RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 CDC42BPBQ9Y5S2 1711 aa36.76■■■■□ 3.47
ACACA-239ENST00000617548 MTUS2Q5JR59 1369 aa36.75■■■■□ 3.47
ACACA-239ENST00000617548 POGZQ7Z3K3 1410 aa36.75■■■■□ 3.47
ACACA-239ENST00000617548 PREX2Q70Z35 1606 aa36.74■■■■□ 3.47
ACACA-239ENST00000617548 ZMYM4Q5VZL5 1548 aa36.73■■■■□ 3.47
ACACA-239ENST00000617548 ARHGEF40Q8TER5 1519 aa36.7■■■■□ 3.47
ACACA-239ENST00000617548 ARID4BQ4LE39 1312 aaPredicted RBP36.69■■■■□ 3.46
ACACA-239ENST00000617548 CDC42BPAQ5VT25 1732 aa36.69■■■■□ 3.46
ACACA-239ENST00000617548 ZFYVE16Q7Z3T8 1539 aa36.67■■■■□ 3.46
ACACA-239ENST00000617548 MAGI2Q86UL8 1455 aa36.67■■■■□ 3.46
ACACA-239ENST00000617548 VPS8Q8N3P4 1428 aa36.64■■■■□ 3.46
ACACA-239ENST00000617548 ZNF518AQ6AHZ1 1483 aa36.63■■■■□ 3.45
ACACA-239ENST00000617548 YEATS2Q9ULM3 1422 aa36.62■■■■□ 3.45
ACACA-239ENST00000617548 EHBP1L1Q8N3D4 1523 aa36.61■■■■□ 3.45
ACACA-239ENST00000617548 ZNF777Q9ULD5 760 aaPredicted RBP36.61■■■■□ 3.45
ACACA-239ENST00000617548 CCNB3Q8WWL7 1395 aa36.61■■■■□ 3.45
ACACA-239ENST00000617548 GPATCH8Q9UKJ3 1502 aaKnown RBP36.6■■■■□ 3.45
ACACA-239ENST00000617548 AFAP1Q8N556 730 aa36.6■■■■□ 3.45
ACACA-239ENST00000617548 MYT1LQ9UL68 1186 aa36.58■■■■□ 3.45
ACACA-239ENST00000617548 ABCC1P33527 1531 aa36.57■■■■□ 3.44
ACACA-239ENST00000617548 CFDP1Q9UEE9 299 aaPredicted RBP36.55■■■■□ 3.44
ACACA-239ENST00000617548 ITSN2Q9NZM3 1697 aa36.52■■■■□ 3.44
ACACA-239ENST00000617548 BCORL1Q5H9F3 1711 aa36.52■■■■□ 3.44
ACACA-239ENST00000617548 KDM5CP41229 1560 aa36.52■■■■□ 3.44
ACACA-239ENST00000617548 TIAM1Q13009 1591 aa36.52■■■■□ 3.44
ACACA-239ENST00000617548 ARHGEF12Q9NZN5 1544 aa36.51■■■■□ 3.44
ACACA-239ENST00000617548 ADAMTSL3P82987 1691 aa36.5■■■■□ 3.43
ACACA-239ENST00000617548 TRAPPC8Q9Y2L5 1435 aa36.5■■■■□ 3.43
ACACA-239ENST00000617548 ATP10AO60312 1499 aa36.49■■■■□ 3.43
ACACA-239ENST00000617548 SAMD9LQ8IVG5 1584 aa36.49■■■■□ 3.43
ACACA-239ENST00000617548 HECW2Q9P2P5 1572 aa36.47■■■■□ 3.43
ACACA-239ENST00000617548 C9orf84Q5VXU9 1444 aa36.44■■■■□ 3.42
ACACA-239ENST00000617548 SUPT6HQ7KZ85 1726 aaKnown RBP36.43■■■■□ 3.42
ACACA-239ENST00000617548 SIGLEC1Q9BZZ2 1709 aa36.42■■■■□ 3.42
ACACA-239ENST00000617548 SYCP2Q9BX26 1530 aa36.42■■■■□ 3.42
ACACA-239ENST00000617548 HNRNPMP52272 730 aaKnown RBP eCLIP36.41■■■■□ 3.422e-6■■■■□ 25.1
ACACA-239ENST00000617548 PLEKHH2Q8IVE3 1493 aa36.41■■■■□ 3.42
ACACA-239ENST00000617548 MLH3Q9UHC1 1453 aa36.41■■■■□ 3.42
ACACA-239ENST00000617548 MADDQ8WXG6 1647 aa36.4■■■■□ 3.42
ACACA-239ENST00000617548 NCOA2Q15596 1464 aa36.39■■■■□ 3.42
ACACA-239ENST00000617548 MLECQ14165 292 aa36.39■■■■□ 3.42
ACACA-239ENST00000617548 PTPRMP28827 1452 aa36.37■■■■□ 3.41
ACACA-239ENST00000617548 KIAA1107Q9UPP5 1409 aa36.37■■■■□ 3.41
ACACA-239ENST00000617548 LRRC9Q6ZRR7 1453 aa36.37■■■■□ 3.41
ACACA-239ENST00000617548 DIP2CQ9Y2E4 1556 aa36.36■■■■□ 3.41
ACACA-239ENST00000617548 MAP3K1Q13233 1512 aa36.34■■■■□ 3.41
ACACA-239ENST00000617548 ABCA6Q8N139 1617 aa36.33■■■■□ 3.41
ACACA-239ENST00000617548 APLP2Q06481 763 aa36.32■■■■□ 3.4
ACACA-239ENST00000617548 ZNF644Q9H582 1327 aaPredicted RBP36.32■■■■□ 3.4
ACACA-239ENST00000617548 RIMS1Q86UR5 1692 aaKnown RBP36.31■■■■□ 3.4
ACACA-239ENST00000617548 SPAG9O60271 1321 aaKnown RBP36.31■■■■□ 3.4
ACACA-239ENST00000617548 KIDINS220Q9ULH0 1771 aa36.3■■■■□ 3.4
ACACA-239ENST00000617548 KANK4Q5T7N3 995 aaPredicted RBP36.29■■■■□ 3.4
ACACA-239ENST00000617548 REREQ9P2R6 1566 aa36.25■■■■□ 3.39
ACACA-239ENST00000617548 FER1L4A9Z1Z3 1794 aa36.22■■■■□ 3.39
ACACA-239ENST00000617548 PLPPR3Q6T4P5 718 aa36.21■■■■□ 3.39
ACACA-239ENST00000617548 ATP7AQ04656 1500 aa36.2■■■■□ 3.39
ACACA-239ENST00000617548 CAMSAP2Q08AD1 1489 aa36.18■■■■□ 3.38
ACACA-239ENST00000617548 MBD5Q9P267 1494 aa36.18■■■■□ 3.38
ACACA-239ENST00000617548 INO80Q9ULG1 1556 aaPredicted RBP36.16■■■■□ 3.38
ACACA-239ENST00000617548 AGLP35573 1532 aa36.14■■■■□ 3.38
ACACA-239ENST00000617548 RSPH4AQ5TD94 716 aa36.09■■■■□ 3.37
ACACA-239ENST00000617548 CCDC141Q6ZP82 1450 aa36.08■■■■□ 3.37
ACACA-239ENST00000617548 ESF1Q9H501 851 aaKnown RBP36.07■■■■□ 3.36
ACACA-239ENST00000617548 MYOM3Q5VTT5 1437 aa36.07■■■■□ 3.36
ACACA-239ENST00000617548 A2MP01023 1474 aa36.05■■■■□ 3.36
ACACA-239ENST00000617548 RTEL1-TNFRSF6BF6WH68 1400 aa36.03■■■■□ 3.36
ACACA-239ENST00000617548 MIA2Q96PC5 1412 aa36.01■■■■□ 3.36
ACACA-239ENST00000617548 ADGBQ8N7X0 1667 aa36.01■■■■□ 3.36
ACACA-239ENST00000617548 ARHGEF5Q12774 1597 aa36■■■■□ 3.35
ACACA-239ENST00000617548 TSPY4P0CV99 314 aa35.99■■■■□ 3.35
ACACA-239ENST00000617548 TSPY10P0CW01 314 aa35.99■■■■□ 3.35
ACACA-239ENST00000617548 CEBPAP49715 358 aaPredicted RBP35.98■■■■□ 3.35
ACACA-239ENST00000617548 PLXNC1O60486 1568 aa35.98■■■■□ 3.35
ACACA-239ENST00000617548 LMTK3Q96Q04 1460 aa35.92■■■■□ 3.34
ACACA-239ENST00000617548 GGT6Q6P531 493 aa35.9■■■■□ 3.34
ACACA-239ENST00000617548 CNTLNQ9NXG0 1405 aa35.9■■■■□ 3.34
ACACA-239ENST00000617548 DHX29Q7Z478 1369 aaKnown RBP35.89■■■■□ 3.34
ACACA-239ENST00000617548 C3P01024 1663 aa35.86■■■■□ 3.33
ACACA-239ENST00000617548 PTPN23Q9H3S7 1636 aa35.84■■■■□ 3.33
ACACA-239ENST00000617548 FGD6Q6ZV73 1430 aa35.82■■■■□ 3.32
ACACA-239ENST00000617548 MAST1Q9Y2H9 1570 aa35.81■■■■□ 3.32
ACACA-239ENST00000617548 HSPA2P54652 639 aa35.8■■■■□ 3.32
ACACA-239ENST00000617548 PREX1Q8TCU6 1659 aa35.79■■■■□ 3.32
ACACA-239ENST00000617548 KIF3BO15066 747 aa35.79■■■■□ 3.32
ACACA-239ENST00000617548 MROH2AA6NES4 1674 aa35.78■■■■□ 3.32
ACACA-239ENST00000617548 CLTCQ00610 1675 aaKnown RBP35.78■■■■□ 3.32
ACACA-239ENST00000617548 PPP6R1Q9UPN7 881 aa35.77■■■■□ 3.32
ACACA-239ENST00000617548 ZMYM3Q14202 1370 aa35.76■■■■□ 3.31
ACACA-239ENST00000617548 SETD1BQ9UPS6 1966 aaKnown RBP35.73■■■■□ 3.31
ACACA-239ENST00000617548 UHRF1BP1Q6BDS2 1440 aa35.73■■■■□ 3.31
ACACA-239ENST00000617548 TCOF1Q13428 1488 aaKnown RBP35.73■■■■□ 3.31
ACACA-239ENST00000617548 ABCC5O15440 1437 aa35.7■■■■□ 3.31
ACACA-239ENST00000617548 CROCC2H7BZ55 1655 aa35.68■■■■□ 3.3
ACACA-239ENST00000617548 SHANK2Q9UPX8 1470 aa35.67■■■■□ 3.3
ACACA-239ENST00000617548 DAPK1P53355 1430 aa35.66■■■■□ 3.3
ACACA-239ENST00000617548 DNMT1P26358 1616 aaKnown RBP35.65■■■■□ 3.3
ACACA-239ENST00000617548 FAM50AQ14320 339 aaKnown RBP35.64■■■■□ 3.3
ACACA-239ENST00000617548 NPATQ14207 1427 aa35.64■■■■□ 3.3
ACACA-239ENST00000617548 WASHC2CQ9Y4E1 1318 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms