RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
TP53-223ENST00000618944 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
TP53-223ENST00000618944 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
TP53-223ENST00000618944 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
TP53-223ENST00000618944 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
TP53-223ENST00000618944 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.11
TP53-223ENST00000618944 BCANQ96GW7 911 aa15.71■□□□□ 0.11
TP53-223ENST00000618944 EIF4G2P78344 907 aaKnown RBP eCLIP15.7■□□□□ 0.1
TP53-223ENST00000618944 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
TP53-223ENST00000618944 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
TP53-223ENST00000618944 RAPGEF6Q8TEU7 1601 aa15.68■□□□□ 0.1
TP53-223ENST00000618944 FKBP8Q14318 412 aa15.68■□□□□ 0.1
TP53-223ENST00000618944 ROCK1Q13464 1354 aa15.68■□□□□ 0.1
TP53-223ENST00000618944 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
TP53-223ENST00000618944 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
TP53-223ENST00000618944 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
TP53-223ENST00000618944 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
TP53-223ENST00000618944 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
TP53-223ENST00000618944 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
TP53-223ENST00000618944 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
TP53-223ENST00000618944 CARMIL2Q6F5E8 1435 aa15.63■□□□□ 0.09
TP53-223ENST00000618944 PLEKHD1A6NEE1 506 aa15.63■□□□□ 0.09
TP53-223ENST00000618944 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
TP53-223ENST00000618944 MYT1Q01538 1121 aa15.62■□□□□ 0.09
TP53-223ENST00000618944 DNMT1P26358 1616 aaKnown RBP15.61■□□□□ 0.09
TP53-223ENST00000618944 CAMSAP2Q08AD1 1489 aa15.61■□□□□ 0.09
TP53-223ENST00000618944 NCOA1Q15788 1441 aa15.59■□□□□ 0.09
TP53-223ENST00000618944 HNRNPUQ00839 825 aaKnown RBP eCLIP15.59■□□□□ 0.09
TP53-223ENST00000618944 RPRD2Q5VT52 1461 aaKnown RBP15.59■□□□□ 0.09
TP53-223ENST00000618944 ZNF326Q5BKZ1 582 aaKnown RBP15.58■□□□□ 0.09
TP53-223ENST00000618944 PKD2Q13563 968 aa15.58■□□□□ 0.08
TP53-223ENST00000618944 NUP160Q12769 1436 aa15.58■□□□□ 0.08
TP53-223ENST00000618944 KIF14Q15058 1648 aa15.57■□□□□ 0.08
TP53-223ENST00000618944 NEFLP07196 543 aa15.57■□□□□ 0.08
TP53-223ENST00000618944 CCDC184Q52MB2 194 aa15.57■□□□□ 0.08
TP53-223ENST00000618944 PZPP20742 1482 aa15.55■□□□□ 0.08
TP53-223ENST00000618944 TSHZ2Q9NRE2 1034 aa15.55■□□□□ 0.08
TP53-223ENST00000618944 CCDC7Q96M83 1385 aa15.54■□□□□ 0.08
TP53-223ENST00000618944 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
TP53-223ENST00000618944 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
TP53-223ENST00000618944 CNGB1Q14028 1251 aaPredicted RBP15.54■□□□□ 0.08
TP53-223ENST00000618944 ATP10BO94823 1461 aa15.53■□□□□ 0.08
TP53-223ENST00000618944 TEX14Q8IWB6 1497 aa15.53■□□□□ 0.08
TP53-223ENST00000618944 TSPY4P0CV99 314 aa15.52■□□□□ 0.08
TP53-223ENST00000618944 TSPY10P0CW01 314 aa15.52■□□□□ 0.08
TP53-223ENST00000618944 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.08
TP53-223ENST00000618944 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
TP53-223ENST00000618944 KIF7Q2M1P5 1343 aa15.51■□□□□ 0.07
TP53-223ENST00000618944 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
TP53-223ENST00000618944 FAM9BQ8IZU0 186 aa15.51■□□□□ 0.07
TP53-223ENST00000618944 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
TP53-223ENST00000618944 NUP155O75694 1391 aa15.5■□□□□ 0.07
TP53-223ENST00000618944 KIAA1107Q9UPP5 1409 aa15.5■□□□□ 0.07
TP53-223ENST00000618944 PTPRGP23470 1445 aa15.48■□□□□ 0.07
TP53-223ENST00000618944 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
TP53-223ENST00000618944 SPATA31E1Q6ZUB1 1445 aa15.47■□□□□ 0.07
TP53-223ENST00000618944 ITSN2Q9NZM3 1697 aa15.47■□□□□ 0.07
TP53-223ENST00000618944 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
TP53-223ENST00000618944 ADGRL2O95490 1459 aa15.47■□□□□ 0.07
TP53-223ENST00000618944 ABCA8O94911 1581 aa15.46■□□□□ 0.07
TP53-223ENST00000618944 IRX6P78412 446 aaPredicted RBP15.46■□□□□ 0.07
TP53-223ENST00000618944 C9orf84Q5VXU9 1444 aa15.46■□□□□ 0.07
TP53-223ENST00000618944 ABCC10Q5T3U5 1492 aa15.45■□□□□ 0.06
TP53-223ENST00000618944 ADCY10Q96PN6 1610 aa15.45■□□□□ 0.06
TP53-223ENST00000618944 USP47Q96K76 1375 aa15.42■□□□□ 0.06
TP53-223ENST00000618944 KIF15Q9NS87 1388 aa15.42■□□□□ 0.06
TP53-223ENST00000618944 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
TP53-223ENST00000618944 DCAF11Q8TEB1 546 aa15.4■□□□□ 0.06
TP53-223ENST00000618944 CARD11Q9BXL7 1154 aa15.39■□□□□ 0.05
TP53-223ENST00000618944 CDC42BPAQ5VT25 1732 aa15.39■□□□□ 0.05
TP53-223ENST00000618944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
TP53-223ENST00000618944 CROCC2H7BZ55 1655 aa15.38■□□□□ 0.05
TP53-223ENST00000618944 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
TP53-223ENST00000618944 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
TP53-223ENST00000618944 SHANK2Q9UPX8 1470 aa15.35■□□□□ 0.05
TP53-223ENST00000618944 ST20-MTHFSA0A0A6YYL1 179 aa15.35■□□□□ 0.05
TP53-223ENST00000618944 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
TP53-223ENST00000618944 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
TP53-223ENST00000618944 DHX29Q7Z478 1369 aaKnown RBP15.32■□□□□ 0.04
TP53-223ENST00000618944 CCDC141Q6ZP82 1450 aa15.31■□□□□ 0.04
TP53-223ENST00000618944 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
TP53-223ENST00000618944 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
TP53-223ENST00000618944 UHRF1BP1Q6BDS2 1440 aa15.3■□□□□ 0.04
TP53-223ENST00000618944 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
TP53-223ENST00000618944 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
TP53-223ENST00000618944 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
TP53-223ENST00000618944 ARHGEF5Q12774 1597 aa15.27■□□□□ 0.04
TP53-223ENST00000618944 RALGAPBQ86X10 1494 aa15.27■□□□□ 0.04
TP53-223ENST00000618944 ROCK2O75116 1388 aaKnown RBP15.27■□□□□ 0.03
TP53-223ENST00000618944 KDM5CP41229 1560 aa15.27■□□□□ 0.03
TP53-223ENST00000618944 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
TP53-223ENST00000618944 ARID4BQ4LE39 1312 aaPredicted RBP15.26■□□□□ 0.03
TP53-223ENST00000618944 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
TP53-223ENST00000618944 SYCP2Q9BX26 1530 aa15.26■□□□□ 0.03
TP53-223ENST00000618944 CDC42BPBQ9Y5S2 1711 aa15.26■□□□□ 0.03
TP53-223ENST00000618944 KDM5DQ9BY66 1539 aa15.25■□□□□ 0.03
TP53-223ENST00000618944 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
TP53-223ENST00000618944 TMC1Q8TDI8 760 aa15.25■□□□□ 0.03
TP53-223ENST00000618944 CHD1O14646 1710 aa15.25■□□□□ 0.03
TP53-223ENST00000618944 CCDC144AA2RUR9 1427 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms