RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 SCAPERQ9BY12 1400 aa25.06■■□□□ 1.6
PDCD6-212ENST00000614778 PREX2Q70Z35 1606 aa25.06■■□□□ 1.6
PDCD6-212ENST00000614778 CDC42BPAQ5VT25 1732 aa25.06■■□□□ 1.6
PDCD6-212ENST00000614778 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
PDCD6-212ENST00000614778 MTUS2Q5JR59 1369 aa25.02■■□□□ 1.6
PDCD6-212ENST00000614778 POGZQ7Z3K3 1410 aa25.02■■□□□ 1.6
PDCD6-212ENST00000614778 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
PDCD6-212ENST00000614778 ARHGEF40Q8TER5 1519 aa24.99■■□□□ 1.59
PDCD6-212ENST00000614778 GPATCH8Q9UKJ3 1502 aaKnown RBP24.98■■□□□ 1.59
PDCD6-212ENST00000614778 EHBP1L1Q8N3D4 1523 aa24.97■■□□□ 1.59
PDCD6-212ENST00000614778 YEATS2Q9ULM3 1422 aa24.96■■□□□ 1.59
PDCD6-212ENST00000614778 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
PDCD6-212ENST00000614778 ARHGEF12Q9NZN5 1544 aa24.95■■□□□ 1.58
PDCD6-212ENST00000614778 ABCC1P33527 1531 aa24.94■■□□□ 1.58
PDCD6-212ENST00000614778 ZFYVE16Q7Z3T8 1539 aa24.93■■□□□ 1.58
PDCD6-212ENST00000614778 AFAP1Q8N556 730 aa24.92■■□□□ 1.58
PDCD6-212ENST00000614778 MAGI2Q86UL8 1455 aa24.91■■□□□ 1.58
PDCD6-212ENST00000614778 SAMD9LQ8IVG5 1584 aa24.91■■□□□ 1.58
PDCD6-212ENST00000614778 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
PDCD6-212ENST00000614778 ITSN2Q9NZM3 1697 aa24.91■■□□□ 1.58
PDCD6-212ENST00000614778 ZNF518AQ6AHZ1 1483 aa24.9■■□□□ 1.58
PDCD6-212ENST00000614778 KDM5CP41229 1560 aa24.9■■□□□ 1.58
PDCD6-212ENST00000614778 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.58
PDCD6-212ENST00000614778 TRAPPC8Q9Y2L5 1435 aa24.89■■□□□ 1.58
PDCD6-212ENST00000614778 ZNF777Q9ULD5 760 aaPredicted RBP24.89■■□□□ 1.58
PDCD6-212ENST00000614778 NCOA2Q15596 1464 aa24.85■■□□□ 1.57
PDCD6-212ENST00000614778 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
PDCD6-212ENST00000614778 CFDP1Q9UEE9 299 aaPredicted RBP24.85■■□□□ 1.57
PDCD6-212ENST00000614778 BCORL1Q5H9F3 1711 aa24.84■■□□□ 1.57
PDCD6-212ENST00000614778 SUPT6HQ7KZ85 1726 aaKnown RBP24.84■■□□□ 1.57
PDCD6-212ENST00000614778 SYCP2Q9BX26 1530 aa24.84■■□□□ 1.57
PDCD6-212ENST00000614778 ADAMTSL3P82987 1691 aa24.84■■□□□ 1.57
PDCD6-212ENST00000614778 ARID4BQ4LE39 1312 aaPredicted RBP24.84■■□□□ 1.57
PDCD6-212ENST00000614778 MAP3K1Q13233 1512 aa24.83■■□□□ 1.57
PDCD6-212ENST00000614778 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
PDCD6-212ENST00000614778 HECW2Q9P2P5 1572 aa24.83■■□□□ 1.57
PDCD6-212ENST00000614778 HNRNPMP52272 730 aaKnown RBP eCLIP24.8■■□□□ 1.562e-7■■■■■ 37.9
PDCD6-212ENST00000614778 ATP10AO60312 1499 aa24.8■■□□□ 1.56
PDCD6-212ENST00000614778 ZNF644Q9H582 1327 aaPredicted RBP24.8■■□□□ 1.56
PDCD6-212ENST00000614778 MLH3Q9UHC1 1453 aa24.79■■□□□ 1.56
PDCD6-212ENST00000614778 DIP2CQ9Y2E4 1556 aa24.78■■□□□ 1.56
PDCD6-212ENST00000614778 ABCA6Q8N139 1617 aa24.78■■□□□ 1.56
PDCD6-212ENST00000614778 KIAA1107Q9UPP5 1409 aa24.78■■□□□ 1.56
PDCD6-212ENST00000614778 KIDINS220Q9ULH0 1771 aa24.77■■□□□ 1.56
PDCD6-212ENST00000614778 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
PDCD6-212ENST00000614778 MADDQ8WXG6 1647 aa24.76■■□□□ 1.55
PDCD6-212ENST00000614778 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
PDCD6-212ENST00000614778 PLEKHH2Q8IVE3 1493 aa24.76■■□□□ 1.55
PDCD6-212ENST00000614778 MBD5Q9P267 1494 aa24.71■■□□□ 1.55
PDCD6-212ENST00000614778 PTPRMP28827 1452 aa24.7■■□□□ 1.55
PDCD6-212ENST00000614778 MLECQ14165 292 aa24.7■■□□□ 1.54
PDCD6-212ENST00000614778 SPAG9O60271 1321 aaKnown RBP24.69■■□□□ 1.54
PDCD6-212ENST00000614778 REREQ9P2R6 1566 aa24.69■■□□□ 1.54
PDCD6-212ENST00000614778 RIMS1Q86UR5 1692 aaKnown RBP24.69■■□□□ 1.54
PDCD6-212ENST00000614778 CAMSAP2Q08AD1 1489 aa24.68■■□□□ 1.54
PDCD6-212ENST00000614778 INO80Q9ULG1 1556 aaPredicted RBP24.67■■□□□ 1.54
PDCD6-212ENST00000614778 APLP2Q06481 763 aa24.66■■□□□ 1.54
PDCD6-212ENST00000614778 ATP7AQ04656 1500 aa24.66■■□□□ 1.54
PDCD6-212ENST00000614778 FER1L4A9Z1Z3 1794 aa24.62■■□□□ 1.53
PDCD6-212ENST00000614778 AGLP35573 1532 aa24.61■■□□□ 1.53
PDCD6-212ENST00000614778 MYOM3Q5VTT5 1437 aa24.61■■□□□ 1.53
PDCD6-212ENST00000614778 CCDC141Q6ZP82 1450 aa24.58■■□□□ 1.53
PDCD6-212ENST00000614778 ARHGEF5Q12774 1597 aa24.56■■□□□ 1.52
PDCD6-212ENST00000614778 MIA2Q96PC5 1412 aa24.56■■□□□ 1.52
PDCD6-212ENST00000614778 PLXNC1O60486 1568 aa24.54■■□□□ 1.52
PDCD6-212ENST00000614778 A2MP01023 1474 aa24.54■■□□□ 1.52
PDCD6-212ENST00000614778 PLPPR3Q6T4P5 718 aa24.54■■□□□ 1.52
PDCD6-212ENST00000614778 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
PDCD6-212ENST00000614778 ADGBQ8N7X0 1667 aa24.52■■□□□ 1.52
PDCD6-212ENST00000614778 RSPH4AQ5TD94 716 aa24.51■■□□□ 1.51
PDCD6-212ENST00000614778 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
PDCD6-212ENST00000614778 CEBPAP49715 358 aaPredicted RBP24.47■■□□□ 1.51
PDCD6-212ENST00000614778 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
PDCD6-212ENST00000614778 TSPY4P0CV99 314 aa24.44■■□□□ 1.5
PDCD6-212ENST00000614778 TSPY10P0CW01 314 aa24.44■■□□□ 1.5
PDCD6-212ENST00000614778 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
PDCD6-212ENST00000614778 MAST1Q9Y2H9 1570 aa24.43■■□□□ 1.5
PDCD6-212ENST00000614778 LMTK3Q96Q04 1460 aa24.42■■□□□ 1.5
PDCD6-212ENST00000614778 C3P01024 1663 aa24.42■■□□□ 1.5
PDCD6-212ENST00000614778 TCOF1Q13428 1488 aaKnown RBP24.41■■□□□ 1.5
PDCD6-212ENST00000614778 ABCC5O15440 1437 aa24.39■■□□□ 1.5
PDCD6-212ENST00000614778 GGT6Q6P531 493 aa24.38■■□□□ 1.49
PDCD6-212ENST00000614778 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
PDCD6-212ENST00000614778 CROCC2H7BZ55 1655 aa24.37■■□□□ 1.49
PDCD6-212ENST00000614778 CNTLNQ9NXG0 1405 aa24.36■■□□□ 1.49
PDCD6-212ENST00000614778 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
PDCD6-212ENST00000614778 CLTCQ00610 1675 aaKnown RBP24.36■■□□□ 1.49
PDCD6-212ENST00000614778 DNMT1P26358 1616 aaKnown RBP24.35■■□□□ 1.49
PDCD6-212ENST00000614778 DAPK1P53355 1430 aa24.35■■□□□ 1.49
PDCD6-212ENST00000614778 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
PDCD6-212ENST00000614778 KIF3BO15066 747 aa24.34■■□□□ 1.49
PDCD6-212ENST00000614778 SHANK2Q9UPX8 1470 aa24.32■■□□□ 1.48
PDCD6-212ENST00000614778 HSPA2P54652 639 aa24.31■■□□□ 1.48
PDCD6-212ENST00000614778 PREX1Q8TCU6 1659 aa24.3■■□□□ 1.48
PDCD6-212ENST00000614778 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
PDCD6-212ENST00000614778 SETD1BQ9UPS6 1966 aaKnown RBP24.3■■□□□ 1.48
PDCD6-212ENST00000614778 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
PDCD6-212ENST00000614778 PPP6R1Q9UPN7 881 aa24.27■■□□□ 1.48
PDCD6-212ENST00000614778 KIF15Q9NS87 1388 aa24.26■■□□□ 1.47
PDCD6-212ENST00000614778 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms