RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 UBTFP17480 764 aaKnown RBP27.92■■■□□ 2.06
TARDBP-225ENST00000621715 PLPPR3Q6T4P5 718 aa27.92■■■□□ 2.06
TARDBP-225ENST00000621715 MAGI2Q86UL8 1455 aa27.91■■■□□ 2.06
TARDBP-225ENST00000621715 FBXO41Q8TF61 875 aa27.91■■■□□ 2.06
TARDBP-225ENST00000621715 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
TARDBP-225ENST00000621715 HSPA2P54652 639 aa27.9■■■□□ 2.06
TARDBP-225ENST00000621715 ATP1B4Q9UN42 357 aaPredicted RBP27.9■■■□□ 2.06
TARDBP-225ENST00000621715 FER1L4A9Z1Z3 1794 aa27.88■■■□□ 2.05
TARDBP-225ENST00000621715 MLECQ14165 292 aa27.88■■■□□ 2.05
TARDBP-225ENST00000621715 FMN1Q68DA7 1419 aa27.88■■■□□ 2.05
TARDBP-225ENST00000621715 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
TARDBP-225ENST00000621715 ARHGEF12Q9NZN5 1544 aa27.82■■■□□ 2.04
TARDBP-225ENST00000621715 ATP10AO60312 1499 aa27.81■■■□□ 2.04
TARDBP-225ENST00000621715 TROQ12816 1431 aaPredicted RBP27.8■■■□□ 2.04
TARDBP-225ENST00000621715 EFCAB2Q5VUJ9 269 aa27.79■■■□□ 2.04
TARDBP-225ENST00000621715 C9orf84Q5VXU9 1444 aa27.78■■■□□ 2.04
TARDBP-225ENST00000621715 KDM5CP41229 1560 aa27.77■■■□□ 2.04
TARDBP-225ENST00000621715 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
TARDBP-225ENST00000621715 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
TARDBP-225ENST00000621715 AFAP1Q8N556 730 aa27.76■■■□□ 2.03
TARDBP-225ENST00000621715 ZNF518AQ6AHZ1 1483 aa27.72■■■□□ 2.03
TARDBP-225ENST00000621715 CEBPAP49715 358 aaPredicted RBP27.72■■■□□ 2.03
TARDBP-225ENST00000621715 CDK11AQ9UQ88 783 aaPredicted RBP27.72■■■□□ 2.03
TARDBP-225ENST00000621715 DIP2CQ9Y2E4 1556 aa27.71■■■□□ 2.03
TARDBP-225ENST00000621715 ABCA6Q8N139 1617 aa27.68■■■□□ 2.02
TARDBP-225ENST00000621715 PREX1Q8TCU6 1659 aa27.67■■■□□ 2.02
TARDBP-225ENST00000621715 PREX2Q70Z35 1606 aa27.67■■■□□ 2.02
TARDBP-225ENST00000621715 CLIP1P30622 1438 aa27.67■■■□□ 2.02
TARDBP-225ENST00000621715 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
TARDBP-225ENST00000621715 ABCC1P33527 1531 aa27.63■■■□□ 2.01
TARDBP-225ENST00000621715 CASKIN1Q8WXD9 1431 aa27.63■■■□□ 2.01
TARDBP-225ENST00000621715 ITSN2Q9NZM3 1697 aa27.62■■■□□ 2.01
TARDBP-225ENST00000621715 REREQ9P2R6 1566 aa27.61■■■□□ 2.01
TARDBP-225ENST00000621715 STRCQ7RTU9 1775 aa27.61■■■□□ 2.01
TARDBP-225ENST00000621715 CDC42BPAQ5VT25 1732 aa27.61■■■□□ 2.01
TARDBP-225ENST00000621715 MLH3Q9UHC1 1453 aa27.6■■■□□ 2.01
TARDBP-225ENST00000621715 CERKQ8TCT0 537 aa27.57■■■□□ 2
TARDBP-225ENST00000621715 KIDINS220Q9ULH0 1771 aa27.57■■■□□ 2
TARDBP-225ENST00000621715 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
TARDBP-225ENST00000621715 C3P01024 1663 aa27.56■■■□□ 2
TARDBP-225ENST00000621715 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
TARDBP-225ENST00000621715 AGLP35573 1532 aa27.51■■■□□ 2
TARDBP-225ENST00000621715 SETD1BQ9UPS6 1966 aaKnown RBP27.51■■□□□ 1.99
TARDBP-225ENST00000621715 SAMD9LQ8IVG5 1584 aa27.5■■□□□ 1.99
TARDBP-225ENST00000621715 FYCO1Q9BQS8 1478 aa27.49■■□□□ 1.99
TARDBP-225ENST00000621715 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
TARDBP-225ENST00000621715 GPATCH8Q9UKJ3 1502 aaKnown RBP27.45■■□□□ 1.98
TARDBP-225ENST00000621715 SYCP2Q9BX26 1530 aa27.44■■□□□ 1.98
TARDBP-225ENST00000621715 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
TARDBP-225ENST00000621715 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.977e-7■■□□□ 12.4
TARDBP-225ENST00000621715 SUPT6HQ7KZ85 1726 aaKnown RBP27.36■■□□□ 1.97
TARDBP-225ENST00000621715 INO80Q9ULG1 1556 aaPredicted RBP27.33■■□□□ 1.97
TARDBP-225ENST00000621715 PTPRTO14522 1441 aa27.32■■□□□ 1.96
TARDBP-225ENST00000621715 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
TARDBP-225ENST00000621715 PLXNC1O60486 1568 aa27.31■■□□□ 1.96
TARDBP-225ENST00000621715 MROH2AA6NES4 1674 aa27.31■■□□□ 1.96
TARDBP-225ENST00000621715 DMRT2Q9Y5R5 561 aa27.31■■□□□ 1.96
TARDBP-225ENST00000621715 SPAG9O60271 1321 aaKnown RBP27.31■■□□□ 1.96
TARDBP-225ENST00000621715 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
TARDBP-225ENST00000621715 ESF1Q9H501 851 aaKnown RBP27.3■■□□□ 1.96
TARDBP-225ENST00000621715 NCOA1Q15788 1441 aa27.3■■□□□ 1.96
TARDBP-225ENST00000621715 LTBP4Q8N2S1 1624 aa27.3■■□□□ 1.96
TARDBP-225ENST00000621715 CLTCQ00610 1675 aaKnown RBP27.28■■□□□ 1.96
TARDBP-225ENST00000621715 KIAA1107Q9UPP5 1409 aa27.28■■□□□ 1.96
TARDBP-225ENST00000621715 ZMYM3Q14202 1370 aa27.27■■□□□ 1.96
TARDBP-225ENST00000621715 CFDP1Q9UEE9 299 aaPredicted RBP27.26■■□□□ 1.95
TARDBP-225ENST00000621715 CCNB3Q8WWL7 1395 aa27.24■■□□□ 1.95
TARDBP-225ENST00000621715 CAMSAP1Q5T5Y3 1602 aa27.24■■□□□ 1.95
TARDBP-225ENST00000621715 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
TARDBP-225ENST00000621715 A2MP01023 1474 aa27.24■■□□□ 1.95
TARDBP-225ENST00000621715 NPATQ14207 1427 aa27.24■■□□□ 1.95
TARDBP-225ENST00000621715 TIAM1Q13009 1591 aa27.23■■□□□ 1.95
TARDBP-225ENST00000621715 PLEKHH2Q8IVE3 1493 aa27.21■■□□□ 1.95
TARDBP-225ENST00000621715 MTUS2Q5JR59 1369 aa27.2■■□□□ 1.94
TARDBP-225ENST00000621715 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
TARDBP-225ENST00000621715 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
TARDBP-225ENST00000621715 PTPRKQ15262 1439 aa27.17■■□□□ 1.94
TARDBP-225ENST00000621715 ZNF142P52746 1687 aaPredicted RBP27.17■■□□□ 1.94
TARDBP-225ENST00000621715 NCKAP5LQ9HCH0 1330 aa27.16■■□□□ 1.94
TARDBP-225ENST00000621715 ADGBQ8N7X0 1667 aa27.15■■□□□ 1.94
TARDBP-225ENST00000621715 GGT6Q6P531 493 aa27.14■■□□□ 1.94
TARDBP-225ENST00000621715 EHBP1L1Q8N3D4 1523 aa27.13■■□□□ 1.93
TARDBP-225ENST00000621715 ILDR2Q71H61 639 aa27.12■■□□□ 1.93
TARDBP-225ENST00000621715 CEP170BQ9Y4F5 1589 aaPredicted RBP27.12■■□□□ 1.93
TARDBP-225ENST00000621715 ZNF335Q9H4Z2 1342 aaPredicted RBP27.09■■□□□ 1.93
TARDBP-225ENST00000621715 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
TARDBP-225ENST00000621715 DISP3Q9P2K9 1392 aa27.08■■□□□ 1.93
TARDBP-225ENST00000621715 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
TARDBP-225ENST00000621715 PLA2R1Q13018 1463 aa27.06■■□□□ 1.92
TARDBP-225ENST00000621715 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
TARDBP-225ENST00000621715 RTEL1-TNFRSF6BF6WH68 1400 aa27.03■■□□□ 1.92
TARDBP-225ENST00000621715 DHX29Q7Z478 1369 aaKnown RBP27.01■■□□□ 1.91
TARDBP-225ENST00000621715 DNMT1P26358 1616 aaKnown RBP27.01■■□□□ 1.91
TARDBP-225ENST00000621715 NCOA2Q15596 1464 aa27■■□□□ 1.91
TARDBP-225ENST00000621715 CAMSAP2Q08AD1 1489 aa27■■□□□ 1.91
TARDBP-225ENST00000621715 SPATA31D1Q6ZQQ2 1576 aa26.99■■□□□ 1.91
TARDBP-225ENST00000621715 FBXO31Q5XUX0 539 aaPredicted RBP26.98■■□□□ 1.91
TARDBP-225ENST00000621715 PKD2Q13563 968 aa26.97■■□□□ 1.91
TARDBP-225ENST00000621715 PPP6R1Q9UPN7 881 aa26.97■■□□□ 1.91
TARDBP-225ENST00000621715 A2ML1A8K2U0 1454 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms