RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 MAP3K4Q9Y6R4 1608 aa22.16■■□□□ 1.14
GTF3C2-214ENST00000622534 CD109Q6YHK3 1445 aa22.15■■□□□ 1.14
GTF3C2-214ENST00000622534 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
GTF3C2-214ENST00000622534 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.13
GTF3C2-214ENST00000622534 FAM69CQ0P6D2 419 aa22.13■■□□□ 1.13
GTF3C2-214ENST00000622534 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
GTF3C2-214ENST00000622534 EFCAB2Q5VUJ9 269 aa22.11■■□□□ 1.13
GTF3C2-214ENST00000622534 KIF13AQ9H1H9 1805 aa22.1■■□□□ 1.13
GTF3C2-214ENST00000622534 CAMSAP2Q08AD1 1489 aa22.08■■□□□ 1.12
GTF3C2-214ENST00000622534 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
GTF3C2-214ENST00000622534 FANCAO15360 1455 aa22.07■■□□□ 1.12
GTF3C2-214ENST00000622534 SAMD9LQ8IVG5 1584 aa22.06■■□□□ 1.12
GTF3C2-214ENST00000622534 CFAP74Q9C0B2 1584 aa22.06■■□□□ 1.12
GTF3C2-214ENST00000622534 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
GTF3C2-214ENST00000622534 NEO1Q92859 1461 aa22.04■■□□□ 1.12
GTF3C2-214ENST00000622534 FAM50AQ14320 339 aaKnown RBP22.04■■□□□ 1.12
GTF3C2-214ENST00000622534 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
GTF3C2-214ENST00000622534 ZNF777Q9ULD5 760 aaPredicted RBP22.03■■□□□ 1.12
GTF3C2-214ENST00000622534 TEX14Q8IWB6 1497 aa22.02■■□□□ 1.12
GTF3C2-214ENST00000622534 ABCC1P33527 1531 aa22.01■■□□□ 1.11
GTF3C2-214ENST00000622534 PPRC1Q5VV67 1664 aaKnown RBP22■■□□□ 1.11
GTF3C2-214ENST00000622534 ARHGEF5Q12774 1597 aa22■■□□□ 1.11
GTF3C2-214ENST00000622534 AKNAQ7Z591 1439 aa22■■□□□ 1.11
GTF3C2-214ENST00000622534 MBD5Q9P267 1494 aa22■■□□□ 1.11
GTF3C2-214ENST00000622534 RSPH4AQ5TD94 716 aa21.99■■□□□ 1.11
GTF3C2-214ENST00000622534 DNMT1P26358 1616 aaKnown RBP21.98■■□□□ 1.11
GTF3C2-214ENST00000622534 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
GTF3C2-214ENST00000622534 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
GTF3C2-214ENST00000622534 DAPK1P53355 1430 aa21.96■■□□□ 1.11
GTF3C2-214ENST00000622534 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
GTF3C2-214ENST00000622534 ABCC5O15440 1437 aa21.95■■□□□ 1.1
GTF3C2-214ENST00000622534 CCDC141Q6ZP82 1450 aa21.93■■□□□ 1.1
GTF3C2-214ENST00000622534 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
GTF3C2-214ENST00000622534 HNRNPMP52272 730 aaKnown RBP eCLIP21.93■■□□□ 1.1
GTF3C2-214ENST00000622534 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
GTF3C2-214ENST00000622534 SHANK2Q9UPX8 1470 aa21.92■■□□□ 1.1
GTF3C2-214ENST00000622534 TSPOAP1O95153 1857 aa21.91■■□□□ 1.1
GTF3C2-214ENST00000622534 PTPRKQ15262 1439 aa21.9■■□□□ 1.1
GTF3C2-214ENST00000622534 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
GTF3C2-214ENST00000622534 CROCC2H7BZ55 1655 aa21.9■■□□□ 1.1
GTF3C2-214ENST00000622534 TRAPPC8Q9Y2L5 1435 aa21.88■■□□□ 1.09
GTF3C2-214ENST00000622534 MAST1Q9Y2H9 1570 aa21.88■■□□□ 1.09
GTF3C2-214ENST00000622534 POGZQ7Z3K3 1410 aa21.87■■□□□ 1.09
GTF3C2-214ENST00000622534 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
GTF3C2-214ENST00000622534 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
GTF3C2-214ENST00000622534 ITGAEP38570 1179 aa21.86■■□□□ 1.09
GTF3C2-214ENST00000622534 ROCK1Q13464 1354 aa21.86■■□□□ 1.09
GTF3C2-214ENST00000622534 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
GTF3C2-214ENST00000622534 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
GTF3C2-214ENST00000622534 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
GTF3C2-214ENST00000622534 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
GTF3C2-214ENST00000622534 KDM5CP41229 1560 aa21.83■■□□□ 1.09
GTF3C2-214ENST00000622534 RTEL1-TNFRSF6BF6WH68 1400 aa21.83■■□□□ 1.09
GTF3C2-214ENST00000622534 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
GTF3C2-214ENST00000622534 ADGBQ8N7X0 1667 aa21.81■■□□□ 1.08
GTF3C2-214ENST00000622534 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
GTF3C2-214ENST00000622534 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
GTF3C2-214ENST00000622534 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
GTF3C2-214ENST00000622534 MLH3Q9UHC1 1453 aa21.78■■□□□ 1.08
GTF3C2-214ENST00000622534 SPAG9O60271 1321 aaKnown RBP21.78■■□□□ 1.08
GTF3C2-214ENST00000622534 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
GTF3C2-214ENST00000622534 HFM1A2PYH4 1435 aa21.78■■□□□ 1.08
GTF3C2-214ENST00000622534 FRMPD1Q5SYB0 1578 aa21.78■■□□□ 1.08
GTF3C2-214ENST00000622534 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
GTF3C2-214ENST00000622534 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
GTF3C2-214ENST00000622534 PLXNC1O60486 1568 aa21.77■■□□□ 1.08
GTF3C2-214ENST00000622534 ZMYM4Q5VZL5 1548 aa21.77■■□□□ 1.08
GTF3C2-214ENST00000622534 COL17A1Q9UMD9 1497 aaPredicted RBP21.75■■□□□ 1.07
GTF3C2-214ENST00000622534 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
GTF3C2-214ENST00000622534 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
GTF3C2-214ENST00000622534 NAIPQ13075 1403 aa21.75■■□□□ 1.07
GTF3C2-214ENST00000622534 HECW2Q9P2P5 1572 aa21.74■■□□□ 1.07
GTF3C2-214ENST00000622534 MAGI2Q86UL8 1455 aa21.73■■□□□ 1.07
GTF3C2-214ENST00000622534 SETD5Q9C0A6 1442 aa21.73■■□□□ 1.07
GTF3C2-214ENST00000622534 GCC2Q8IWJ2 1684 aa21.72■■□□□ 1.07
GTF3C2-214ENST00000622534 KIDINS220Q9ULH0 1771 aa21.71■■□□□ 1.07
GTF3C2-214ENST00000622534 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.06
GTF3C2-214ENST00000622534 KIF15Q9NS87 1388 aa21.7■■□□□ 1.06
GTF3C2-214ENST00000622534 HRCP23327 699 aa21.69■■□□□ 1.06
GTF3C2-214ENST00000622534 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
GTF3C2-214ENST00000622534 KDM6BO15054 1643 aa21.67■■□□□ 1.06
GTF3C2-214ENST00000622534 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
GTF3C2-214ENST00000622534 ANKRD50Q9ULJ7 1429 aa21.64■■□□□ 1.05
GTF3C2-214ENST00000622534 RAB3GAP2Q9H2M9 1393 aa21.64■■□□□ 1.05
GTF3C2-214ENST00000622534 ERBINQ96RT1 1412 aa21.64■■□□□ 1.05
GTF3C2-214ENST00000622534 ABCA6Q8N139 1617 aa21.63■■□□□ 1.05
GTF3C2-214ENST00000622534 DIP2CQ9Y2E4 1556 aa21.63■■□□□ 1.05
GTF3C2-214ENST00000622534 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
GTF3C2-214ENST00000622534 DHX29Q7Z478 1369 aaKnown RBP21.62■■□□□ 1.05
GTF3C2-214ENST00000622534 YEATS2Q9ULM3 1422 aa21.61■■□□□ 1.05
GTF3C2-214ENST00000622534 A2MP01023 1474 aa21.6■■□□□ 1.05
GTF3C2-214ENST00000622534 REREQ9P2R6 1566 aa21.6■■□□□ 1.05
GTF3C2-214ENST00000622534 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
GTF3C2-214ENST00000622534 ATP10AO60312 1499 aa21.58■■□□□ 1.05
GTF3C2-214ENST00000622534 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
GTF3C2-214ENST00000622534 BCORL1Q5H9F3 1711 aa21.54■■□□□ 1.04
GTF3C2-214ENST00000622534 AGLP35573 1532 aa21.51■■□□□ 1.03
GTF3C2-214ENST00000622534 UNC13BO14795 1591 aa21.5■■□□□ 1.03
GTF3C2-214ENST00000622534 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
GTF3C2-214ENST00000622534 KDM5DQ9BY66 1539 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms