038 1416 aa28.95■■■□□ 2.22
PCDHB12-202ENST00000622978 KIAA1107Q9UPP5 1409 aa28.93■■■□□ 2.22
PCDHB12-202ENST00000622978 WDR7Q9Y4E6 1490 aa28.93■■■□□ 2.22
PCDHB12-202ENST00000622978 PZPP20742 1482 aa28.92■■■□□ 2.22
PCDHB12-202ENST00000622978 MAST1Q9Y2H9 1570 aa28.91■■■□□ 2.22
PCDHB12-202ENST00000622978 KIF15Q9NS87 1388 aa28.9■■■□□ 2.22
PCDHB12-202ENST00000622978 SLC4A1APQ9BWU0 796 aaKnown RBP28.9■■■□□ 2.22
PCDHB12-202ENST00000622978 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.22
PCDHB12-202ENST00000622978 ARAP3Q8WWN8 1544 aa28.87■■■□□ 2.21
PCDHB12-202ENST00000622978 ANKRD30BQ9BXX2 1392 aa28.86■■■□□ 2.21
PCDHB12-202ENST00000622978 FOXD1Q16676 465 aa28.85■■■□□ 2.21
PCDHB12-202ENST00000622978 EFCAB2Q5VUJ9 269 aa28.84■■■□□ 2.21
PCDHB12-202ENST00000622978 ABCC1P33527 1531 aa28.83■■■□□ 2.21
PCDHB12-202ENST00000622978 KDM5DQ9BY66 1539 aa28.82■■■□□ 2.2
PCDHB12-202ENST00000622978 ARHGEF12Q9NZN5 1544 aa28.81■■■□□ 2.2
PCDHB12-202ENST00000622978 PLXNC1O60486 1568 aa28.81■■■□□ 2.2
PCDHB12-202ENST00000622978 ABCA9Q8IUA7 1624 aa28.8■■■□□ 2.2
PCDHB12-202ENST00000622978 RPRD2Q5VT52 1461 aaKnown RBP28.79■■■□□ 2.2
PCDHB12-202ENST00000622978 ASXL2Q76L83 1435 aa28.79■■■□□ 2.2
PCDHB12-202ENST00000622978 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
PCDHB12-202ENST00000622978 NUP155O75694 1391 aa28.76■■■□□ 2.19
PCDHB12-202ENST00000622978 MIER1Q8N108 512 aa28.75■■■□□ 2.19
PCDHB12-202ENST00000622978 NPM1P06748 294 aaKnown RBP eCLIP28.71■■■□□ 2.19
PCDHB12-202ENST00000622978 PKD2Q13563 968 aa28.71■■■□□ 2.19
PCDHB12-202ENST00000622978 TRAPPC8Q9Y2L5 1435 aa28.69■■■□□ 2.18
PCDHB12-202ENST00000622978 FANCAO15360 1455 aa28.68■■■□□ 2.18
PCDHB12-202ENST00000622978 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
PCDHB12-202ENST00000622978 DUOX2Q9NRD8 1548 aa28.68■■■□□ 2.18
PCDHB12-202ENST00000622978 UNC13BO14795 1591 aa28.68■■■□□ 2.18
PCDHB12-202ENST00000622978 L3MBTL2Q969R5 705 aa28.66■■■□□ 2.18
PCDHB12-202ENST00000622978 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.17
PCDHB12-202ENST00000622978 ERBINQ96RT1 1412 aa28.63■■■□□ 2.17
PCDHB12-202ENST00000622978 RTEL1-TNFRSF6BF6WH68 1400 aa28.61■■■□□ 2.17
PCDHB12-202ENST00000622978 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
PCDHB12-202ENST00000622978 SPAG9O60271 1321 aaKnown RBP28.58■■■□□ 2.17
PCDHB12-202ENST00000622978 ADGRL1O94910 1474 aa28.57■■■□□ 2.16
PCDHB12-202ENST00000622978 IQGAP3Q86VI3 1631 aa28.56■■■□□ 2.16
PCDHB12-202ENST00000622978 YTHDC1Q96MU7 727 aaKnown RBP28.55■■■□□ 2.16
PCDHB12-202ENST00000622978 MAGI2Q86UL8 1455 aa28.54■■■□□ 2.16
PCDHB12-202ENST00000622978 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
PCDHB12-202ENST00000622978 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
PCDHB12-202ENST00000622978 HIRIP3Q9BW71 556 aaPredicted RBP28.52■■■□□ 2.16
PCDHB12-202ENST00000622978 ATP7AQ04656 1500 aa28.51■■■□□ 2.15
PCDHB12-202ENST00000622978 SCAPERQ9BY12 1400 aa28.51■■■□□ 2.15
PCDHB12-202ENST00000622978 CFAP74Q9C0B2 1584 aa28.51■■■□□ 2.15
PCDHB12-202ENST00000622978 CD109Q6YHK3 1445 aa28.47■■■□□ 2.15
PCDHB12-202ENST00000622978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.47■■■□□ 2.15
PCDHB12-202ENST00000622978 NBPF8Q3BBV2 869 aa28.45■■■□□ 2.14
PCDHB12-202ENST00000622978 GTF3C3Q9Y5Q9 886 aa28.44■■■□□ 2.14
PCDHB12-202ENST00000622978 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
PCDHB12-202ENST00000622978 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
PCDHB12-202ENST00000622978 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
PCDHB12-202ENST00000622978 DDX10Q13206 875 aaKnown RBP28.42■■■□□ 2.14
PCDHB12-202ENST00000622978 EIF4G2P78344 907 aaKnown RBP eCLIP28.41■■■□□ 2.14
PCDHB12-202ENST00000622978 HSPA5P11021 654 aaKnown RBP28.41■■■□□ 2.14
PCDHB12-202ENST00000622978 ZNF518AQ6AHZ1 1483 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms