RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 KDM6BO15054 1643 aa21.05■□□□□ 0.96
CDKN1A-208ENST00000615513 DENND4BO75064 1496 aaPredicted RBP21.05■□□□□ 0.96
CDKN1A-208ENST00000615513 ABCA8O94911 1581 aa21.05■□□□□ 0.96
CDKN1A-208ENST00000615513 TRIM52Q96A61 297 aa21.02■□□□□ 0.96
CDKN1A-208ENST00000615513 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.96
CDKN1A-208ENST00000615513 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
CDKN1A-208ENST00000615513 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
CDKN1A-208ENST00000615513 MPHOSPH9Q99550 1183 aa21■□□□□ 0.95
CDKN1A-208ENST00000615513 CAMSAP2Q08AD1 1489 aa21■□□□□ 0.95
CDKN1A-208ENST00000615513 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
CDKN1A-208ENST00000615513 KIF14Q15058 1648 aa20.98■□□□□ 0.95
CDKN1A-208ENST00000615513 ATP10BO94823 1461 aa20.95■□□□□ 0.94
CDKN1A-208ENST00000615513 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
CDKN1A-208ENST00000615513 ADGRL2O95490 1459 aa20.94■□□□□ 0.94
CDKN1A-208ENST00000615513 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
CDKN1A-208ENST00000615513 NCOA1Q15788 1441 aa20.92■□□□□ 0.94
CDKN1A-208ENST00000615513 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
CDKN1A-208ENST00000615513 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
CDKN1A-208ENST00000615513 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
CDKN1A-208ENST00000615513 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
CDKN1A-208ENST00000615513 PTPRGP23470 1445 aa20.9■□□□□ 0.94
CDKN1A-208ENST00000615513 RPRD2Q5VT52 1461 aaKnown RBP20.87■□□□□ 0.93
CDKN1A-208ENST00000615513 CDC42BPAQ5VT25 1732 aa20.86■□□□□ 0.93
CDKN1A-208ENST00000615513 SHANK2Q9UPX8 1470 aa20.86■□□□□ 0.93
CDKN1A-208ENST00000615513 ANKRD30AQ9BXX3 1397 aa20.86■□□□□ 0.93
CDKN1A-208ENST00000615513 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
CDKN1A-208ENST00000615513 CHD1O14646 1710 aa20.84■□□□□ 0.93
CDKN1A-208ENST00000615513 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
CDKN1A-208ENST00000615513 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
CDKN1A-208ENST00000615513 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
CDKN1A-208ENST00000615513 PZPP20742 1482 aa20.82■□□□□ 0.92
CDKN1A-208ENST00000615513 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
CDKN1A-208ENST00000615513 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
CDKN1A-208ENST00000615513 FOXD1Q16676 465 aa20.8■□□□□ 0.92
CDKN1A-208ENST00000615513 ANP32CO43423 234 aa20.79■□□□□ 0.92
CDKN1A-208ENST00000615513 TEX14Q8IWB6 1497 aa20.79■□□□□ 0.92
CDKN1A-208ENST00000615513 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
CDKN1A-208ENST00000615513 ARHGEF5Q12774 1597 aa20.77■□□□□ 0.92
CDKN1A-208ENST00000615513 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.92
CDKN1A-208ENST00000615513 EIF4G2P78344 907 aaKnown RBP eCLIP20.76■□□□□ 0.911e-7■■■□□ 17.9
CDKN1A-208ENST00000615513 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
CDKN1A-208ENST00000615513 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
CDKN1A-208ENST00000615513 HSPA5P11021 654 aaKnown RBP20.75■□□□□ 0.91
CDKN1A-208ENST00000615513 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
CDKN1A-208ENST00000615513 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
CDKN1A-208ENST00000615513 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
CDKN1A-208ENST00000615513 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
CDKN1A-208ENST00000615513 RSPH4AQ5TD94 716 aa20.71■□□□□ 0.91
CDKN1A-208ENST00000615513 KDM5DQ9BY66 1539 aa20.7■□□□□ 0.9
CDKN1A-208ENST00000615513 ABCC2Q92887 1545 aa20.69■□□□□ 0.9
CDKN1A-208ENST00000615513 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
CDKN1A-208ENST00000615513 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
CDKN1A-208ENST00000615513 SAMD9LQ8IVG5 1584 aa20.67■□□□□ 0.9
CDKN1A-208ENST00000615513 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
CDKN1A-208ENST00000615513 PKD2Q13563 968 aa20.66■□□□□ 0.9
CDKN1A-208ENST00000615513 NBPF8Q3BBV2 869 aa20.66■□□□□ 0.9
CDKN1A-208ENST00000615513 KIF15Q9NS87 1388 aa20.66■□□□□ 0.9
CDKN1A-208ENST00000615513 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDKN1A-208ENST00000615513 NUP155O75694 1391 aa20.64■□□□□ 0.89
CDKN1A-208ENST00000615513 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
CDKN1A-208ENST00000615513 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
CDKN1A-208ENST00000615513 SPATA31E1Q6ZUB1 1445 aa20.63■□□□□ 0.89
CDKN1A-208ENST00000615513 MYT1Q01538 1121 aa20.62■□□□□ 0.89
CDKN1A-208ENST00000615513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.62■□□□□ 0.89
CDKN1A-208ENST00000615513 MAST1Q9Y2H9 1570 aa20.61■□□□□ 0.89
CDKN1A-208ENST00000615513 UHRF1BP1LA0JNW5 1464 aa20.6■□□□□ 0.89
CDKN1A-208ENST00000615513 TTC37Q6PGP7 1564 aa20.6■□□□□ 0.89
CDKN1A-208ENST00000615513 PLEKHH2Q8IVE3 1493 aa20.6■□□□□ 0.89
CDKN1A-208ENST00000615513 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
CDKN1A-208ENST00000615513 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
CDKN1A-208ENST00000615513 ARHGAP5Q13017 1502 aa20.58■□□□□ 0.89
CDKN1A-208ENST00000615513 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
CDKN1A-208ENST00000615513 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
CDKN1A-208ENST00000615513 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
CDKN1A-208ENST00000615513 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
CDKN1A-208ENST00000615513 SUPT16HQ9Y5B9 1047 aaKnown RBP20.54■□□□□ 0.88
CDKN1A-208ENST00000615513 POLR1AO95602 1720 aaPredicted RBP20.53■□□□□ 0.88
CDKN1A-208ENST00000615513 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
CDKN1A-208ENST00000615513 PLXNC1O60486 1568 aa20.51■□□□□ 0.87
CDKN1A-208ENST00000615513 PLCH2O75038 1416 aa20.51■□□□□ 0.87
CDKN1A-208ENST00000615513 FAM135AQ9P2D6 1515 aa20.51■□□□□ 0.87
CDKN1A-208ENST00000615513 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
CDKN1A-208ENST00000615513 UNC13BO14795 1591 aa20.49■□□□□ 0.87
CDKN1A-208ENST00000615513 RALGAPBQ86X10 1494 aa20.48■□□□□ 0.87
CDKN1A-208ENST00000615513 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
CDKN1A-208ENST00000615513 USP47Q96K76 1375 aa20.46■□□□□ 0.87
CDKN1A-208ENST00000615513 ARID4BQ4LE39 1312 aaPredicted RBP20.46■□□□□ 0.87
CDKN1A-208ENST00000615513 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
CDKN1A-208ENST00000615513 KDM5CP41229 1560 aa20.44■□□□□ 0.86
CDKN1A-208ENST00000615513 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
CDKN1A-208ENST00000615513 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
CDKN1A-208ENST00000615513 ARAP3Q8WWN8 1544 aa20.43■□□□□ 0.86
CDKN1A-208ENST00000615513 ERBINQ96RT1 1412 aa20.42■□□□□ 0.86
CDKN1A-208ENST00000615513 ABCC1P33527 1531 aa20.41■□□□□ 0.86
CDKN1A-208ENST00000615513 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
CDKN1A-208ENST00000615513 IQGAP3Q86VI3 1631 aa20.4■□□□□ 0.86
CDKN1A-208ENST00000615513 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
CDKN1A-208ENST00000615513 CCDC144AA2RUR9 1427 aa20.39■□□□□ 0.85
CDKN1A-208ENST00000615513 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
CDKN1A-208ENST00000615513 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms