RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
LINC00963-214ENST00000622680 PREX1Q8TCU6 1659 aa18.29■□□□□ 0.52
LINC00963-214ENST00000622680 PLCH2O75038 1416 aa18.28■□□□□ 0.52
LINC00963-214ENST00000622680 FMN1Q68DA7 1419 aa18.28■□□□□ 0.52
LINC00963-214ENST00000622680 MAGI2Q86UL8 1455 aa18.27■□□□□ 0.52
LINC00963-214ENST00000622680 PREX2Q70Z35 1606 aa18.27■□□□□ 0.51
LINC00963-214ENST00000622680 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
LINC00963-214ENST00000622680 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
LINC00963-214ENST00000622680 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
LINC00963-214ENST00000622680 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
LINC00963-214ENST00000622680 KDM5CP41229 1560 aa18.25■□□□□ 0.51
LINC00963-214ENST00000622680 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
LINC00963-214ENST00000622680 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
LINC00963-214ENST00000622680 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
LINC00963-214ENST00000622680 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
LINC00963-214ENST00000622680 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
LINC00963-214ENST00000622680 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
LINC00963-214ENST00000622680 MLECQ14165 292 aa18.21■□□□□ 0.51
LINC00963-214ENST00000622680 C9orf84Q5VXU9 1444 aa18.21■□□□□ 0.51
LINC00963-214ENST00000622680 HSPA2P54652 639 aa18.2■□□□□ 0.5
LINC00963-214ENST00000622680 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
LINC00963-214ENST00000622680 ATP10AO60312 1499 aa18.2■□□□□ 0.5
LINC00963-214ENST00000622680 C3P01024 1663 aa18.19■□□□□ 0.5
LINC00963-214ENST00000622680 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
LINC00963-214ENST00000622680 FBXO41Q8TF61 875 aa18.19■□□□□ 0.5
LINC00963-214ENST00000622680 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
LINC00963-214ENST00000622680 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
LINC00963-214ENST00000622680 ABCC1P33527 1531 aa18.17■□□□□ 0.5
LINC00963-214ENST00000622680 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
LINC00963-214ENST00000622680 CLIP1P30622 1438 aa18.15■□□□□ 0.5
LINC00963-214ENST00000622680 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
LINC00963-214ENST00000622680 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
LINC00963-214ENST00000622680 EFCAB2Q5VUJ9 269 aa18.14■□□□□ 0.49
LINC00963-214ENST00000622680 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
LINC00963-214ENST00000622680 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
LINC00963-214ENST00000622680 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
LINC00963-214ENST00000622680 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
LINC00963-214ENST00000622680 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.49
LINC00963-214ENST00000622680 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
LINC00963-214ENST00000622680 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
LINC00963-214ENST00000622680 TRAPPC8Q9Y2L5 1435 aa18.06■□□□□ 0.48
LINC00963-214ENST00000622680 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
LINC00963-214ENST00000622680 MLH3Q9UHC1 1453 aa18.06■□□□□ 0.48
LINC00963-214ENST00000622680 MROH2AA6NES4 1674 aa18.05■□□□□ 0.48
LINC00963-214ENST00000622680 SYCP2Q9BX26 1530 aa18.04■□□□□ 0.48
LINC00963-214ENST00000622680 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
LINC00963-214ENST00000622680 AGLP35573 1532 aa18.03■□□□□ 0.48
LINC00963-214ENST00000622680 CLTCQ00610 1675 aaKnown RBP18.02■□□□□ 0.47
LINC00963-214ENST00000622680 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
LINC00963-214ENST00000622680 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
LINC00963-214ENST00000622680 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
LINC00963-214ENST00000622680 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
LINC00963-214ENST00000622680 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
LINC00963-214ENST00000622680 ZNF142P52746 1687 aaPredicted RBP17.96■□□□□ 0.47
LINC00963-214ENST00000622680 PLXNC1O60486 1568 aa17.95■□□□□ 0.46
LINC00963-214ENST00000622680 MYO3AQ8NEV4 1616 aa17.94■□□□□ 0.46
LINC00963-214ENST00000622680 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
LINC00963-214ENST00000622680 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
LINC00963-214ENST00000622680 ZNF777Q9ULD5 760 aaPredicted RBP17.91■□□□□ 0.46
LINC00963-214ENST00000622680 CAMSAP1Q5T5Y3 1602 aa17.89■□□□□ 0.45
LINC00963-214ENST00000622680 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
LINC00963-214ENST00000622680 LTBP4Q8N2S1 1624 aa17.87■□□□□ 0.45
LINC00963-214ENST00000622680 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
LINC00963-214ENST00000622680 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
LINC00963-214ENST00000622680 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
LINC00963-214ENST00000622680 PTPRTO14522 1441 aa17.85■□□□□ 0.45
LINC00963-214ENST00000622680 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
LINC00963-214ENST00000622680 PLEKHH2Q8IVE3 1493 aa17.85■□□□□ 0.45
LINC00963-214ENST00000622680 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-214ENST00000622680 SPAG9O60271 1321 aaKnown RBP17.84■□□□□ 0.45
LINC00963-214ENST00000622680 HNRNPMP52272 730 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC00963-214ENST00000622680 A2MP01023 1474 aa17.83■□□□□ 0.45
LINC00963-214ENST00000622680 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
LINC00963-214ENST00000622680 NPATQ14207 1427 aa17.82■□□□□ 0.44
LINC00963-214ENST00000622680 KIAA1107Q9UPP5 1409 aa17.82■□□□□ 0.44
LINC00963-214ENST00000622680 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
LINC00963-214ENST00000622680 DMRT2Q9Y5R5 561 aa17.82■□□□□ 0.44
LINC00963-214ENST00000622680 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
LINC00963-214ENST00000622680 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
LINC00963-214ENST00000622680 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
LINC00963-214ENST00000622680 PTPRKQ15262 1439 aa17.76■□□□□ 0.43
LINC00963-214ENST00000622680 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
LINC00963-214ENST00000622680 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
LINC00963-214ENST00000622680 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
LINC00963-214ENST00000622680 ZNF644Q9H582 1327 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-214ENST00000622680 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
LINC00963-214ENST00000622680 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
LINC00963-214ENST00000622680 CAMSAP2Q08AD1 1489 aa17.73■□□□□ 0.43
LINC00963-214ENST00000622680 PLA2R1Q13018 1463 aa17.72■□□□□ 0.43
LINC00963-214ENST00000622680 TCOF1Q13428 1488 aaKnown RBP17.71■□□□□ 0.43
LINC00963-214ENST00000622680 GGT6Q6P531 493 aa17.71■□□□□ 0.43
LINC00963-214ENST00000622680 NCOA2Q15596 1464 aa17.7■□□□□ 0.42
LINC00963-214ENST00000622680 CCDC141Q6ZP82 1450 aa17.7■□□□□ 0.42
LINC00963-214ENST00000622680 DISP3Q9P2K9 1392 aa17.7■□□□□ 0.42
LINC00963-214ENST00000622680 NEURL4Q96JN8 1562 aa17.7■□□□□ 0.42
LINC00963-214ENST00000622680 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
LINC00963-214ENST00000622680 CEP152O94986 1710 aa17.69■□□□□ 0.42
LINC00963-214ENST00000622680 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
LINC00963-214ENST00000622680 ARHGEF5Q12774 1597 aa17.68■□□□□ 0.42
LINC00963-214ENST00000622680 A2ML1A8K2U0 1454 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms