RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
SRGAP2C-205ENST00000617209 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
SRGAP2C-205ENST00000617209 PREX2Q70Z35 1606 aa24.6■■□□□ 1.53
SRGAP2C-205ENST00000617209 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
SRGAP2C-205ENST00000617209 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
SRGAP2C-205ENST00000617209 ZMYM4Q5VZL5 1548 aa24.56■■□□□ 1.52
SRGAP2C-205ENST00000617209 MAGI2Q86UL8 1455 aa24.55■■□□□ 1.52
SRGAP2C-205ENST00000617209 EHBP1L1Q8N3D4 1523 aa24.55■■□□□ 1.52
SRGAP2C-205ENST00000617209 GPATCH8Q9UKJ3 1502 aaKnown RBP24.55■■□□□ 1.52
SRGAP2C-205ENST00000617209 POGZQ7Z3K3 1410 aa24.54■■□□□ 1.52
SRGAP2C-205ENST00000617209 TIAM1Q13009 1591 aa24.52■■□□□ 1.52
SRGAP2C-205ENST00000617209 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
SRGAP2C-205ENST00000617209 CCNB3Q8WWL7 1395 aa24.49■■□□□ 1.51
SRGAP2C-205ENST00000617209 ZNF518AQ6AHZ1 1483 aa24.49■■□□□ 1.51
SRGAP2C-205ENST00000617209 ARHGEF40Q8TER5 1519 aa24.47■■□□□ 1.51
SRGAP2C-205ENST00000617209 ABCC1P33527 1531 aa24.45■■□□□ 1.51
SRGAP2C-205ENST00000617209 AFAP1Q8N556 730 aa24.45■■□□□ 1.5
SRGAP2C-205ENST00000617209 CFDP1Q9UEE9 299 aaPredicted RBP24.45■■□□□ 1.5
SRGAP2C-205ENST00000617209 KDM5CP41229 1560 aa24.45■■□□□ 1.5
SRGAP2C-205ENST00000617209 ZFYVE16Q7Z3T8 1539 aa24.45■■□□□ 1.5
SRGAP2C-205ENST00000617209 ARHGEF12Q9NZN5 1544 aa24.44■■□□□ 1.5
SRGAP2C-205ENST00000617209 SUPT6HQ7KZ85 1726 aaKnown RBP24.44■■□□□ 1.5
SRGAP2C-205ENST00000617209 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
SRGAP2C-205ENST00000617209 ITSN2Q9NZM3 1697 aa24.43■■□□□ 1.5
SRGAP2C-205ENST00000617209 YEATS2Q9ULM3 1422 aa24.43■■□□□ 1.5
SRGAP2C-205ENST00000617209 SAMD9LQ8IVG5 1584 aa24.42■■□□□ 1.5
SRGAP2C-205ENST00000617209 ZNF777Q9ULD5 760 aaPredicted RBP24.41■■□□□ 1.5
SRGAP2C-205ENST00000617209 KIAA1107Q9UPP5 1409 aa24.41■■□□□ 1.5
SRGAP2C-205ENST00000617209 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
SRGAP2C-205ENST00000617209 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
SRGAP2C-205ENST00000617209 TRAPPC8Q9Y2L5 1435 aa24.4■■□□□ 1.5
SRGAP2C-205ENST00000617209 MLH3Q9UHC1 1453 aa24.39■■□□□ 1.5
SRGAP2C-205ENST00000617209 ATP10AO60312 1499 aa24.38■■□□□ 1.49
SRGAP2C-205ENST00000617209 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
SRGAP2C-205ENST00000617209 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
SRGAP2C-205ENST00000617209 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
SRGAP2C-205ENST00000617209 BCORL1Q5H9F3 1711 aa24.35■■□□□ 1.49
SRGAP2C-205ENST00000617209 ADAMTSL3P82987 1691 aa24.35■■□□□ 1.49
SRGAP2C-205ENST00000617209 APLP2Q06481 763 aa24.35■■□□□ 1.49
SRGAP2C-205ENST00000617209 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
SRGAP2C-205ENST00000617209 SYCP2Q9BX26 1530 aa24.33■■□□□ 1.49
SRGAP2C-205ENST00000617209 C9orf84Q5VXU9 1444 aa24.31■■□□□ 1.48
SRGAP2C-205ENST00000617209 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
SRGAP2C-205ENST00000617209 KIDINS220Q9ULH0 1771 aa24.3■■□□□ 1.48
SRGAP2C-205ENST00000617209 ZNF644Q9H582 1327 aaPredicted RBP24.3■■□□□ 1.48
SRGAP2C-205ENST00000617209 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
SRGAP2C-205ENST00000617209 MYT1LQ9UL68 1186 aa24.29■■□□□ 1.48
SRGAP2C-205ENST00000617209 DIP2CQ9Y2E4 1556 aa24.29■■□□□ 1.48
SRGAP2C-205ENST00000617209 MBD5Q9P267 1494 aa24.28■■□□□ 1.48
SRGAP2C-205ENST00000617209 SPAG9O60271 1321 aaKnown RBP24.27■■□□□ 1.48
SRGAP2C-205ENST00000617209 ABCA6Q8N139 1617 aa24.26■■□□□ 1.47
SRGAP2C-205ENST00000617209 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
SRGAP2C-205ENST00000617209 MADDQ8WXG6 1647 aa24.22■■□□□ 1.47
SRGAP2C-205ENST00000617209 CAMSAP2Q08AD1 1489 aa24.22■■□□□ 1.47
SRGAP2C-205ENST00000617209 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
SRGAP2C-205ENST00000617209 AGLP35573 1532 aa24.21■■□□□ 1.47
SRGAP2C-205ENST00000617209 PTPRMP28827 1452 aa24.21■■□□□ 1.47
SRGAP2C-205ENST00000617209 INO80Q9ULG1 1556 aaPredicted RBP24.2■■□□□ 1.47
SRGAP2C-205ENST00000617209 ATP7AQ04656 1500 aa24.2■■□□□ 1.47
SRGAP2C-205ENST00000617209 MYOM3Q5VTT5 1437 aa24.2■■□□□ 1.46
SRGAP2C-205ENST00000617209 RTEL1-TNFRSF6BF6WH68 1400 aa24.19■■□□□ 1.46
SRGAP2C-205ENST00000617209 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
SRGAP2C-205ENST00000617209 MLECQ14165 292 aa24.16■■□□□ 1.46
SRGAP2C-205ENST00000617209 CCDC141Q6ZP82 1450 aa24.15■■□□□ 1.46
SRGAP2C-205ENST00000617209 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
SRGAP2C-205ENST00000617209 FER1L4A9Z1Z3 1794 aa24.13■■□□□ 1.45
SRGAP2C-205ENST00000617209 ADGBQ8N7X0 1667 aa24.11■■□□□ 1.45
SRGAP2C-205ENST00000617209 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
SRGAP2C-205ENST00000617209 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
SRGAP2C-205ENST00000617209 A2MP01023 1474 aa24.1■■□□□ 1.45
SRGAP2C-205ENST00000617209 PLXNC1O60486 1568 aa24.09■■□□□ 1.45
SRGAP2C-205ENST00000617209 DHX29Q7Z478 1369 aaKnown RBP24.04■■□□□ 1.44
SRGAP2C-205ENST00000617209 FGD6Q6ZV73 1430 aa24.04■■□□□ 1.44
SRGAP2C-205ENST00000617209 PTPN23Q9H3S7 1636 aa24.04■■□□□ 1.44
SRGAP2C-205ENST00000617209 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
SRGAP2C-205ENST00000617209 TCOF1Q13428 1488 aaKnown RBP24.02■■□□□ 1.44
SRGAP2C-205ENST00000617209 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
SRGAP2C-205ENST00000617209 PPP6R1Q9UPN7 881 aa24■■□□□ 1.43
SRGAP2C-205ENST00000617209 CNTLNQ9NXG0 1405 aa23.99■■□□□ 1.43
SRGAP2C-205ENST00000617209 SETD1BQ9UPS6 1966 aaKnown RBP23.97■■□□□ 1.43
SRGAP2C-205ENST00000617209 ABCC5O15440 1437 aa23.95■■□□□ 1.42
SRGAP2C-205ENST00000617209 CEBPAP49715 358 aaPredicted RBP23.94■■□□□ 1.42
SRGAP2C-205ENST00000617209 MROH2AA6NES4 1674 aa23.94■■□□□ 1.42
SRGAP2C-205ENST00000617209 SHANK2Q9UPX8 1470 aa23.94■■□□□ 1.42
SRGAP2C-205ENST00000617209 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
SRGAP2C-205ENST00000617209 GGT6Q6P531 493 aa23.93■■□□□ 1.42
SRGAP2C-205ENST00000617209 CROCC2H7BZ55 1655 aa23.92■■□□□ 1.42
SRGAP2C-205ENST00000617209 C3P01024 1663 aa23.92■■□□□ 1.42
SRGAP2C-205ENST00000617209 DAPK1P53355 1430 aa23.92■■□□□ 1.42
SRGAP2C-205ENST00000617209 KIF3BO15066 747 aa23.91■■□□□ 1.42
SRGAP2C-205ENST00000617209 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
SRGAP2C-205ENST00000617209 LMTK3Q96Q04 1460 aa23.9■■□□□ 1.42
SRGAP2C-205ENST00000617209 ZMYM3Q14202 1370 aa23.89■■□□□ 1.41
SRGAP2C-205ENST00000617209 CLTCQ00610 1675 aaKnown RBP23.87■■□□□ 1.41
SRGAP2C-205ENST00000617209 DUOX2Q9NRD8 1548 aa23.86■■□□□ 1.41
SRGAP2C-205ENST00000617209 FAM135AQ9P2D6 1515 aa23.86■■□□□ 1.41
SRGAP2C-205ENST00000617209 PREX1Q8TCU6 1659 aa23.86■■□□□ 1.41
SRGAP2C-205ENST00000617209 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
SRGAP2C-205ENST00000617209 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.41
SRGAP2C-205ENST00000617209 NPATQ14207 1427 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms