RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
ABCB1-211ENST00000622132 ANP32CO43423 234 aa11.92□□□□□ -0.5
ABCB1-211ENST00000622132 CDK13Q14004 1512 aaKnown RBP11.92□□□□□ -0.5
ABCB1-211ENST00000622132 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
ABCB1-211ENST00000622132 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
ABCB1-211ENST00000622132 AFAP1Q8N556 730 aa11.91□□□□□ -0.5
ABCB1-211ENST00000622132 TARBP1Q13395 1621 aaKnown RBP11.9□□□□□ -0.5
ABCB1-211ENST00000622132 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
ABCB1-211ENST00000622132 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
ABCB1-211ENST00000622132 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
ABCB1-211ENST00000622132 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.51
ABCB1-211ENST00000622132 EHBP1L1Q8N3D4 1523 aa11.88□□□□□ -0.51
ABCB1-211ENST00000622132 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
ABCB1-211ENST00000622132 NUP160Q12769 1436 aa11.88□□□□□ -0.51
ABCB1-211ENST00000622132 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
ABCB1-211ENST00000622132 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
ABCB1-211ENST00000622132 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
ABCB1-211ENST00000622132 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
ABCB1-211ENST00000622132 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
ABCB1-211ENST00000622132 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
ABCB1-211ENST00000622132 KIF15Q9NS87 1388 aa11.85□□□□□ -0.51
ABCB1-211ENST00000622132 WDR97A6NE52 1622 aa11.85□□□□□ -0.51
ABCB1-211ENST00000622132 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
ABCB1-211ENST00000622132 UGGT2Q9NYU1 1516 aa11.84□□□□□ -0.51
ABCB1-211ENST00000622132 MIA2Q96PC5 1412 aa11.83□□□□□ -0.52
ABCB1-211ENST00000622132 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
ABCB1-211ENST00000622132 NEFLP07196 543 aa11.83□□□□□ -0.52
ABCB1-211ENST00000622132 HDGFP51858 240 aaKnown RBP11.83□□□□□ -0.52
ABCB1-211ENST00000622132 RAPGEF3O95398 923 aa11.82□□□□□ -0.52
ABCB1-211ENST00000622132 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
ABCB1-211ENST00000622132 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
ABCB1-211ENST00000622132 CD109Q6YHK3 1445 aa11.8□□□□□ -0.52
ABCB1-211ENST00000622132 RRBP1Q9P2E9 1410 aaKnown RBP11.8□□□□□ -0.52
ABCB1-211ENST00000622132 CTTNBP2Q8WZ74 1663 aa11.8□□□□□ -0.52
ABCB1-211ENST00000622132 SCAPERQ9BY12 1400 aa11.79□□□□□ -0.52
ABCB1-211ENST00000622132 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
ABCB1-211ENST00000622132 ANKRD50Q9ULJ7 1429 aa11.79□□□□□ -0.52
ABCB1-211ENST00000622132 ATP10BO94823 1461 aa11.78□□□□□ -0.52
ABCB1-211ENST00000622132 KIAA0556O60303 1618 aa11.78□□□□□ -0.52
ABCB1-211ENST00000622132 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
ABCB1-211ENST00000622132 POGKQ9P215 609 aa11.77□□□□□ -0.52
ABCB1-211ENST00000622132 MAP3K1Q13233 1512 aa11.77□□□□□ -0.53
ABCB1-211ENST00000622132 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
ABCB1-211ENST00000622132 DISP1Q96F81 1524 aa11.76□□□□□ -0.53
ABCB1-211ENST00000622132 C9orf84Q5VXU9 1444 aa11.76□□□□□ -0.53
ABCB1-211ENST00000622132 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
ABCB1-211ENST00000622132 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
ABCB1-211ENST00000622132 RAPGEF6Q8TEU7 1601 aa11.76□□□□□ -0.53
ABCB1-211ENST00000622132 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
ABCB1-211ENST00000622132 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
ABCB1-211ENST00000622132 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
ABCB1-211ENST00000622132 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
ABCB1-211ENST00000622132 KIF14Q15058 1648 aa11.73□□□□□ -0.53
ABCB1-211ENST00000622132 CCDC144AA2RUR9 1427 aa11.73□□□□□ -0.53
ABCB1-211ENST00000622132 NUTM2DQ5VT03 806 aaPredicted RBP11.72□□□□□ -0.53
ABCB1-211ENST00000622132 DAPK1P53355 1430 aa11.72□□□□□ -0.53
ABCB1-211ENST00000622132 NEFMP07197 916 aa11.71□□□□□ -0.53
ABCB1-211ENST00000622132 STK26Q9P289 416 aa11.71□□□□□ -0.53
ABCB1-211ENST00000622132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.54
ABCB1-211ENST00000622132 EID1Q9Y6B2 187 aa11.7□□□□□ -0.54
ABCB1-211ENST00000622132 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
ABCB1-211ENST00000622132 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
ABCB1-211ENST00000622132 CAMSAP2Q08AD1 1489 aa11.68□□□□□ -0.54
ABCB1-211ENST00000622132 CCDC141Q6ZP82 1450 aa11.68□□□□□ -0.54
ABCB1-211ENST00000622132 FANCAO15360 1455 aa11.68□□□□□ -0.54
ABCB1-211ENST00000622132 ABCC2Q92887 1545 aa11.68□□□□□ -0.54
ABCB1-211ENST00000622132 WDR7Q9Y4E6 1490 aa11.67□□□□□ -0.54
ABCB1-211ENST00000622132 GPATCH8Q9UKJ3 1502 aaKnown RBP11.67□□□□□ -0.54
ABCB1-211ENST00000622132 HFM1A2PYH4 1435 aa11.67□□□□□ -0.54
ABCB1-211ENST00000622132 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
ABCB1-211ENST00000622132 TMF1P82094 1093 aa11.66□□□□□ -0.54
ABCB1-211ENST00000622132 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
ABCB1-211ENST00000622132 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
ABCB1-211ENST00000622132 ABCC5O15440 1437 aa11.65□□□□□ -0.54
ABCB1-211ENST00000622132 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
ABCB1-211ENST00000622132 PLCH2O75038 1416 aa11.65□□□□□ -0.54
ABCB1-211ENST00000622132 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
ABCB1-211ENST00000622132 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
ABCB1-211ENST00000622132 AKNAQ7Z591 1439 aa11.64□□□□□ -0.55
ABCB1-211ENST00000622132 PTPN23Q9H3S7 1636 aa11.64□□□□□ -0.55
ABCB1-211ENST00000622132 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
ABCB1-211ENST00000622132 ROCK1Q13464 1354 aa11.63□□□□□ -0.55
ABCB1-211ENST00000622132 FAM9BQ8IZU0 186 aa11.63□□□□□ -0.55
ABCB1-211ENST00000622132 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
ABCB1-211ENST00000622132 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
ABCB1-211ENST00000622132 CHD1O14646 1710 aa11.63□□□□□ -0.55
ABCB1-211ENST00000622132 NAIPQ13075 1403 aa11.62□□□□□ -0.55
ABCB1-211ENST00000622132 MRS2Q9HD23 443 aa11.62□□□□□ -0.55
ABCB1-211ENST00000622132 NCOA1Q15788 1441 aa11.6□□□□□ -0.55
ABCB1-211ENST00000622132 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
ABCB1-211ENST00000622132 TRAK1Q9UPV9 953 aa11.59□□□□□ -0.55
ABCB1-211ENST00000622132 POGZQ7Z3K3 1410 aa11.59□□□□□ -0.55
ABCB1-211ENST00000622132 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
ABCB1-211ENST00000622132 MIER1Q8N108 512 aa11.59□□□□□ -0.55
ABCB1-211ENST00000622132 WDR43Q15061 677 aaKnown RBP eCLIP11.58□□□□□ -0.56
ABCB1-211ENST00000622132 TEX14Q8IWB6 1497 aa11.58□□□□□ -0.56
ABCB1-211ENST00000622132 EIF3AQ14152 1382 aaKnown RBP11.57□□□□□ -0.56
ABCB1-211ENST00000622132 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
ABCB1-211ENST00000622132 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
ABCB1-211ENST00000622132 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms